Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL8A2P25067 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL8A2P25067 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL8A2P25067 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL8A2P25067 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL8A2P25067 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.47■□□□□ 0.87
COL8A2P25067 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL8A2P25067 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
COL8A2P25067 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL8A2P25067 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL8A2P25067 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.46■□□□□ 0.87
COL8A2P25067 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL8A2P25067 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL8A2P25067 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL8A2P25067 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL8A2P25067 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL8A2P25067 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL8A2P25067 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
COL8A2P25067 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL8A2P25067 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL8A2P25067 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL8A2P25067 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
COL8A2P25067 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL8A2P25067 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.44■□□□□ 0.86
COL8A2P25067 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.44■□□□□ 0.86
COL8A2P25067 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL8A2P25067 AC074183.2-201ENST00000623112 922 ntBASIC20.43■□□□□ 0.86
COL8A2P25067 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL8A2P25067 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
COL8A2P25067 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL8A2P25067 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL8A2P25067 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.42■□□□□ 0.86
COL8A2P25067 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.42■□□□□ 0.86
COL8A2P25067 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL8A2P25067 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL8A2P25067 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL8A2P25067 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.42■□□□□ 0.86
COL8A2P25067 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL8A2P25067 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.41■□□□□ 0.86
COL8A2P25067 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL8A2P25067 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL8A2P25067 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.41■□□□□ 0.86
COL8A2P25067 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL8A2P25067 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL8A2P25067 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL8A2P25067 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL8A2P25067 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
COL8A2P25067 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL8A2P25067 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.4■□□□□ 0.86
COL8A2P25067 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL8A2P25067 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.4■□□□□ 0.86
COL8A2P25067 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.4■□□□□ 0.86
COL8A2P25067 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL8A2P25067 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
COL8A2P25067 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
COL8A2P25067 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.4■□□□□ 0.86
COL8A2P25067 PVT1_1.1-201ENST00000615125 194 ntBASIC20.4■□□□□ 0.86
COL8A2P25067 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
COL8A2P25067 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL8A2P25067 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL8A2P25067 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL8A2P25067 KRT8P33-201ENST00000508125 1423 ntBASIC20.39■□□□□ 0.85
COL8A2P25067 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.39■□□□□ 0.85
COL8A2P25067 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.39■□□□□ 0.85
COL8A2P25067 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL8A2P25067 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL8A2P25067 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.39■□□□□ 0.85
COL8A2P25067 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL8A2P25067 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
COL8A2P25067 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL8A2P25067 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.38■□□□□ 0.85
COL8A2P25067 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.38■□□□□ 0.85
COL8A2P25067 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL8A2P25067 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL8A2P25067 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.38■□□□□ 0.85
COL8A2P25067 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL8A2P25067 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
COL8A2P25067 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.38■□□□□ 0.85
COL8A2P25067 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL8A2P25067 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.38■□□□□ 0.85
COL8A2P25067 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL8A2P25067 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL8A2P25067 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL8A2P25067 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.37■□□□□ 0.85
COL8A2P25067 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.37■□□□□ 0.85
COL8A2P25067 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL8A2P25067 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL8A2P25067 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL8A2P25067 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL8A2P25067 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.36■□□□□ 0.85
COL8A2P25067 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.35■□□□□ 0.85
COL8A2P25067 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.35■□□□□ 0.85
COL8A2P25067 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL8A2P25067 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.35■□□□□ 0.85
COL8A2P25067 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL8A2P25067 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.35■□□□□ 0.85
COL8A2P25067 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.35■□□□□ 0.85
COL8A2P25067 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL8A2P25067 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL8A2P25067 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms