RNA–Protein interactions for RNA: ENST00000557434.5

LGMN-216, Transcript of legumain, humanhuman

TSL 5 BASIC

Gene LGMN, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-216ENST00000557434 NISCHQ9Y2I1 1504 aa40.66■■■■■ 4.1
LGMN-216ENST00000557434 CCDC180Q9P1Z9 1646 aa35.7■■■■□ 3.31
LGMN-216ENST00000557434 ABCC9O60706 1549 aa34.15■■■■□ 3.06
LGMN-216ENST00000557434 ZCCHC6Q5VYS8 1495 aaKnown RBP34.08■■■■□ 3.05
LGMN-216ENST00000557434 DCAF1Q9Y4B6 1507 aa33.63■■■□□ 2.97
LGMN-216ENST00000557434 DCAF8L2P0C7V8 631 aa33.57■■■□□ 2.96
LGMN-216ENST00000557434 MYO15BQ96JP2 1530 aa33.41■■■□□ 2.94
LGMN-216ENST00000557434 NACADO15069 1562 aa33.33■■■□□ 2.93
LGMN-216ENST00000557434 RB1CC1Q8TDY2 1594 aa33.13■■■□□ 2.89
LGMN-216ENST00000557434 SHROOM4Q9ULL8 1493 aa32.76■■■□□ 2.83
LGMN-216ENST00000557434 SCRIBQ14160 1630 aa32.75■■■□□ 2.83
LGMN-216ENST00000557434 UNC13AQ9UPW8 1703 aa32.6■■■□□ 2.81
LGMN-216ENST00000557434 BICRAQ9NZM4 1560 aa32.27■■■□□ 2.76
LGMN-216ENST00000557434 PABPN1Q86U42 306 aaKnown RBP eCLIP32.09■■■□□ 2.73
LGMN-216ENST00000557434 CECR2Q9BXF3 1484 aa31.67■■■□□ 2.66
LGMN-216ENST00000557434 MROH2BQ7Z745 1585 aa31.42■■■□□ 2.62
LGMN-216ENST00000557434 BAZ1AQ9NRL2 1556 aaPredicted RBP31.4■■■□□ 2.62
LGMN-216ENST00000557434 SMARCA4P51532 1647 aa31.38■■■□□ 2.61
LGMN-216ENST00000557434 RSF1Q96T23 1441 aaPredicted RBP31.36■■■□□ 2.61
LGMN-216ENST00000557434 EIF4G1Q04637 1599 aaKnown RBP31.27■■■□□ 2.6
LGMN-216ENST00000557434 SUPT5HO00267 1087 aaKnown RBP31.22■■■□□ 2.59
LGMN-216ENST00000557434 WIZO95785 1651 aa31.15■■■□□ 2.58
LGMN-216ENST00000557434 PEG3Q9GZU2 1588 aa31.04■■■□□ 2.56
LGMN-216ENST00000557434 ATAD2BQ9ULI0 1458 aa30.96■■■□□ 2.55
LGMN-216ENST00000557434 CC2D2AQ9P2K1 1620 aa30.94■■■□□ 2.54
LGMN-216ENST00000557434 SMARCA2P51531 1590 aa30.89■■■□□ 2.54
LGMN-216ENST00000557434 TOP2AP11388 1531 aaKnown RBP30.77■■■□□ 2.52
LGMN-216ENST00000557434 NCAPD3P42695 1498 aa30.77■■■□□ 2.52
LGMN-216ENST00000557434 BAZ1BQ9UIG0 1483 aaKnown RBP30.72■■■□□ 2.51
LGMN-216ENST00000557434 HMGXB3Q12766 1538 aa30.7■■■□□ 2.51
LGMN-216ENST00000557434 DNAJC5BQ9UF47 199 aa30.64■■■□□ 2.49
LGMN-216ENST00000557434 CCDC88BA6NC98 1476 aa30.45■■■□□ 2.47
LGMN-216ENST00000557434 CFTRP13569 1480 aa29.97■■■□□ 2.39
LGMN-216ENST00000557434 CADPSQ9ULU8 1353 aa29.92■■■□□ 2.38
LGMN-216ENST00000557434 NESP48681 1621 aa29.88■■■□□ 2.37
LGMN-216ENST00000557434 PRDM2Q13029 1718 aa29.82■■■□□ 2.36
LGMN-216ENST00000557434 LAMC3Q9Y6N6 1575 aa29.8■■■□□ 2.36
LGMN-216ENST00000557434 CHIC1Q5VXU3 224 aa29.69■■■□□ 2.34
LGMN-216ENST00000557434 ABCC8Q09428 1581 aa29.68■■■□□ 2.34
LGMN-216ENST00000557434 FANCD2Q9BXW9 1451 aa29.59■■■□□ 2.33
LGMN-216ENST00000557434 KIF21AQ7Z4S6 1674 aa29.54■■■□□ 2.32
LGMN-216ENST00000557434 PDS5BQ9NTI5 1447 aa29.51■■■□□ 2.32
LGMN-216ENST00000557434 WRNQ14191 1432 aaPredicted RBP eCLIP29.48■■■□□ 2.31
LGMN-216ENST00000557434 SYNJ1O43426 1573 aa29.46■■■□□ 2.31
LGMN-216ENST00000557434 CEP164Q9UPV0 1460 aa29.44■■■□□ 2.3
LGMN-216ENST00000557434 CUX1P39880 1505 aa29.42■■■□□ 2.3
LGMN-216ENST00000557434 TRIM41Q8WV44 630 aa29.36■■■□□ 2.29
LGMN-216ENST00000557434 TOP2BQ02880 1626 aa29.35■■■□□ 2.29
LGMN-216ENST00000557434 BIVM-ERCC5R4GMW8 1640 aa29.35■■■□□ 2.29
LGMN-216ENST00000557434 URB2Q14146 1524 aaKnown RBP29.31■■■□□ 2.28
LGMN-216ENST00000557434 DNMBPQ6XZF7 1577 aa29.26■■■□□ 2.27
LGMN-216ENST00000557434 ERCC6Q03468 1493 aa29.25■■■□□ 2.27
LGMN-216ENST00000557434 TOPBP1Q92547 1522 aa29.25■■■□□ 2.27
LGMN-216ENST00000557434 MRC2Q9UBG0 1479 aa29.21■■■□□ 2.27
LGMN-216ENST00000557434 THOC2Q8NI27 1593 aaKnown RBP29.19■■■□□ 2.26
LGMN-216ENST00000557434 FGD5Q6ZNL6 1462 aa29.13■■■□□ 2.25
LGMN-216ENST00000557434 WDR62O43379 1518 aa29.13■■■□□ 2.25
LGMN-216ENST00000557434 POLA1P09884 1462 aaPredicted RBP29.08■■■□□ 2.25
LGMN-216ENST00000557434 SOGA1O94964 1423 aa29■■■□□ 2.23
LGMN-216ENST00000557434 RAD54L2Q9Y4B4 1467 aa28.98■■■□□ 2.23
LGMN-216ENST00000557434 RUSC2Q8N2Y8 1516 aa28.96■■■□□ 2.23
LGMN-216ENST00000557434 CUX2O14529 1486 aa28.95■■■□□ 2.22
LGMN-216ENST00000557434 TARBP1Q13395 1621 aaKnown RBP28.9■■■□□ 2.22
LGMN-216ENST00000557434 WDR97A6NE52 1622 aa28.9■■■□□ 2.22
LGMN-216ENST00000557434 ABCA10Q8WWZ4 1543 aa28.86■■■□□ 2.21
LGMN-216ENST00000557434 FAM9AQ8IZU1 332 aaPredicted RBP28.83■■■□□ 2.21
LGMN-216ENST00000557434 IFT140Q96RY7 1462 aa28.76■■■□□ 2.19
LGMN-216ENST00000557434 EEA1Q15075 1411 aa28.74■■■□□ 2.19
LGMN-216ENST00000557434 KIF27Q86VH2 1401 aa28.74■■■□□ 2.19
LGMN-216ENST00000557434 ABCA5Q8WWZ7 1642 aa28.72■■■□□ 2.19
LGMN-216ENST00000557434 ZNF608Q9ULD9 1512 aaPredicted RBP28.69■■■□□ 2.18
LGMN-216ENST00000557434 TDRD9Q8NDG6 1382 aaKnown RBP28.69■■■□□ 2.18
LGMN-216ENST00000557434 CSRNP3Q8WYN3 585 aa28.64■■■□□ 2.18
LGMN-216ENST00000557434 AQRO60306 1485 aaKnown RBP eCLIP28.62■■■□□ 2.17
LGMN-216ENST00000557434 GAPVD1Q14C86 1478 aa28.61■■■□□ 2.17
LGMN-216ENST00000557434 IGF1RP08069 1367 aa28.6■■■□□ 2.17
LGMN-216ENST00000557434 EIF4G3O43432 1585 aaKnown RBP28.58■■■□□ 2.17
LGMN-216ENST00000557434 PBRM1Q86U86 1689 aa28.54■■■□□ 2.16
LGMN-216ENST00000557434 LOC105371045A0A1W2PR82 267 aa28.54■■■□□ 2.16
LGMN-216ENST00000557434 PRXQ9BXM0 1461 aa28.51■■■□□ 2.15
LGMN-216ENST00000557434 ERICH3Q5RHP9 1530 aa28.5■■■□□ 2.15
LGMN-216ENST00000557434 KIF21BO75037 1637 aa28.48■■■□□ 2.15
LGMN-216ENST00000557434 GRIN2BQ13224 1484 aa28.44■■■□□ 2.14
LGMN-216ENST00000557434 EHMT2Q96KQ7 1210 aa28.44■■■□□ 2.14
LGMN-216ENST00000557434 RAPGEF2Q9Y4G8 1499 aa28.43■■■□□ 2.14
LGMN-216ENST00000557434 CUL7Q14999 1698 aa28.41■■■□□ 2.14
LGMN-216ENST00000557434 CARMIL1Q5VZK9 1371 aa28.41■■■□□ 2.14
LGMN-216ENST00000557434 ADAMTS12P58397 1594 aa28.35■■■□□ 2.13
LGMN-216ENST00000557434 GOLGA3Q08378 1498 aa28.35■■■□□ 2.13
LGMN-216ENST00000557434 SNAPC4Q5SXM2 1469 aa28.34■■■□□ 2.13
LGMN-216ENST00000557434 MAGI1Q96QZ7 1491 aaPredicted RBP28.28■■■□□ 2.12
LGMN-216ENST00000557434 FHAD1B1AJZ9 1412 aa28.27■■■□□ 2.12
LGMN-216ENST00000557434 TNIKQ9UKE5 1360 aa28.17■■■□□ 2.1
LGMN-216ENST00000557434 UBTFP17480 764 aaKnown RBP28.17■■■□□ 2.1
LGMN-216ENST00000557434 SYNJ2O15056 1496 aa28.17■■■□□ 2.1
LGMN-216ENST00000557434 GRIN2AQ12879 1464 aa28.13■■■□□ 2.09
LGMN-216ENST00000557434 CHD1O14646 1710 aa28.08■■■□□ 2.08
LGMN-216ENST00000557434 CTTNBP2Q8WZ74 1663 aa28.06■■■□□ 2.08
LGMN-216ENST00000557434 CHMP7Q8WUX9 453 aaPredicted RBP28.04■■■□□ 2.08
LGMN-216ENST00000557434 CEP170Q5SW79 1584 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms