RNA–Protein interactions for RNA: ENST00000639566.1

PRICKLE1-211, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-211ENST00000639566 NISCHQ9Y2I1 1504 aa31.41■■■□□ 2.62
PRICKLE1-211ENST00000639566 CCDC180Q9P1Z9 1646 aa27.92■■■□□ 2.06
PRICKLE1-211ENST00000639566 SHROOM4Q9ULL8 1493 aa27.26■■□□□ 1.95
PRICKLE1-211ENST00000639566 HRCP23327 699 aa27.23■■□□□ 1.95
PRICKLE1-211ENST00000639566 SUPT5HO00267 1087 aaKnown RBP27.06■■□□□ 1.92
PRICKLE1-211ENST00000639566 MYO15BQ96JP2 1530 aa26.9■■□□□ 1.9
PRICKLE1-211ENST00000639566 CHIC1Q5VXU3 224 aa26.71■■□□□ 1.87
PRICKLE1-211ENST00000639566 PCGF6Q9BYE7 350 aa26.66■■□□□ 1.86
PRICKLE1-211ENST00000639566 ZCCHC6Q5VYS8 1495 aaKnown RBP26.62■■□□□ 1.85
PRICKLE1-211ENST00000639566 PPARGC1BQ86YN6 1023 aaKnown RBP26.57■■□□□ 1.84
PRICKLE1-211ENST00000639566 ABCC9O60706 1549 aa26.44■■□□□ 1.82
PRICKLE1-211ENST00000639566 DCAF1Q9Y4B6 1507 aa26.35■■□□□ 1.81
PRICKLE1-211ENST00000639566 NACADO15069 1562 aa26■■□□□ 1.75
PRICKLE1-211ENST00000639566 LOC105371045A0A1W2PR82 267 aa25.97■■□□□ 1.75
PRICKLE1-211ENST00000639566 PELP1Q8IZL8 1130 aaKnown RBP25.96■■□□□ 1.75
PRICKLE1-211ENST00000639566 TRIM26Q12899 539 aaPredicted RBP25.95■■□□□ 1.75
PRICKLE1-211ENST00000639566 RB1CC1Q8TDY2 1594 aa25.85■■□□□ 1.73
PRICKLE1-211ENST00000639566 ZEB1P37275 1124 aaPredicted RBP25.7■■□□□ 1.7
PRICKLE1-211ENST00000639566 DCAF8L2P0C7V8 631 aa25.67■■□□□ 1.7
PRICKLE1-211ENST00000639566 SCAF1Q9H7N4 1312 aaKnown RBP25.61■■□□□ 1.69
PRICKLE1-211ENST00000639566 UNC13AQ9UPW8 1703 aa25.52■■□□□ 1.68
PRICKLE1-211ENST00000639566 SCRIBQ14160 1630 aa25.22■■□□□ 1.63
PRICKLE1-211ENST00000639566 BICRAQ9NZM4 1560 aa25.21■■□□□ 1.63
PRICKLE1-211ENST00000639566 TRIM41Q8WV44 630 aa25.11■■□□□ 1.61
PRICKLE1-211ENST00000639566 RSF1Q96T23 1441 aaPredicted RBP25.06■■□□□ 1.6
PRICKLE1-211ENST00000639566 ACIN1Q9UKV3 1341 aaKnown RBP25.06■■□□□ 1.6
PRICKLE1-211ENST00000639566 FAM9AQ8IZU1 332 aaPredicted RBP24.99■■□□□ 1.59
PRICKLE1-211ENST00000639566 NEUROD1Q13562 356 aa24.97■■□□□ 1.59
PRICKLE1-211ENST00000639566 MYT1Q01538 1121 aa24.89■■□□□ 1.58
PRICKLE1-211ENST00000639566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.79■■□□□ 1.56
PRICKLE1-211ENST00000639566 GTF3C3Q9Y5Q9 886 aa24.79■■□□□ 1.56
PRICKLE1-211ENST00000639566 EHMT2Q96KQ7 1210 aa24.78■■□□□ 1.56
PRICKLE1-211ENST00000639566 CENPBP07199 599 aaPredicted RBP24.73■■□□□ 1.55
PRICKLE1-211ENST00000639566 CCER1Q8TC90 406 aaPredicted RBP24.73■■□□□ 1.55
PRICKLE1-211ENST00000639566 DIEXFQ68CQ4 756 aaKnown RBP24.71■■□□□ 1.55
PRICKLE1-211ENST00000639566 PABPN1Q86U42 306 aaKnown RBP eCLIP24.63■■□□□ 1.53
PRICKLE1-211ENST00000639566 WRNQ14191 1432 aaPredicted RBP eCLIP24.39■■□□□ 1.5
PRICKLE1-211ENST00000639566 CECR2Q9BXF3 1484 aa24.39■■□□□ 1.49
PRICKLE1-211ENST00000639566 MROH2BQ7Z745 1585 aa24.38■■□□□ 1.49
PRICKLE1-211ENST00000639566 EIF4G1Q04637 1599 aaKnown RBP24.38■■□□□ 1.49
PRICKLE1-211ENST00000639566 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
PRICKLE1-211ENST00000639566 ZNF316A6NFI3 1004 aaPredicted RBP24.32■■□□□ 1.48
PRICKLE1-211ENST00000639566 WIZO95785 1651 aa24.31■■□□□ 1.48
PRICKLE1-211ENST00000639566 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
PRICKLE1-211ENST00000639566 PEG3Q9GZU2 1588 aa24.23■■□□□ 1.47
PRICKLE1-211ENST00000639566 CEP162Q5TB80 1403 aa24.21■■□□□ 1.47
PRICKLE1-211ENST00000639566 TTBK1Q5TCY1 1321 aaPredicted RBP24.19■■□□□ 1.46
PRICKLE1-211ENST00000639566 YTHDC1Q96MU7 727 aaKnown RBP24.18■■□□□ 1.46
PRICKLE1-211ENST00000639566 CC2D2AQ9P2K1 1620 aa24.15■■□□□ 1.46
PRICKLE1-211ENST00000639566 MIER1Q8N108 512 aa24.1■■□□□ 1.45
PRICKLE1-211ENST00000639566 TNIKQ9UKE5 1360 aa24.09■■□□□ 1.45
PRICKLE1-211ENST00000639566 CCDC88BA6NC98 1476 aa24.08■■□□□ 1.44
PRICKLE1-211ENST00000639566 ABCC8Q09428 1581 aa24.05■■□□□ 1.44
PRICKLE1-211ENST00000639566 SMARCA2P51531 1590 aa24■■□□□ 1.43
PRICKLE1-211ENST00000639566 ATAD2BQ9ULI0 1458 aa23.98■■□□□ 1.43
PRICKLE1-211ENST00000639566 SOGA1O94964 1423 aa23.96■■□□□ 1.43
PRICKLE1-211ENST00000639566 HMGXB3Q12766 1538 aa23.96■■□□□ 1.43
PRICKLE1-211ENST00000639566 NCAPD3P42695 1498 aa23.95■■□□□ 1.42
PRICKLE1-211ENST00000639566 EEA1Q15075 1411 aa23.9■■□□□ 1.42
PRICKLE1-211ENST00000639566 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.41
PRICKLE1-211ENST00000639566 DNAJC5BQ9UF47 199 aa23.89■■□□□ 1.41
PRICKLE1-211ENST00000639566 CSRNP3Q8WYN3 585 aa23.84■■□□□ 1.41
PRICKLE1-211ENST00000639566 RUSC2Q8N2Y8 1516 aa23.83■■□□□ 1.4
PRICKLE1-211ENST00000639566 GOLGA3Q08378 1498 aa23.81■■□□□ 1.4
PRICKLE1-211ENST00000639566 UBTFP17480 764 aaKnown RBP23.81■■□□□ 1.4
PRICKLE1-211ENST00000639566 HNRNPUL2Q1KMD3 747 aaKnown RBP23.78■■□□□ 1.4
PRICKLE1-211ENST00000639566 CLSPNQ9HAW4 1339 aa23.76■■□□□ 1.39
PRICKLE1-211ENST00000639566 BAZ1BQ9UIG0 1483 aaKnown RBP23.72■■□□□ 1.39
PRICKLE1-211ENST00000639566 SUPT16HQ9Y5B9 1047 aaKnown RBP23.7■■□□□ 1.38
PRICKLE1-211ENST00000639566 KIF21BO75037 1637 aa23.6■■□□□ 1.37
PRICKLE1-211ENST00000639566 CEP164Q9UPV0 1460 aa23.59■■□□□ 1.37
PRICKLE1-211ENST00000639566 VPS8Q8N3P4 1428 aa23.58■■□□□ 1.36
PRICKLE1-211ENST00000639566 CLIP1P30622 1438 aa23.57■■□□□ 1.36
PRICKLE1-211ENST00000639566 TSHZ2Q9NRE2 1034 aa23.54■■□□□ 1.36
PRICKLE1-211ENST00000639566 ANP32EQ9BTT0 268 aa23.49■■□□□ 1.35
PRICKLE1-211ENST00000639566 DHX57Q6P158 1386 aaKnown RBP23.46■■□□□ 1.35
PRICKLE1-211ENST00000639566 APLP2Q06481 763 aa23.41■■□□□ 1.34
PRICKLE1-211ENST00000639566 SYNJ1O43426 1573 aa23.41■■□□□ 1.34
PRICKLE1-211ENST00000639566 RAPGEF2Q9Y4G8 1499 aa23.34■■□□□ 1.33
PRICKLE1-211ENST00000639566 PRDM2Q13029 1718 aa23.34■■□□□ 1.33
PRICKLE1-211ENST00000639566 LAMC3Q9Y6N6 1575 aa23.28■■□□□ 1.32
PRICKLE1-211ENST00000639566 BCL11AQ9H165 835 aa23.27■■□□□ 1.32
PRICKLE1-211ENST00000639566 CFTRP13569 1480 aa23.23■■□□□ 1.31
PRICKLE1-211ENST00000639566 CUX2O14529 1486 aa23.18■■□□□ 1.3
PRICKLE1-211ENST00000639566 KCNH8Q96L42 1107 aa23.17■■□□□ 1.3
PRICKLE1-211ENST00000639566 RANGAP1P46060 587 aaPredicted RBP23.16■■□□□ 1.3
PRICKLE1-211ENST00000639566 RRBP1Q9P2E9 1410 aaKnown RBP23.16■■□□□ 1.3
PRICKLE1-211ENST00000639566 ARAP1Q96P48 1450 aa23.15■■□□□ 1.3
PRICKLE1-211ENST00000639566 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.3
PRICKLE1-211ENST00000639566 KANK4Q5T7N3 995 aaPredicted RBP23.11■■□□□ 1.29
PRICKLE1-211ENST00000639566 NESP48681 1621 aa23.1■■□□□ 1.29
PRICKLE1-211ENST00000639566 BCANQ96GW7 911 aa23.1■■□□□ 1.29
PRICKLE1-211ENST00000639566 ERICH3Q5RHP9 1530 aa23.06■■□□□ 1.28
PRICKLE1-211ENST00000639566 FKBP8Q14318 412 aa23.06■■□□□ 1.28
PRICKLE1-211ENST00000639566 KIF21AQ7Z4S6 1674 aa23.03■■□□□ 1.28
PRICKLE1-211ENST00000639566 TOP2BQ02880 1626 aa23.02■■□□□ 1.28
PRICKLE1-211ENST00000639566 PRXQ9BXM0 1461 aa23■■□□□ 1.27
PRICKLE1-211ENST00000639566 MAPKBP1O60336 1514 aa23■■□□□ 1.27
PRICKLE1-211ENST00000639566 CCNB3Q8WWL7 1395 aa22.99■■□□□ 1.27
PRICKLE1-211ENST00000639566 RBM19Q9Y4C8 960 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms