RNA–Protein interactions for RNA: ENST00000312210.9

MINDY1-201, Transcript of MINDY lysine 48 deubiquitinase 1, humanhuman

TSL 2 BASIC

Gene MINDY1, Length 2,400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY1-201ENST00000312210 NISCHQ9Y2I1 1504 aa32.96■■■□□ 2.87
MINDY1-201ENST00000312210 SHROOM4Q9ULL8 1493 aa28.57■■■□□ 2.16
MINDY1-201ENST00000312210 SUPT5HO00267 1087 aaKnown RBP28.16■■■□□ 2.1
MINDY1-201ENST00000312210 ZCCHC6Q5VYS8 1495 aaKnown RBP27.94■■■□□ 2.06
MINDY1-201ENST00000312210 CCDC180Q9P1Z9 1646 aa27.79■■■□□ 2.04
MINDY1-201ENST00000312210 MYO15BQ96JP2 1530 aa27.48■■□□□ 1.99
MINDY1-201ENST00000312210 DCAF8L2P0C7V8 631 aa27.47■■□□□ 1.99
MINDY1-201ENST00000312210 CHIC1Q5VXU3 224 aa27.46■■□□□ 1.99
MINDY1-201ENST00000312210 HRCP23327 699 aa27.17■■□□□ 1.94
MINDY1-201ENST00000312210 PCGF6Q9BYE7 350 aa27.01■■□□□ 1.92
MINDY1-201ENST00000312210 DCAF1Q9Y4B6 1507 aa26.92■■□□□ 1.9
MINDY1-201ENST00000312210 LOC105371045A0A1W2PR82 267 aa26.76■■□□□ 1.87
MINDY1-201ENST00000312210 PPARGC1BQ86YN6 1023 aaKnown RBP26.7■■□□□ 1.86
MINDY1-201ENST00000312210 ABCC9O60706 1549 aa26.41■■□□□ 1.82
MINDY1-201ENST00000312210 TRIM26Q12899 539 aaPredicted RBP26.32■■□□□ 1.8
MINDY1-201ENST00000312210 RSF1Q96T23 1441 aaPredicted RBP26.27■■□□□ 1.8
MINDY1-201ENST00000312210 SCRIBQ14160 1630 aa26.24■■□□□ 1.79
MINDY1-201ENST00000312210 TRIM41Q8WV44 630 aa26.13■■□□□ 1.77
MINDY1-201ENST00000312210 RB1CC1Q8TDY2 1594 aa26.05■■□□□ 1.76
MINDY1-201ENST00000312210 FAM9AQ8IZU1 332 aaPredicted RBP26.05■■□□□ 1.76
MINDY1-201ENST00000312210 EHMT2Q96KQ7 1210 aa25.9■■□□□ 1.74
MINDY1-201ENST00000312210 ZEB1P37275 1124 aaPredicted RBP25.81■■□□□ 1.72
MINDY1-201ENST00000312210 CECR2Q9BXF3 1484 aa25.8■■□□□ 1.72
MINDY1-201ENST00000312210 NACADO15069 1562 aa25.76■■□□□ 1.71
MINDY1-201ENST00000312210 MROH2BQ7Z745 1585 aa25.71■■□□□ 1.71
MINDY1-201ENST00000312210 WIZO95785 1651 aa25.57■■□□□ 1.68
MINDY1-201ENST00000312210 BAZ1AQ9NRL2 1556 aaPredicted RBP25.35■■□□□ 1.65
MINDY1-201ENST00000312210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.32■■□□□ 1.64
MINDY1-201ENST00000312210 EIF4G1Q04637 1599 aaKnown RBP25.31■■□□□ 1.64
MINDY1-201ENST00000312210 SCAF1Q9H7N4 1312 aaKnown RBP25.3■■□□□ 1.64
MINDY1-201ENST00000312210 CCER1Q8TC90 406 aaPredicted RBP25.22■■□□□ 1.63
MINDY1-201ENST00000312210 ABCC8Q09428 1581 aa25.18■■□□□ 1.62
MINDY1-201ENST00000312210 CCDC88BA6NC98 1476 aa25.15■■□□□ 1.62
MINDY1-201ENST00000312210 TTBK1Q5TCY1 1321 aaPredicted RBP25.14■■□□□ 1.62
MINDY1-201ENST00000312210 TOP2AP11388 1531 aaKnown RBP25.1■■□□□ 1.61
MINDY1-201ENST00000312210 UNC13AQ9UPW8 1703 aa25.08■■□□□ 1.61
MINDY1-201ENST00000312210 SOGA1O94964 1423 aa25.03■■□□□ 1.6
MINDY1-201ENST00000312210 CEP162Q5TB80 1403 aa25.02■■□□□ 1.6
MINDY1-201ENST00000312210 SMARCA4P51532 1647 aa25.01■■□□□ 1.59
MINDY1-201ENST00000312210 SMARCA2P51531 1590 aa25.01■■□□□ 1.59
MINDY1-201ENST00000312210 WRNQ14191 1432 aaPredicted RBP eCLIP25.01■■□□□ 1.59
MINDY1-201ENST00000312210 PELP1Q8IZL8 1130 aaKnown RBP24.96■■□□□ 1.59
MINDY1-201ENST00000312210 PABPN1Q86U42 306 aaKnown RBP eCLIP24.93■■□□□ 1.58
MINDY1-201ENST00000312210 TNIKQ9UKE5 1360 aa24.91■■□□□ 1.58
MINDY1-201ENST00000312210 RUSC2Q8N2Y8 1516 aa24.9■■□□□ 1.58
MINDY1-201ENST00000312210 ACIN1Q9UKV3 1341 aaKnown RBP24.9■■□□□ 1.58
MINDY1-201ENST00000312210 NEUROD1Q13562 356 aa24.9■■□□□ 1.58
MINDY1-201ENST00000312210 DIEXFQ68CQ4 756 aaKnown RBP24.9■■□□□ 1.58
MINDY1-201ENST00000312210 CSRNP3Q8WYN3 585 aa24.87■■□□□ 1.57
MINDY1-201ENST00000312210 UBTFP17480 764 aaKnown RBP24.86■■□□□ 1.57
MINDY1-201ENST00000312210 EEA1Q15075 1411 aa24.78■■□□□ 1.56
MINDY1-201ENST00000312210 BICRAQ9NZM4 1560 aa24.77■■□□□ 1.56
MINDY1-201ENST00000312210 GOLGA3Q08378 1498 aa24.71■■□□□ 1.55
MINDY1-201ENST00000312210 GTF3C3Q9Y5Q9 886 aa24.66■■□□□ 1.54
MINDY1-201ENST00000312210 CENPBP07199 599 aaPredicted RBP24.65■■□□□ 1.54
MINDY1-201ENST00000312210 ZNF316A6NFI3 1004 aaPredicted RBP24.6■■□□□ 1.53
MINDY1-201ENST00000312210 HNRNPUL2Q1KMD3 747 aaKnown RBP24.55■■□□□ 1.52
MINDY1-201ENST00000312210 SYNJ1O43426 1573 aa24.52■■□□□ 1.52
MINDY1-201ENST00000312210 CEP164Q9UPV0 1460 aa24.51■■□□□ 1.51
MINDY1-201ENST00000312210 CLIP1P30622 1438 aa24.48■■□□□ 1.51
MINDY1-201ENST00000312210 PEG3Q9GZU2 1588 aa24.45■■□□□ 1.5
MINDY1-201ENST00000312210 KIF21BO75037 1637 aa24.43■■□□□ 1.5
MINDY1-201ENST00000312210 YTHDC1Q96MU7 727 aaKnown RBP24.42■■□□□ 1.5
MINDY1-201ENST00000312210 RANGAP1P46060 587 aaPredicted RBP24.41■■□□□ 1.5
MINDY1-201ENST00000312210 VPS8Q8N3P4 1428 aa24.39■■□□□ 1.49
MINDY1-201ENST00000312210 RAPGEF2Q9Y4G8 1499 aa24.37■■□□□ 1.49
MINDY1-201ENST00000312210 MIER1Q8N108 512 aa24.35■■□□□ 1.49
MINDY1-201ENST00000312210 ATAD2BQ9ULI0 1458 aa24.35■■□□□ 1.49
MINDY1-201ENST00000312210 APLP2Q06481 763 aa24.32■■□□□ 1.48
MINDY1-201ENST00000312210 BAZ1BQ9UIG0 1483 aaKnown RBP24.28■■□□□ 1.48
MINDY1-201ENST00000312210 TOP2BQ02880 1626 aa24.12■■□□□ 1.45
MINDY1-201ENST00000312210 KANK4Q5T7N3 995 aaPredicted RBP24.05■■□□□ 1.44
MINDY1-201ENST00000312210 DHX57Q6P158 1386 aaKnown RBP24.04■■□□□ 1.44
MINDY1-201ENST00000312210 ARAP1Q96P48 1450 aa24.04■■□□□ 1.44
MINDY1-201ENST00000312210 PRXQ9BXM0 1461 aa24.03■■□□□ 1.44
MINDY1-201ENST00000312210 BIVM-ERCC5R4GMW8 1640 aa23.99■■□□□ 1.43
MINDY1-201ENST00000312210 ERICH3Q5RHP9 1530 aa23.98■■□□□ 1.43
MINDY1-201ENST00000312210 CLSPNQ9HAW4 1339 aa23.96■■□□□ 1.43
MINDY1-201ENST00000312210 NCAPD3P42695 1498 aa23.88■■□□□ 1.41
MINDY1-201ENST00000312210 CUX1P39880 1505 aa23.88■■□□□ 1.41
MINDY1-201ENST00000312210 RRBP1Q9P2E9 1410 aaKnown RBP23.86■■□□□ 1.41
MINDY1-201ENST00000312210 KIF27Q86VH2 1401 aa23.84■■□□□ 1.41
MINDY1-201ENST00000312210 HMGXB3Q12766 1538 aa23.82■■□□□ 1.4
MINDY1-201ENST00000312210 ITGAEP38570 1179 aa23.8■■□□□ 1.4
MINDY1-201ENST00000312210 ARHGAP35Q9NRY4 1499 aa23.78■■□□□ 1.4
MINDY1-201ENST00000312210 CCNB3Q8WWL7 1395 aa23.78■■□□□ 1.4
MINDY1-201ENST00000312210 CUX2O14529 1486 aa23.73■■□□□ 1.39
MINDY1-201ENST00000312210 MYT1Q01538 1121 aa23.71■■□□□ 1.39
MINDY1-201ENST00000312210 CFTRP13569 1480 aa23.69■■□□□ 1.38
MINDY1-201ENST00000312210 SUPT16HQ9Y5B9 1047 aaKnown RBP23.67■■□□□ 1.38
MINDY1-201ENST00000312210 RAB3GAP2Q9H2M9 1393 aa23.64■■□□□ 1.37
MINDY1-201ENST00000312210 IGF1RP08069 1367 aa23.6■■□□□ 1.37
MINDY1-201ENST00000312210 KCNH8Q96L42 1107 aa23.58■■□□□ 1.36
MINDY1-201ENST00000312210 MAPKBP1O60336 1514 aa23.57■■□□□ 1.36
MINDY1-201ENST00000312210 TIAM1Q13009 1591 aa23.53■■□□□ 1.36
MINDY1-201ENST00000312210 PHLDB1Q86UU1 1377 aa23.5■■□□□ 1.35
MINDY1-201ENST00000312210 CARMIL1Q5VZK9 1371 aa23.49■■□□□ 1.35
MINDY1-201ENST00000312210 SETD5Q9C0A6 1442 aa23.48■■□□□ 1.35
MINDY1-201ENST00000312210 SIN3AQ96ST3 1273 aa23.48■■□□□ 1.35
MINDY1-201ENST00000312210 LRRC9Q6ZRR7 1453 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms