Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.44■□□□□ 0.22
LPCAT4Q643R3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 KRT8P9-201ENST00000558927 1449 ntBASIC16.44■□□□□ 0.22
LPCAT4Q643R3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LPCAT4Q643R3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.43■□□□□ 0.22
LPCAT4Q643R3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 MIR4674-201ENST00000582457 87 ntBASIC16.43■□□□□ 0.22
LPCAT4Q643R3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
LPCAT4Q643R3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 AC093525.9-201ENST00000624961 1746 ntBASIC16.42■□□□□ 0.22
LPCAT4Q643R3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 AC011506.1-201ENST00000474329 610 ntBASIC16.42■□□□□ 0.22
LPCAT4Q643R3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms