RNA–Protein interactions for RNA: ENST00000259997.9

CPEB2-201, Transcript of cytoplasmic polyadenylation element binding protein 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CPEB2, Length 5,612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB2-201ENST00000259997 DCAF8L2P0C7V8 631 aa28.85■■■□□ 2.21
CPEB2-201ENST00000259997 NISCHQ9Y2I1 1504 aa27.59■■■□□ 2.01
CPEB2-201ENST00000259997 FAM9AQ8IZU1 332 aaPredicted RBP26.33■■□□□ 1.81
CPEB2-201ENST00000259997 SUPT5HO00267 1087 aaKnown RBP26.3■■□□□ 1.8
CPEB2-201ENST00000259997 SHROOM4Q9ULL8 1493 aa26.01■■□□□ 1.75
CPEB2-201ENST00000259997 APLP2Q06481 763 aa25.64■■□□□ 1.7
CPEB2-201ENST00000259997 PELP1Q8IZL8 1130 aaKnown RBP25.6■■□□□ 1.69
CPEB2-201ENST00000259997 MYT1Q01538 1121 aa25.49■■□□□ 1.67
CPEB2-201ENST00000259997 EHMT2Q96KQ7 1210 aa25.23■■□□□ 1.63
CPEB2-201ENST00000259997 ATP1B4Q9UN42 357 aaPredicted RBP24.82■■□□□ 1.56
CPEB2-201ENST00000259997 TRIM41Q8WV44 630 aa24.68■■□□□ 1.54
CPEB2-201ENST00000259997 RANGAP1P46060 587 aaPredicted RBP24.65■■□□□ 1.54
CPEB2-201ENST00000259997 PCGF6Q9BYE7 350 aa24.59■■□□□ 1.53
CPEB2-201ENST00000259997 ABCC9O60706 1549 aa24.57■■□□□ 1.52
CPEB2-201ENST00000259997 ZEB1P37275 1124 aaPredicted RBP24.53■■□□□ 1.52
CPEB2-201ENST00000259997 UBTFP17480 764 aaKnown RBP24.53■■□□□ 1.52
CPEB2-201ENST00000259997 MYT1LQ9UL68 1186 aa24.46■■□□□ 1.51
CPEB2-201ENST00000259997 CENPBP07199 599 aaPredicted RBP24.4■■□□□ 1.5
CPEB2-201ENST00000259997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.33■■□□□ 1.49
CPEB2-201ENST00000259997 HNRNPUL2Q1KMD3 747 aaKnown RBP24.33■■□□□ 1.49
CPEB2-201ENST00000259997 TTBK1Q5TCY1 1321 aaPredicted RBP24.27■■□□□ 1.48
CPEB2-201ENST00000259997 PABPN1Q86U42 306 aaKnown RBP eCLIP24.23■■□□□ 1.47
CPEB2-201ENST00000259997 ERICH6Q7L0X2 663 aa24.1■■□□□ 1.45
CPEB2-201ENST00000259997 CCER1Q8TC90 406 aaPredicted RBP23.95■■□□□ 1.42
CPEB2-201ENST00000259997 HRCP23327 699 aa23.92■■□□□ 1.42
CPEB2-201ENST00000259997 TRIM26Q12899 539 aaPredicted RBP23.75■■□□□ 1.39
CPEB2-201ENST00000259997 FBLN2P98095 1184 aa23.74■■□□□ 1.39
CPEB2-201ENST00000259997 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
CPEB2-201ENST00000259997 NEFLP07196 543 aa23.5■■□□□ 1.35
CPEB2-201ENST00000259997 YTHDC1Q96MU7 727 aaKnown RBP23.43■■□□□ 1.34
CPEB2-201ENST00000259997 ITGAEP38570 1179 aa23.41■■□□□ 1.34
CPEB2-201ENST00000259997 NPM1P06748 294 aaKnown RBP eCLIP23.41■■□□□ 1.34
CPEB2-201ENST00000259997 ESF1Q9H501 851 aaKnown RBP23.3■■□□□ 1.32
CPEB2-201ENST00000259997 SLC4A1APQ9BWU0 796 aaKnown RBP23.25■■□□□ 1.31
CPEB2-201ENST00000259997 POLR3GLQ9BT43 218 aa23.22■■□□□ 1.31
CPEB2-201ENST00000259997 SCRIBQ14160 1630 aa23.18■■□□□ 1.3
CPEB2-201ENST00000259997 CDK11AQ9UQ88 783 aaPredicted RBP23.17■■□□□ 1.3
CPEB2-201ENST00000259997 RB1CC1Q8TDY2 1594 aa23.11■■□□□ 1.29
CPEB2-201ENST00000259997 PPARGC1BQ86YN6 1023 aaKnown RBP23.11■■□□□ 1.29
CPEB2-201ENST00000259997 BCANQ96GW7 911 aa23.11■■□□□ 1.29
CPEB2-201ENST00000259997 FAM50AQ14320 339 aaKnown RBP23.1■■□□□ 1.29
CPEB2-201ENST00000259997 LOC105371045A0A1W2PR82 267 aa23.09■■□□□ 1.29
CPEB2-201ENST00000259997 TRIM52Q96A61 297 aa23.07■■□□□ 1.28
CPEB2-201ENST00000259997 CCDC180Q9P1Z9 1646 aa23.04■■□□□ 1.28
CPEB2-201ENST00000259997 DIEXFQ68CQ4 756 aaKnown RBP22.92■■□□□ 1.26
CPEB2-201ENST00000259997 CHMP7Q8WUX9 453 aaPredicted RBP22.86■■□□□ 1.25
CPEB2-201ENST00000259997 STAG3Q9UJ98 1225 aa22.83■■□□□ 1.24
CPEB2-201ENST00000259997 GTF3C3Q9Y5Q9 886 aa22.8■■□□□ 1.24
CPEB2-201ENST00000259997 ZNF777Q9ULD5 760 aaPredicted RBP22.77■■□□□ 1.24
CPEB2-201ENST00000259997 ARID3CA6NKF2 412 aa22.74■■□□□ 1.23
CPEB2-201ENST00000259997 P3H3Q8IVL6 736 aa22.73■■□□□ 1.23
CPEB2-201ENST00000259997 NACADO15069 1562 aa22.73■■□□□ 1.23
CPEB2-201ENST00000259997 ERCC6Q03468 1493 aa22.71■■□□□ 1.23
CPEB2-201ENST00000259997 CSRNP3Q8WYN3 585 aa22.69■■□□□ 1.22
CPEB2-201ENST00000259997 ZCCHC6Q5VYS8 1495 aaKnown RBP22.69■■□□□ 1.22
CPEB2-201ENST00000259997 RTL5Q5HYW3 569 aaPredicted RBP22.68■■□□□ 1.22
CPEB2-201ENST00000259997 PLPPR3Q6T4P5 718 aa22.66■■□□□ 1.22
CPEB2-201ENST00000259997 NEFMP07197 916 aa22.66■■□□□ 1.22
CPEB2-201ENST00000259997 DAXXQ9UER7 740 aaPredicted RBP22.63■■□□□ 1.21
CPEB2-201ENST00000259997 CNGB1Q14028 1251 aaPredicted RBP22.61■■□□□ 1.21
CPEB2-201ENST00000259997 ZNF326Q5BKZ1 582 aaKnown RBP22.59■■□□□ 1.21
CPEB2-201ENST00000259997 ACIN1Q9UKV3 1341 aaKnown RBP22.59■■□□□ 1.21
CPEB2-201ENST00000259997 CHGAP10645 457 aaKnown RBP22.51■■□□□ 1.19
CPEB2-201ENST00000259997 SLC24A1O60721 1099 aa22.47■■□□□ 1.19
CPEB2-201ENST00000259997 NEUROD1Q13562 356 aa22.43■■□□□ 1.18
CPEB2-201ENST00000259997 BAZ1BQ9UIG0 1483 aaKnown RBP22.42■■□□□ 1.18
CPEB2-201ENST00000259997 ZNF316A6NFI3 1004 aaPredicted RBP22.41■■□□□ 1.18
CPEB2-201ENST00000259997 TSPY4P0CV99 314 aa22.41■■□□□ 1.18
CPEB2-201ENST00000259997 TSPY10P0CW01 314 aa22.41■■□□□ 1.18
CPEB2-201ENST00000259997 ZBTB47Q9UFB7 747 aaPredicted RBP22.41■■□□□ 1.18
CPEB2-201ENST00000259997 TRHP20396 242 aaPredicted RBP22.36■■□□□ 1.17
CPEB2-201ENST00000259997 DCAF1Q9Y4B6 1507 aa22.35■■□□□ 1.17
CPEB2-201ENST00000259997 ARID4BQ4LE39 1312 aaPredicted RBP22.35■■□□□ 1.17
CPEB2-201ENST00000259997 PLEKHD1A6NEE1 506 aa22.3■■□□□ 1.16
CPEB2-201ENST00000259997 CLSPNQ9HAW4 1339 aa22.3■■□□□ 1.16
CPEB2-201ENST00000259997 KCNH8Q96L42 1107 aa22.23■■□□□ 1.15
CPEB2-201ENST00000259997 PPP1R15AO75807 674 aaPredicted RBP22.22■■□□□ 1.15
CPEB2-201ENST00000259997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.2■■□□□ 1.14
CPEB2-201ENST00000259997 SCAF1Q9H7N4 1312 aaKnown RBP22.19■■□□□ 1.14
CPEB2-201ENST00000259997 C14orf37Q86TY3 774 aa22.18■■□□□ 1.14
CPEB2-201ENST00000259997 MTUS2Q5JR59 1369 aa22.18■■□□□ 1.14
CPEB2-201ENST00000259997 ANP32CO43423 234 aa22.17■■□□□ 1.14
CPEB2-201ENST00000259997 RSF1Q96T23 1441 aaPredicted RBP22.09■■□□□ 1.13
CPEB2-201ENST00000259997 PDS5BQ9NTI5 1447 aa22.08■■□□□ 1.12
CPEB2-201ENST00000259997 CANXP27824 592 aaKnown RBP22.06■■□□□ 1.12
CPEB2-201ENST00000259997 GLIPR1L2Q4G1C9 344 aa22.05■■□□□ 1.12
CPEB2-201ENST00000259997 HAP1P54257 671 aaPredicted RBP22.04■■□□□ 1.12
CPEB2-201ENST00000259997 NPM2Q86SE8 214 aaKnown RBP22.02■■□□□ 1.12
CPEB2-201ENST00000259997 KIF27Q86VH2 1401 aa22.01■■□□□ 1.11
CPEB2-201ENST00000259997 BAZ1AQ9NRL2 1556 aaPredicted RBP21.99■■□□□ 1.11
CPEB2-201ENST00000259997 EIF5BO60841 1220 aaKnown RBP21.97■■□□□ 1.11
CPEB2-201ENST00000259997 EEA1Q15075 1411 aa21.96■■□□□ 1.11
CPEB2-201ENST00000259997 TONSLQ96HA7 1378 aa21.95■■□□□ 1.1
CPEB2-201ENST00000259997 CHIC2Q9UKJ5 165 aa21.93■■□□□ 1.1
CPEB2-201ENST00000259997 A0A0G2JS52 829 aa21.92■■□□□ 1.1
CPEB2-201ENST00000259997 WRNQ14191 1432 aaPredicted RBP eCLIP21.91■■□□□ 1.1
CPEB2-201ENST00000259997 HDGFP51858 240 aaKnown RBP21.9■■□□□ 1.1
CPEB2-201ENST00000259997 CFDP1Q9UEE9 299 aaPredicted RBP21.87■■□□□ 1.09
CPEB2-201ENST00000259997 SMARCA2P51531 1590 aa21.84■■□□□ 1.09
CPEB2-201ENST00000259997 ANP32EQ9BTT0 268 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms