Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TPM3P06753 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TPM3P06753 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TPM3P06753 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.39■□□□□ 0.69
TPM3P06753 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.39■□□□□ 0.69
TPM3P06753 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPM3P06753 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPM3P06753 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TPM3P06753 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TPM3P06753 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.38■□□□□ 0.69
TPM3P06753 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TPM3P06753 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TPM3P06753 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TPM3P06753 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TPM3P06753 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TPM3P06753 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TPM3P06753 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TPM3P06753 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
TPM3P06753 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TPM3P06753 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TPM3P06753 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TPM3P06753 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.38■□□□□ 0.69
TPM3P06753 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TPM3P06753 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TPM3P06753 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TPM3P06753 AC098590.1-201ENST00000468126 897 ntBASIC19.38■□□□□ 0.69
TPM3P06753 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.38■□□□□ 0.69
TPM3P06753 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TPM3P06753 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.38■□□□□ 0.69
TPM3P06753 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.38■□□□□ 0.69
TPM3P06753 AC009154.2-201ENST00000621177 724 ntBASIC19.38■□□□□ 0.69
TPM3P06753 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TPM3P06753 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.38■□□□□ 0.69
TPM3P06753 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TPM3P06753 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TPM3P06753 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC19.37■□□□□ 0.69
TPM3P06753 RNF216P1-203ENST00000404404 2427 ntBASIC19.37■□□□□ 0.69
TPM3P06753 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.37■□□□□ 0.69
TPM3P06753 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM3P06753 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TPM3P06753 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TPM3P06753 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TPM3P06753 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM3P06753 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.37■□□□□ 0.69
TPM3P06753 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.37■□□□□ 0.69
TPM3P06753 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM3P06753 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.37■□□□□ 0.69
TPM3P06753 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM3P06753 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM3P06753 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM3P06753 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM3P06753 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
TPM3P06753 AC034232.1-201ENST00000506026 1064 ntBASIC19.37■□□□□ 0.69
TPM3P06753 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
TPM3P06753 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.37■□□□□ 0.69
TPM3P06753 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.37■□□□□ 0.69
TPM3P06753 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.37■□□□□ 0.69
TPM3P06753 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.37■□□□□ 0.69
TPM3P06753 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.37■□□□□ 0.69
TPM3P06753 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.37■□□□□ 0.69
TPM3P06753 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.37■□□□□ 0.69
TPM3P06753 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TPM3P06753 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TPM3P06753 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM3P06753 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TPM3P06753 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TPM3P06753 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TPM3P06753 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.36■□□□□ 0.69
TPM3P06753 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TPM3P06753 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
TPM3P06753 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
TPM3P06753 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.36■□□□□ 0.69
TPM3P06753 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.36■□□□□ 0.69
TPM3P06753 TSPY20P-201ENST00000450910 630 ntBASIC19.36■□□□□ 0.69
TPM3P06753 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.36■□□□□ 0.69
TPM3P06753 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
TPM3P06753 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.36■□□□□ 0.69
TPM3P06753 Z99916.2-201ENST00000604037 246 ntBASIC19.36■□□□□ 0.69
TPM3P06753 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.36■□□□□ 0.69
TPM3P06753 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TPM3P06753 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TPM3P06753 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TPM3P06753 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TPM3P06753 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms