Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
EIF4A1P60842 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
EIF4A1P60842 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
EIF4A1P60842 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
EIF4A1P60842 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.35■■■□□ 2.61
EIF4A1P60842 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.35■■■□□ 2.61
EIF4A1P60842 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC31.34■■■□□ 2.61
EIF4A1P60842 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.34■■■□□ 2.61
EIF4A1P60842 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
EIF4A1P60842 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.34■■■□□ 2.61
EIF4A1P60842 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
EIF4A1P60842 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
EIF4A1P60842 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.33■■■□□ 2.61
EIF4A1P60842 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
EIF4A1P60842 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
EIF4A1P60842 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC31.32■■■□□ 2.6
EIF4A1P60842 AC087393.1-201ENST00000582896 145 ntBASIC31.32■■■□□ 2.6
EIF4A1P60842 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
EIF4A1P60842 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.31■■■□□ 2.6
EIF4A1P60842 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
EIF4A1P60842 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
EIF4A1P60842 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
EIF4A1P60842 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
EIF4A1P60842 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.3■■■□□ 2.6
EIF4A1P60842 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.3■■■□□ 2.6
EIF4A1P60842 KRT8P33-201ENST00000508125 1423 ntBASIC31.3■■■□□ 2.6
EIF4A1P60842 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
EIF4A1P60842 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
EIF4A1P60842 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
EIF4A1P60842 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.28■■■□□ 2.6
EIF4A1P60842 RPS2P7-201ENST00000447334 885 ntBASIC31.28■■■□□ 2.6
EIF4A1P60842 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
EIF4A1P60842 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.27■■■□□ 2.6
EIF4A1P60842 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
EIF4A1P60842 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
EIF4A1P60842 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
EIF4A1P60842 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.26■■■□□ 2.59
EIF4A1P60842 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
EIF4A1P60842 AL451085.2-201ENST00000605085 799 ntBASIC31.26■■■□□ 2.59
EIF4A1P60842 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.59
EIF4A1P60842 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.25■■■□□ 2.59
EIF4A1P60842 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
EIF4A1P60842 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
EIF4A1P60842 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
EIF4A1P60842 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
EIF4A1P60842 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
EIF4A1P60842 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.25■■■□□ 2.59
EIF4A1P60842 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
EIF4A1P60842 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
EIF4A1P60842 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.25■■■□□ 2.59
EIF4A1P60842 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.24■■■□□ 2.59
EIF4A1P60842 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.24■■■□□ 2.59
EIF4A1P60842 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
EIF4A1P60842 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC31.24■■■□□ 2.59
EIF4A1P60842 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
EIF4A1P60842 MIR4508-201ENST00000584178 70 ntBASIC31.23■■■□□ 2.59
EIF4A1P60842 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
EIF4A1P60842 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
EIF4A1P60842 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
EIF4A1P60842 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.22■■■□□ 2.59
EIF4A1P60842 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
EIF4A1P60842 AC019171.1-201ENST00000601251 1056 ntBASIC31.22■■■□□ 2.59
EIF4A1P60842 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
EIF4A1P60842 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
EIF4A1P60842 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
EIF4A1P60842 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
EIF4A1P60842 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
EIF4A1P60842 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.2■■■□□ 2.59
EIF4A1P60842 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.2■■■□□ 2.59
EIF4A1P60842 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
EIF4A1P60842 LONRF2P2-201ENST00000439212 571 ntBASIC31.2■■■□□ 2.59
EIF4A1P60842 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.19■■■□□ 2.58
EIF4A1P60842 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
EIF4A1P60842 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
EIF4A1P60842 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
EIF4A1P60842 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
EIF4A1P60842 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
EIF4A1P60842 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
EIF4A1P60842 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
EIF4A1P60842 AL035685.1-201ENST00000636663 812 ntBASIC31.17■■■□□ 2.58
EIF4A1P60842 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.17■■■□□ 2.58
EIF4A1P60842 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
EIF4A1P60842 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
EIF4A1P60842 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
EIF4A1P60842 YBX1P4-201ENST00000392794 808 ntBASIC31.16■■■□□ 2.58
EIF4A1P60842 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.16■■■□□ 2.58
EIF4A1P60842 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.16■■■□□ 2.58
EIF4A1P60842 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.16■■■□□ 2.58
EIF4A1P60842 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
EIF4A1P60842 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
EIF4A1P60842 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
EIF4A1P60842 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
EIF4A1P60842 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
EIF4A1P60842 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
EIF4A1P60842 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
EIF4A1P60842 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
EIF4A1P60842 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
EIF4A1P60842 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
EIF4A1P60842 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.14■■■□□ 2.58
EIF4A1P60842 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms