RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 DCAF8L2P0C7V8 631 aa29.82■■■□□ 2.36
PDS5A-201ENST00000303538 EHMT2Q96KQ7 1210 aa27.56■■■□□ 2
PDS5A-201ENST00000303538 SUPT5HO00267 1087 aaKnown RBP27.46■■□□□ 1.99
PDS5A-201ENST00000303538 SHROOM4Q9ULL8 1493 aa26.86■■□□□ 1.89
PDS5A-201ENST00000303538 APLP2Q06481 763 aa26.53■■□□□ 1.84
PDS5A-201ENST00000303538 PELP1Q8IZL8 1130 aaKnown RBP26.42■■□□□ 1.82
PDS5A-201ENST00000303538 TTBK1Q5TCY1 1321 aaPredicted RBP26.41■■□□□ 1.82
PDS5A-201ENST00000303538 FAM9AQ8IZU1 332 aaPredicted RBP26.36■■□□□ 1.81
PDS5A-201ENST00000303538 RANGAP1P46060 587 aaPredicted RBP26.35■■□□□ 1.81
PDS5A-201ENST00000303538 ATP1B4Q9UN42 357 aaPredicted RBP26.14■■□□□ 1.77
PDS5A-201ENST00000303538 PCGF6Q9BYE7 350 aa25.72■■□□□ 1.71
PDS5A-201ENST00000303538 ERICH6Q7L0X2 663 aa25.67■■□□□ 1.7
PDS5A-201ENST00000303538 NISCHQ9Y2I1 1504 aa25.6■■□□□ 1.69
PDS5A-201ENST00000303538 MYT1LQ9UL68 1186 aa25.6■■□□□ 1.69
PDS5A-201ENST00000303538 CHIC1Q5VXU3 224 aa25.56■■□□□ 1.68
PDS5A-201ENST00000303538 CCER1Q8TC90 406 aaPredicted RBP25.33■■□□□ 1.65
PDS5A-201ENST00000303538 UBTFP17480 764 aaKnown RBP25.3■■□□□ 1.64
PDS5A-201ENST00000303538 TRIM41Q8WV44 630 aa25.2■■□□□ 1.63
PDS5A-201ENST00000303538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.12■■□□□ 1.61
PDS5A-201ENST00000303538 HNRNPUL2Q1KMD3 747 aaKnown RBP25.12■■□□□ 1.61
PDS5A-201ENST00000303538 CENPBP07199 599 aaPredicted RBP25.11■■□□□ 1.61
PDS5A-201ENST00000303538 YTHDC1Q96MU7 727 aaKnown RBP25.06■■□□□ 1.6
PDS5A-201ENST00000303538 POLR3GLQ9BT43 218 aa25.02■■□□□ 1.6
PDS5A-201ENST00000303538 NEFLP07196 543 aa25.01■■□□□ 1.59
PDS5A-201ENST00000303538 PPARGC1BQ86YN6 1023 aaKnown RBP24.98■■□□□ 1.59
PDS5A-201ENST00000303538 CNGB1Q14028 1251 aaPredicted RBP24.9■■□□□ 1.58
PDS5A-201ENST00000303538 SLC4A1APQ9BWU0 796 aaKnown RBP24.83■■□□□ 1.57
PDS5A-201ENST00000303538 ITGAEP38570 1179 aa24.83■■□□□ 1.57
PDS5A-201ENST00000303538 ZEB1P37275 1124 aaPredicted RBP24.71■■□□□ 1.55
PDS5A-201ENST00000303538 MYT1Q01538 1121 aa24.67■■□□□ 1.54
PDS5A-201ENST00000303538 DAXXQ9UER7 740 aaPredicted RBP24.64■■□□□ 1.54
PDS5A-201ENST00000303538 PLPPR3Q6T4P5 718 aa24.4■■□□□ 1.5
PDS5A-201ENST00000303538 FBLN2P98095 1184 aa24.24■■□□□ 1.47
PDS5A-201ENST00000303538 SLC24A1O60721 1099 aa24.22■■□□□ 1.47
PDS5A-201ENST00000303538 BCANQ96GW7 911 aa24.2■■□□□ 1.46
PDS5A-201ENST00000303538 CLSPNQ9HAW4 1339 aa24.2■■□□□ 1.46
PDS5A-201ENST00000303538 PABPN1Q86U42 306 aaKnown RBP eCLIP24.1■■□□□ 1.45
PDS5A-201ENST00000303538 BCL11AQ9H165 835 aa24.04■■□□□ 1.44
PDS5A-201ENST00000303538 ZNF316A6NFI3 1004 aaPredicted RBP24■■□□□ 1.43
PDS5A-201ENST00000303538 FAM50AQ14320 339 aaKnown RBP23.96■■□□□ 1.43
PDS5A-201ENST00000303538 TRIM52Q96A61 297 aa23.95■■□□□ 1.43
PDS5A-201ENST00000303538 TRIM26Q12899 539 aaPredicted RBP23.93■■□□□ 1.42
PDS5A-201ENST00000303538 LOC105371045A0A1W2PR82 267 aa23.88■■□□□ 1.41
PDS5A-201ENST00000303538 ARID3CA6NKF2 412 aa23.86■■□□□ 1.41
PDS5A-201ENST00000303538 ZNF326Q5BKZ1 582 aaKnown RBP23.85■■□□□ 1.41
PDS5A-201ENST00000303538 NEUROD1Q13562 356 aa23.78■■□□□ 1.4
PDS5A-201ENST00000303538 ZBTB47Q9UFB7 747 aaPredicted RBP23.76■■□□□ 1.39
PDS5A-201ENST00000303538 ABCC9O60706 1549 aa23.74■■□□□ 1.39
PDS5A-201ENST00000303538 HRCP23327 699 aa23.73■■□□□ 1.39
PDS5A-201ENST00000303538 RTL5Q5HYW3 569 aaPredicted RBP23.7■■□□□ 1.38
PDS5A-201ENST00000303538 ESF1Q9H501 851 aaKnown RBP23.54■■□□□ 1.36
PDS5A-201ENST00000303538 SCAF1Q9H7N4 1312 aaKnown RBP23.53■■□□□ 1.36
PDS5A-201ENST00000303538 CANXP27824 592 aaKnown RBP23.52■■□□□ 1.36
PDS5A-201ENST00000303538 PLEKHG5O94827 1062 aa23.52■■□□□ 1.36
PDS5A-201ENST00000303538 A0A0G2JS52 829 aa23.52■■□□□ 1.36
PDS5A-201ENST00000303538 NEFMP07197 916 aa23.47■■□□□ 1.35
PDS5A-201ENST00000303538 SENP3Q9H4L4 574 aaPredicted RBP23.44■■□□□ 1.34
PDS5A-201ENST00000303538 P3H3Q8IVL6 736 aa23.41■■□□□ 1.34
PDS5A-201ENST00000303538 ZNF777Q9ULD5 760 aaPredicted RBP23.39■■□□□ 1.34
PDS5A-201ENST00000303538 DIEXFQ68CQ4 756 aaKnown RBP23.39■■□□□ 1.33
PDS5A-201ENST00000303538 STAG3Q9UJ98 1225 aa23.39■■□□□ 1.33
PDS5A-201ENST00000303538 CHGAP10645 457 aaKnown RBP23.35■■□□□ 1.33
PDS5A-201ENST00000303538 ANP32CO43423 234 aa23.28■■□□□ 1.32
PDS5A-201ENST00000303538 ZBTB7CA1YPR0 619 aa23.22■■□□□ 1.31
PDS5A-201ENST00000303538 CDK11AQ9UQ88 783 aaPredicted RBP23.12■■□□□ 1.29
PDS5A-201ENST00000303538 NPM1P06748 294 aaKnown RBP eCLIP23.12■■□□□ 1.29
PDS5A-201ENST00000303538 NPM2Q86SE8 214 aaKnown RBP23.03■■□□□ 1.28
PDS5A-201ENST00000303538 C14orf37Q86TY3 774 aa22.94■■□□□ 1.26
PDS5A-201ENST00000303538 HSP90AA1P07900 732 aaKnown RBP22.93■■□□□ 1.26
PDS5A-201ENST00000303538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.92■■□□□ 1.261e-8■□□□□ 11.2
PDS5A-201ENST00000303538 SALL2Q9Y467 1007 aaPredicted RBP22.92■■□□□ 1.26
PDS5A-201ENST00000303538 GTF3C3Q9Y5Q9 886 aa22.84■■□□□ 1.25
PDS5A-201ENST00000303538 ARID4BQ4LE39 1312 aaPredicted RBP22.84■■□□□ 1.25
PDS5A-201ENST00000303538 HAP1P54257 671 aaPredicted RBP22.81■■□□□ 1.24
PDS5A-201ENST00000303538 ANP32AP39687 249 aaKnown RBP22.78■■□□□ 1.24
PDS5A-201ENST00000303538 TRHP20396 242 aaPredicted RBP22.78■■□□□ 1.24
PDS5A-201ENST00000303538 ARXQ96QS3 562 aa22.73■■□□□ 1.23
PDS5A-201ENST00000303538 ANP32BQ92688 251 aaKnown RBP22.72■■□□□ 1.23
PDS5A-201ENST00000303538 TULP1O00294 542 aaPredicted RBP22.67■■□□□ 1.22
PDS5A-201ENST00000303538 FAM9BQ8IZU0 186 aa22.67■■□□□ 1.22
PDS5A-201ENST00000303538 CHIC2Q9UKJ5 165 aa22.65■■□□□ 1.22
PDS5A-201ENST00000303538 KDM2AQ9Y2K7 1162 aa22.64■■□□□ 1.21
PDS5A-201ENST00000303538 UPF2Q9HAU5 1272 aaKnown RBP22.63■■□□□ 1.21
PDS5A-201ENST00000303538 KCNH8Q96L42 1107 aa22.62■■□□□ 1.21
PDS5A-201ENST00000303538 CDK11BP21127 795 aaKnown RBP22.58■■□□□ 1.21
PDS5A-201ENST00000303538 EIF5BO60841 1220 aaKnown RBP22.56■■□□□ 1.2
PDS5A-201ENST00000303538 PPP1R15AO75807 674 aaPredicted RBP22.56■■□□□ 1.2
PDS5A-201ENST00000303538 TONSLQ96HA7 1378 aa22.55■■□□□ 1.2
PDS5A-201ENST00000303538 HNRNPUQ00839 825 aaKnown RBP eCLIP22.53■■□□□ 1.2
PDS5A-201ENST00000303538 LMOD2Q6P5Q4 547 aa22.51■■□□□ 1.19
PDS5A-201ENST00000303538 CHMP7Q8WUX9 453 aaPredicted RBP22.51■■□□□ 1.19
PDS5A-201ENST00000303538 WDR43Q15061 677 aaKnown RBP eCLIP22.5■■□□□ 1.19
PDS5A-201ENST00000303538 CSRNP3Q8WYN3 585 aa22.5■■□□□ 1.19
PDS5A-201ENST00000303538 FKBP8Q14318 412 aa22.48■■□□□ 1.19
PDS5A-201ENST00000303538 TMC1Q8TDI8 760 aa22.48■■□□□ 1.19
PDS5A-201ENST00000303538 NPHP1O15259 732 aa22.47■■□□□ 1.19
PDS5A-201ENST00000303538 DDX10Q13206 875 aaKnown RBP22.46■■□□□ 1.19
PDS5A-201ENST00000303538 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.43■■□□□ 1.18
PDS5A-201ENST00000303538 TSPY4P0CV99 314 aa22.41■■□□□ 1.18
PDS5A-201ENST00000303538 TSPY10P0CW01 314 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms