RNA–Protein interactions for RNA: ENST00000380633.1

TMSB4X-201, Transcript of thymosin beta 4 X-linked, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TMSB4X, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMSB4X-201ENST00000380633 NISCHQ9Y2I1 1504 aa48.54■■■■■ 5.36
TMSB4X-201ENST00000380633 CCDC180Q9P1Z9 1646 aa43.45■■■■■ 4.55
TMSB4X-201ENST00000380633 ABCC9O60706 1549 aa43.17■■■■■ 4.5
TMSB4X-201ENST00000380633 RB1CC1Q8TDY2 1594 aa41.17■■■■■ 4.18
TMSB4X-201ENST00000380633 NACADO15069 1562 aa40.95■■■■■ 4.15
TMSB4X-201ENST00000380633 DCAF8L2P0C7V8 631 aa40.79■■■■■ 4.12
TMSB4X-201ENST00000380633 UNC13AQ9UPW8 1703 aa40.45■■■■■ 4.07
TMSB4X-201ENST00000380633 MYO15BQ96JP2 1530 aa40.44■■■■■ 4.06
TMSB4X-201ENST00000380633 ZCCHC6Q5VYS8 1495 aaKnown RBP40.31■■■■■ 4.04
TMSB4X-201ENST00000380633 DNAJC5BQ9UF47 199 aa40.25■■■■■ 4.03
TMSB4X-201ENST00000380633 PABPN1Q86U42 306 aaKnown RBP eCLIP40.22■■■■■ 4.03
TMSB4X-201ENST00000380633 DCAF1Q9Y4B6 1507 aa40.06■■■■■ 4
TMSB4X-201ENST00000380633 BICRAQ9NZM4 1560 aa40.06■■■■■ 4
TMSB4X-201ENST00000380633 SCRIBQ14160 1630 aa39.67■■■■□ 3.94
TMSB4X-201ENST00000380633 SHROOM4Q9ULL8 1493 aa39.38■■■■□ 3.9
TMSB4X-201ENST00000380633 CC2D2AQ9P2K1 1620 aa39.04■■■■□ 3.84
TMSB4X-201ENST00000380633 EIF4G1Q04637 1599 aaKnown RBP39■■■■□ 3.83
TMSB4X-201ENST00000380633 CECR2Q9BXF3 1484 aa38.81■■■■□ 3.8
TMSB4X-201ENST00000380633 SMARCA4P51532 1647 aa37.85■■■■□ 3.65
TMSB4X-201ENST00000380633 NCAPD3P42695 1498 aa37.78■■■■□ 3.64
TMSB4X-201ENST00000380633 ATAD2BQ9ULI0 1458 aa37.76■■■■□ 3.63
TMSB4X-201ENST00000380633 SMARCA2P51531 1590 aa37.63■■■■□ 3.62
TMSB4X-201ENST00000380633 BAZ1AQ9NRL2 1556 aaPredicted RBP37.63■■■■□ 3.62
TMSB4X-201ENST00000380633 HMGXB3Q12766 1538 aa37.57■■■■□ 3.61
TMSB4X-201ENST00000380633 MROH2BQ7Z745 1585 aa37.46■■■■□ 3.59
TMSB4X-201ENST00000380633 PEG3Q9GZU2 1588 aa37.43■■■■□ 3.58
TMSB4X-201ENST00000380633 BAZ1BQ9UIG0 1483 aaKnown RBP37.39■■■■□ 3.58
TMSB4X-201ENST00000380633 NESP48681 1621 aa37.21■■■■□ 3.55
TMSB4X-201ENST00000380633 ERCC6Q03468 1493 aa37.19■■■■□ 3.54
TMSB4X-201ENST00000380633 WIZO95785 1651 aa37.07■■■■□ 3.52
TMSB4X-201ENST00000380633 CUX2O14529 1486 aa37.01■■■■□ 3.51
TMSB4X-201ENST00000380633 LAMC3Q9Y6N6 1575 aa36.91■■■■□ 3.5
TMSB4X-201ENST00000380633 KIF21AQ7Z4S6 1674 aa36.8■■■■□ 3.48
TMSB4X-201ENST00000380633 THOC2Q8NI27 1593 aaKnown RBP36.78■■■■□ 3.48
TMSB4X-201ENST00000380633 RSF1Q96T23 1441 aaPredicted RBP36.74■■■■□ 3.47
TMSB4X-201ENST00000380633 CADPSQ9ULU8 1353 aa36.65■■■■□ 3.46
TMSB4X-201ENST00000380633 DNAJC5Q9H3Z4 198 aa36.63■■■■□ 3.45
TMSB4X-201ENST00000380633 PDS5BQ9NTI5 1447 aa36.62■■■■□ 3.45
TMSB4X-201ENST00000380633 TOP2AP11388 1531 aaKnown RBP36.54■■■■□ 3.44
TMSB4X-201ENST00000380633 MRC2Q9UBG0 1479 aa36.37■■■■□ 3.41
TMSB4X-201ENST00000380633 CFTRP13569 1480 aa36.32■■■■□ 3.41
TMSB4X-201ENST00000380633 WDR62O43379 1518 aa36.29■■■■□ 3.4
TMSB4X-201ENST00000380633 FANCD2Q9BXW9 1451 aa36.27■■■■□ 3.4
TMSB4X-201ENST00000380633 CEP164Q9UPV0 1460 aa36.27■■■■□ 3.4
TMSB4X-201ENST00000380633 CCDC88BA6NC98 1476 aa36.13■■■■□ 3.37
TMSB4X-201ENST00000380633 PRDM2Q13029 1718 aa36.11■■■■□ 3.37
TMSB4X-201ENST00000380633 URB2Q14146 1524 aaKnown RBP36.01■■■■□ 3.36
TMSB4X-201ENST00000380633 TOPBP1Q92547 1522 aa35.65■■■■□ 3.3
TMSB4X-201ENST00000380633 DNMBPQ6XZF7 1577 aa35.54■■■■□ 3.28
TMSB4X-201ENST00000380633 ZNF608Q9ULD9 1512 aaPredicted RBP35.52■■■■□ 3.28
TMSB4X-201ENST00000380633 IFT140Q96RY7 1462 aa35.51■■■■□ 3.28
TMSB4X-201ENST00000380633 ABCC8Q09428 1581 aa35.47■■■■□ 3.27
TMSB4X-201ENST00000380633 EIF4G3O43432 1585 aaKnown RBP35.35■■■■□ 3.25
TMSB4X-201ENST00000380633 TARBP1Q13395 1621 aaKnown RBP35.35■■■■□ 3.25
TMSB4X-201ENST00000380633 SUPT5HO00267 1087 aaKnown RBP35.32■■■■□ 3.24
TMSB4X-201ENST00000380633 OSCARQ8IYS5 282 aa35.31■■■■□ 3.24
TMSB4X-201ENST00000380633 POLA1P09884 1462 aaPredicted RBP35.29■■■■□ 3.24
TMSB4X-201ENST00000380633 AQRO60306 1485 aaKnown RBP eCLIP35.21■■■■□ 3.235e-19■■■■□ 25.4
TMSB4X-201ENST00000380633 TRIM41Q8WV44 630 aa35.2■■■■□ 3.23
TMSB4X-201ENST00000380633 RAD54L2Q9Y4B4 1467 aa35.2■■■■□ 3.23
TMSB4X-201ENST00000380633 CUX1P39880 1505 aa35.18■■■■□ 3.22
TMSB4X-201ENST00000380633 FGD5Q6ZNL6 1462 aa35.13■■■■□ 3.21
TMSB4X-201ENST00000380633 CHD1O14646 1710 aa35.09■■■■□ 3.21
TMSB4X-201ENST00000380633 SOGA1O94964 1423 aa35.09■■■■□ 3.21
TMSB4X-201ENST00000380633 TDRD9Q8NDG6 1382 aaKnown RBP35.01■■■■□ 3.2
TMSB4X-201ENST00000380633 RIMBP3CA6NJZ7 1639 aa34.99■■■■□ 3.19
TMSB4X-201ENST00000380633 RIMBP3BA6NNM3 1639 aa34.99■■■■□ 3.19
TMSB4X-201ENST00000380633 RIMBP3Q9UFD9 1639 aa34.99■■■■□ 3.19
TMSB4X-201ENST00000380633 WDR97A6NE52 1622 aa34.95■■■■□ 3.18
TMSB4X-201ENST00000380633 ARHGEF11O15085 1522 aa34.86■■■■□ 3.17
TMSB4X-201ENST00000380633 SNAPC4Q5SXM2 1469 aa34.86■■■■□ 3.17
TMSB4X-201ENST00000380633 FBLN2P98095 1184 aa34.85■■■■□ 3.17
TMSB4X-201ENST00000380633 PBRM1Q86U86 1689 aa34.78■■■■□ 3.16
TMSB4X-201ENST00000380633 GRIN2BQ13224 1484 aa34.75■■■■□ 3.15
TMSB4X-201ENST00000380633 ABCA10Q8WWZ4 1543 aa34.72■■■■□ 3.15
TMSB4X-201ENST00000380633 MAGI1Q96QZ7 1491 aaPredicted RBP34.71■■■■□ 3.15
TMSB4X-201ENST00000380633 ABCA5Q8WWZ7 1642 aa34.7■■■■□ 3.15
TMSB4X-201ENST00000380633 BIVM-ERCC5R4GMW8 1640 aa34.7■■■■□ 3.15
TMSB4X-201ENST00000380633 GAPVD1Q14C86 1478 aa34.69■■■■□ 3.14
TMSB4X-201ENST00000380633 SYNJ1O43426 1573 aa34.69■■■■□ 3.14
TMSB4X-201ENST00000380633 TOP2BQ02880 1626 aa34.67■■■■□ 3.14
TMSB4X-201ENST00000380633 WRNQ14191 1432 aaPredicted RBP eCLIP34.63■■■■□ 3.13
TMSB4X-201ENST00000380633 CLASP1Q7Z460 1538 aa34.62■■■■□ 3.13
TMSB4X-201ENST00000380633 SYNJ2O15056 1496 aa34.61■■■■□ 3.13
TMSB4X-201ENST00000380633 CHMP7Q8WUX9 453 aaPredicted RBP34.6■■■■□ 3.13
TMSB4X-201ENST00000380633 ARAP1Q96P48 1450 aa34.56■■■■□ 3.12
TMSB4X-201ENST00000380633 CYB5RLQ6IPT4 315 aa34.52■■■■□ 3.12
TMSB4X-201ENST00000380633 ADAMTS12P58397 1594 aa34.41■■■■□ 3.1
TMSB4X-201ENST00000380633 GRIN2AQ12879 1464 aa34.33■■■■□ 3.09
TMSB4X-201ENST00000380633 ERICH3Q5RHP9 1530 aa34.27■■■■□ 3.08
TMSB4X-201ENST00000380633 CEP170Q5SW79 1584 aa34.27■■■■□ 3.08
TMSB4X-201ENST00000380633 FHAD1B1AJZ9 1412 aa34.23■■■■□ 3.07
TMSB4X-201ENST00000380633 NUP160Q12769 1436 aa34.21■■■■□ 3.07
TMSB4X-201ENST00000380633 ERCC6L2Q5T890 1561 aa34.17■■■■□ 3.06
TMSB4X-201ENST00000380633 SHROOM2Q13796 1616 aa34.08■■■■□ 3.05
TMSB4X-201ENST00000380633 TRHP20396 242 aaPredicted RBP34.02■■■■□ 3.04
TMSB4X-201ENST00000380633 RUSC2Q8N2Y8 1516 aa33.93■■■■□ 3.02
TMSB4X-201ENST00000380633 KIF27Q86VH2 1401 aa33.91■■■■□ 3.02
TMSB4X-201ENST00000380633 IGF1RP08069 1367 aa33.9■■■■□ 3.02
TMSB4X-201ENST00000380633 CUL7Q14999 1698 aa33.87■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms