Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 DUX4L9-201ENST00000449051 1259 ntBASIC29.57■■■□□ 2.32
RFX7Q2KHR2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
RFX7Q2KHR2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
RFX7Q2KHR2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC29.56■■■□□ 2.32
RFX7Q2KHR2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
RFX7Q2KHR2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
RFX7Q2KHR2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC29.56■■■□□ 2.32
RFX7Q2KHR2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC29.56■■■□□ 2.32
RFX7Q2KHR2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC29.56■■■□□ 2.32
RFX7Q2KHR2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RFX7Q2KHR2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC29.55■■■□□ 2.32
RFX7Q2KHR2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
RFX7Q2KHR2 MIR3960-201ENST00000583311 91 ntBASIC29.55■■■□□ 2.32
RFX7Q2KHR2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC29.55■■■□□ 2.32
RFX7Q2KHR2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
RFX7Q2KHR2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
RFX7Q2KHR2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC29.54■■■□□ 2.32
RFX7Q2KHR2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC29.54■■■□□ 2.32
RFX7Q2KHR2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
RFX7Q2KHR2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
RFX7Q2KHR2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC29.54■■■□□ 2.32
RFX7Q2KHR2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
RFX7Q2KHR2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC29.54■■■□□ 2.32
RFX7Q2KHR2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.53■■■□□ 2.32
RFX7Q2KHR2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
RFX7Q2KHR2 DUX4L18-201ENST00000553347 1267 ntBASIC29.52■■■□□ 2.32
RFX7Q2KHR2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC29.52■■■□□ 2.32
RFX7Q2KHR2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
RFX7Q2KHR2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RFX7Q2KHR2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
RFX7Q2KHR2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC29.51■■■□□ 2.31
RFX7Q2KHR2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC29.51■■■□□ 2.31
RFX7Q2KHR2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RFX7Q2KHR2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
RFX7Q2KHR2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RFX7Q2KHR2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RFX7Q2KHR2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC29.5■■■□□ 2.31
RFX7Q2KHR2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RFX7Q2KHR2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC29.5■■■□□ 2.31
RFX7Q2KHR2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC29.5■■■□□ 2.31
RFX7Q2KHR2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC29.5■■■□□ 2.31
RFX7Q2KHR2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
RFX7Q2KHR2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
RFX7Q2KHR2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.49■■■□□ 2.31
RFX7Q2KHR2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RFX7Q2KHR2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC29.49■■■□□ 2.31
RFX7Q2KHR2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC29.49■■■□□ 2.31
RFX7Q2KHR2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RFX7Q2KHR2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC29.48■■■□□ 2.31
RFX7Q2KHR2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
RFX7Q2KHR2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC29.47■■■□□ 2.31
RFX7Q2KHR2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RFX7Q2KHR2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RFX7Q2KHR2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
RFX7Q2KHR2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
RFX7Q2KHR2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RFX7Q2KHR2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RFX7Q2KHR2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
RFX7Q2KHR2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
RFX7Q2KHR2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
RFX7Q2KHR2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC29.45■■■□□ 2.31
RFX7Q2KHR2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
RFX7Q2KHR2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC29.44■■■□□ 2.3
RFX7Q2KHR2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC29.44■■■□□ 2.3
RFX7Q2KHR2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RFX7Q2KHR2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC29.44■■■□□ 2.3
RFX7Q2KHR2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
RFX7Q2KHR2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC29.43■■■□□ 2.3
RFX7Q2KHR2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RFX7Q2KHR2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RFX7Q2KHR2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RFX7Q2KHR2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC29.4■■■□□ 2.3
RFX7Q2KHR2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RFX7Q2KHR2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC29.4■■■□□ 2.3
RFX7Q2KHR2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
RFX7Q2KHR2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC29.4■■■□□ 2.3
RFX7Q2KHR2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
RFX7Q2KHR2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RFX7Q2KHR2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
RFX7Q2KHR2 AC092803.2-201ENST00000564287 1899 ntBASIC29.38■■■□□ 2.29
RFX7Q2KHR2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RFX7Q2KHR2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RFX7Q2KHR2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC29.38■■■□□ 2.29
RFX7Q2KHR2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC29.38■■■□□ 2.29
RFX7Q2KHR2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC29.38■■■□□ 2.29
RFX7Q2KHR2 AC091060.1-201ENST00000623524 1766 ntBASIC29.37■■■□□ 2.29
RFX7Q2KHR2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RFX7Q2KHR2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.37■■■□□ 2.29
RFX7Q2KHR2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RFX7Q2KHR2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
RFX7Q2KHR2 MIR6765-201ENST00000614092 87 ntBASIC29.36■■■□□ 2.29
RFX7Q2KHR2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RFX7Q2KHR2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC29.35■■■□□ 2.29
RFX7Q2KHR2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
RFX7Q2KHR2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
RFX7Q2KHR2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
RFX7Q2KHR2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC29.35■■■□□ 2.29
RFX7Q2KHR2 DUSP8P4-201ENST00000399538 1761 ntBASIC29.34■■■□□ 2.29
RFX7Q2KHR2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC29.34■■■□□ 2.29
RFX7Q2KHR2 AL451085.2-201ENST00000605085 799 ntBASIC29.34■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms