RNA–Protein interactions for RNA: ENST00000394546.6

TRPT1-202, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRPT1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-202ENST00000394546 NISCHQ9Y2I1 1504 aa45.78■■■■■ 4.92
TRPT1-202ENST00000394546 CCDC180Q9P1Z9 1646 aa40.77■■■■■ 4.12
TRPT1-202ENST00000394546 ABCC9O60706 1549 aa40.13■■■■■ 4.01
TRPT1-202ENST00000394546 RB1CC1Q8TDY2 1594 aa38.55■■■■□ 3.76
TRPT1-202ENST00000394546 DCAF8L2P0C7V8 631 aa38.48■■■■□ 3.75
TRPT1-202ENST00000394546 NACADO15069 1562 aa38.46■■■■□ 3.75
TRPT1-202ENST00000394546 MYO15BQ96JP2 1530 aa38.16■■■■□ 3.7
TRPT1-202ENST00000394546 ZCCHC6Q5VYS8 1495 aaKnown RBP38.06■■■■□ 3.68
TRPT1-202ENST00000394546 DCAF1Q9Y4B6 1507 aa37.9■■■■□ 3.66
TRPT1-202ENST00000394546 PABPN1Q86U42 306 aaKnown RBP eCLIP37.5■■■■□ 3.59
TRPT1-202ENST00000394546 UNC13AQ9UPW8 1703 aa37.47■■■■□ 3.59
TRPT1-202ENST00000394546 BICRAQ9NZM4 1560 aa37.26■■■■□ 3.56
TRPT1-202ENST00000394546 SCRIBQ14160 1630 aa37.16■■■■□ 3.54
TRPT1-202ENST00000394546 SHROOM4Q9ULL8 1493 aa37.01■■■■□ 3.52
TRPT1-202ENST00000394546 DNAJC5BQ9UF47 199 aa37■■■■□ 3.51
TRPT1-202ENST00000394546 EIF4G1Q04637 1599 aaKnown RBP36.36■■■■□ 3.41
TRPT1-202ENST00000394546 CC2D2AQ9P2K1 1620 aa36.26■■■■□ 3.39
TRPT1-202ENST00000394546 CECR2Q9BXF3 1484 aa36.12■■■■□ 3.37
TRPT1-202ENST00000394546 BAZ1AQ9NRL2 1556 aaPredicted RBP35.53■■■■□ 3.28
TRPT1-202ENST00000394546 SMARCA4P51532 1647 aa35.53■■■■□ 3.28
TRPT1-202ENST00000394546 NCAPD3P42695 1498 aa35.49■■■■□ 3.27
TRPT1-202ENST00000394546 ATAD2BQ9ULI0 1458 aa35.45■■■■□ 3.27
TRPT1-202ENST00000394546 SMARCA2P51531 1590 aa35.42■■■■□ 3.26
TRPT1-202ENST00000394546 HMGXB3Q12766 1538 aa35.26■■■■□ 3.23
TRPT1-202ENST00000394546 MROH2BQ7Z745 1585 aa35.23■■■■□ 3.23
TRPT1-202ENST00000394546 PEG3Q9GZU2 1588 aa35.21■■■■□ 3.23
TRPT1-202ENST00000394546 BAZ1BQ9UIG0 1483 aaKnown RBP35.16■■■■□ 3.22
TRPT1-202ENST00000394546 WIZO95785 1651 aa34.81■■■■□ 3.16
TRPT1-202ENST00000394546 RSF1Q96T23 1441 aaPredicted RBP34.8■■■■□ 3.16
TRPT1-202ENST00000394546 ERCC6Q03468 1493 aa34.69■■■■□ 3.14
TRPT1-202ENST00000394546 NESP48681 1621 aa34.61■■■■□ 3.13
TRPT1-202ENST00000394546 LAMC3Q9Y6N6 1575 aa34.57■■■■□ 3.12
TRPT1-202ENST00000394546 TOP2AP11388 1531 aaKnown RBP34.5■■■■□ 3.11
TRPT1-202ENST00000394546 CADPSQ9ULU8 1353 aa34.47■■■■□ 3.11
TRPT1-202ENST00000394546 PDS5BQ9NTI5 1447 aa34.43■■■■□ 3.1
TRPT1-202ENST00000394546 CUX2O14529 1486 aa34.39■■■■□ 3.1
TRPT1-202ENST00000394546 CFTRP13569 1480 aa34.18■■■■□ 3.06
TRPT1-202ENST00000394546 KIF21AQ7Z4S6 1674 aa34.15■■■■□ 3.06
TRPT1-202ENST00000394546 THOC2Q8NI27 1593 aaKnown RBP34.11■■■■□ 3.05
TRPT1-202ENST00000394546 CCDC88BA6NC98 1476 aa34.1■■■■□ 3.05
TRPT1-202ENST00000394546 FANCD2Q9BXW9 1451 aa34.03■■■■□ 3.04
TRPT1-202ENST00000394546 CEP164Q9UPV0 1460 aa34.02■■■■□ 3.04
TRPT1-202ENST00000394546 MRC2Q9UBG0 1479 aa34.01■■■■□ 3.04
TRPT1-202ENST00000394546 WDR62O43379 1518 aa33.86■■■■□ 3.01
TRPT1-202ENST00000394546 SUPT5HO00267 1087 aaKnown RBP33.82■■■■□ 3
TRPT1-202ENST00000394546 PRDM2Q13029 1718 aa33.79■■■■□ 3
TRPT1-202ENST00000394546 URB2Q14146 1524 aaKnown RBP33.65■■■□□ 2.98
TRPT1-202ENST00000394546 DNAJC5Q9H3Z4 198 aa33.62■■■□□ 2.97
TRPT1-202ENST00000394546 ABCC8Q09428 1581 aa33.54■■■□□ 2.96
TRPT1-202ENST00000394546 TOPBP1Q92547 1522 aa33.44■■■□□ 2.94
TRPT1-202ENST00000394546 DNMBPQ6XZF7 1577 aa33.38■■■□□ 2.93
TRPT1-202ENST00000394546 IFT140Q96RY7 1462 aa33.34■■■□□ 2.93
TRPT1-202ENST00000394546 POLA1P09884 1462 aaPredicted RBP33.13■■■□□ 2.89
TRPT1-202ENST00000394546 ZNF608Q9ULD9 1512 aaPredicted RBP33.12■■■□□ 2.89
TRPT1-202ENST00000394546 SOGA1O94964 1423 aa33.07■■■□□ 2.88
TRPT1-202ENST00000394546 CUX1P39880 1505 aa33.07■■■□□ 2.88
TRPT1-202ENST00000394546 TARBP1Q13395 1621 aaKnown RBP33.04■■■□□ 2.88
TRPT1-202ENST00000394546 FGD5Q6ZNL6 1462 aa33.02■■■□□ 2.88
TRPT1-202ENST00000394546 OSCARQ8IYS5 282 aa33■■■□□ 2.87
TRPT1-202ENST00000394546 RAD54L2Q9Y4B4 1467 aa32.99■■■□□ 2.87
TRPT1-202ENST00000394546 EIF4G3O43432 1585 aaKnown RBP32.96■■■□□ 2.87
TRPT1-202ENST00000394546 AQRO60306 1485 aaKnown RBP eCLIP32.95■■■□□ 2.876e-9■■■■■ 37.6
TRPT1-202ENST00000394546 TDRD9Q8NDG6 1382 aaKnown RBP32.88■■■□□ 2.85
TRPT1-202ENST00000394546 WDR97A6NE52 1622 aa32.86■■■□□ 2.85
TRPT1-202ENST00000394546 WRNQ14191 1432 aaPredicted RBP eCLIP32.85■■■□□ 2.85
TRPT1-202ENST00000394546 TOP2BQ02880 1626 aa32.75■■■□□ 2.83
TRPT1-202ENST00000394546 ABCA10Q8WWZ4 1543 aa32.72■■■□□ 2.83
TRPT1-202ENST00000394546 BIVM-ERCC5R4GMW8 1640 aa32.71■■■□□ 2.83
TRPT1-202ENST00000394546 FBLN2P98095 1184 aa32.71■■■□□ 2.83
TRPT1-202ENST00000394546 GRIN2BQ13224 1484 aa32.7■■■□□ 2.83
TRPT1-202ENST00000394546 SYNJ1O43426 1573 aa32.67■■■□□ 2.82
TRPT1-202ENST00000394546 GAPVD1Q14C86 1478 aa32.66■■■□□ 2.82
TRPT1-202ENST00000394546 SNAPC4Q5SXM2 1469 aa32.63■■■□□ 2.81
TRPT1-202ENST00000394546 MAGI1Q96QZ7 1491 aaPredicted RBP32.63■■■□□ 2.81
TRPT1-202ENST00000394546 CHMP7Q8WUX9 453 aaPredicted RBP32.6■■■□□ 2.81
TRPT1-202ENST00000394546 CHD1O14646 1710 aa32.55■■■□□ 2.8
TRPT1-202ENST00000394546 ABCA5Q8WWZ7 1642 aa32.54■■■□□ 2.8
TRPT1-202ENST00000394546 SYNJ2O15056 1496 aa32.5■■■□□ 2.79
TRPT1-202ENST00000394546 PBRM1Q86U86 1689 aa32.49■■■□□ 2.79
TRPT1-202ENST00000394546 TRIM41Q8WV44 630 aa32.42■■■□□ 2.78
TRPT1-202ENST00000394546 ERICH3Q5RHP9 1530 aa32.34■■■□□ 2.77
TRPT1-202ENST00000394546 ARHGEF11O15085 1522 aa32.33■■■□□ 2.77
TRPT1-202ENST00000394546 RIMBP3CA6NJZ7 1639 aa32.32■■■□□ 2.76
TRPT1-202ENST00000394546 RIMBP3BA6NNM3 1639 aa32.32■■■□□ 2.76
TRPT1-202ENST00000394546 RIMBP3Q9UFD9 1639 aa32.32■■■□□ 2.76
TRPT1-202ENST00000394546 FHAD1B1AJZ9 1412 aa32.3■■■□□ 2.76
TRPT1-202ENST00000394546 ADAMTS12P58397 1594 aa32.25■■■□□ 2.75
TRPT1-202ENST00000394546 CLASP1Q7Z460 1538 aa32.25■■■□□ 2.75
TRPT1-202ENST00000394546 GRIN2AQ12879 1464 aa32.24■■■□□ 2.75
TRPT1-202ENST00000394546 KIF27Q86VH2 1401 aa32.24■■■□□ 2.75
TRPT1-202ENST00000394546 CYB5RLQ6IPT4 315 aa32.14■■■□□ 2.74
TRPT1-202ENST00000394546 NUP160Q12769 1436 aa32.1■■■□□ 2.73
TRPT1-202ENST00000394546 IGF1RP08069 1367 aa32.09■■■□□ 2.73
TRPT1-202ENST00000394546 ARAP1Q96P48 1450 aa32.03■■■□□ 2.72
TRPT1-202ENST00000394546 CEP170Q5SW79 1584 aa32.02■■■□□ 2.72
TRPT1-202ENST00000394546 CUL7Q14999 1698 aa31.98■■■□□ 2.71
TRPT1-202ENST00000394546 CARMIL1Q5VZK9 1371 aa31.93■■■□□ 2.7
TRPT1-202ENST00000394546 JPH4Q96JJ6 628 aa31.87■■■□□ 2.69
TRPT1-202ENST00000394546 SHROOM2Q13796 1616 aa31.83■■■□□ 2.69
TRPT1-202ENST00000394546 KIAA0586Q9BVV6 1533 aa31.79■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms