RNA–Protein interactions for RNA: ENST00000307422.9

MRPL4-202, Transcript of mitochondrial ribosomal protein L4, humanhuman

APPRIS P2 TSL 5 BASIC

Gene MRPL4, Length 1,320 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL4-202ENST00000307422 NISCHQ9Y2I1 1504 aa48.67■■■■■ 5.38
MRPL4-202ENST00000307422 CCDC180Q9P1Z9 1646 aa43.48■■■■■ 4.55
MRPL4-202ENST00000307422 ABCC9O60706 1549 aa42.68■■■■■ 4.42
MRPL4-202ENST00000307422 RB1CC1Q8TDY2 1594 aa41.02■■■■■ 4.16
MRPL4-202ENST00000307422 NACADO15069 1562 aa40.9■■■■■ 4.14
MRPL4-202ENST00000307422 DCAF8L2P0C7V8 631 aa40.64■■■■■ 4.1
MRPL4-202ENST00000307422 MYO15BQ96JP2 1530 aa40.59■■■■■ 4.09
MRPL4-202ENST00000307422 ZCCHC6Q5VYS8 1495 aaKnown RBP40.49■■■■■ 4.07
MRPL4-202ENST00000307422 DCAF1Q9Y4B6 1507 aa40.3■■■■■ 4.04
MRPL4-202ENST00000307422 UNC13AQ9UPW8 1703 aa40.11■■■■■ 4.01
MRPL4-202ENST00000307422 PABPN1Q86U42 306 aaKnown RBP eCLIP39.77■■■■□ 3.96
MRPL4-202ENST00000307422 BICRAQ9NZM4 1560 aa39.76■■■■□ 3.96
MRPL4-202ENST00000307422 SCRIBQ14160 1630 aa39.56■■■■□ 3.92
MRPL4-202ENST00000307422 SHROOM4Q9ULL8 1493 aa39.39■■■■□ 3.9
MRPL4-202ENST00000307422 DNAJC5BQ9UF47 199 aa39.36■■■■□ 3.89
MRPL4-202ENST00000307422 EIF4G1Q04637 1599 aaKnown RBP38.74■■■■□ 3.79
MRPL4-202ENST00000307422 CC2D2AQ9P2K1 1620 aa38.64■■■■□ 3.78
MRPL4-202ENST00000307422 CECR2Q9BXF3 1484 aa38.4■■■■□ 3.74
MRPL4-202ENST00000307422 SMARCA4P51532 1647 aa37.85■■■■□ 3.65
MRPL4-202ENST00000307422 BAZ1AQ9NRL2 1556 aaPredicted RBP37.76■■■■□ 3.64
MRPL4-202ENST00000307422 NCAPD3P42695 1498 aa37.7■■■■□ 3.63
MRPL4-202ENST00000307422 ATAD2BQ9ULI0 1458 aa37.67■■■■□ 3.62
MRPL4-202ENST00000307422 SMARCA2P51531 1590 aa37.66■■■■□ 3.62
MRPL4-202ENST00000307422 HMGXB3Q12766 1538 aa37.54■■■■□ 3.6
MRPL4-202ENST00000307422 PEG3Q9GZU2 1588 aa37.5■■■■□ 3.59
MRPL4-202ENST00000307422 MROH2BQ7Z745 1585 aa37.48■■■■□ 3.59
MRPL4-202ENST00000307422 BAZ1BQ9UIG0 1483 aaKnown RBP37.36■■■■□ 3.57
MRPL4-202ENST00000307422 WIZO95785 1651 aa37.08■■■■□ 3.53
MRPL4-202ENST00000307422 RSF1Q96T23 1441 aaPredicted RBP36.94■■■■□ 3.5
MRPL4-202ENST00000307422 NESP48681 1621 aa36.85■■■■□ 3.49
MRPL4-202ENST00000307422 ERCC6Q03468 1493 aa36.83■■■■□ 3.49
MRPL4-202ENST00000307422 LAMC3Q9Y6N6 1575 aa36.8■■■■□ 3.48
MRPL4-202ENST00000307422 TOP2AP11388 1531 aaKnown RBP36.69■■■■□ 3.46
MRPL4-202ENST00000307422 CUX2O14529 1486 aa36.59■■■■□ 3.45
MRPL4-202ENST00000307422 CADPSQ9ULU8 1353 aa36.57■■■■□ 3.44
MRPL4-202ENST00000307422 PDS5BQ9NTI5 1447 aa36.51■■■■□ 3.44
MRPL4-202ENST00000307422 KIF21AQ7Z4S6 1674 aa36.48■■■■□ 3.43
MRPL4-202ENST00000307422 THOC2Q8NI27 1593 aaKnown RBP36.43■■■■□ 3.42
MRPL4-202ENST00000307422 CFTRP13569 1480 aa36.32■■■■□ 3.4
MRPL4-202ENST00000307422 CCDC88BA6NC98 1476 aa36.21■■■■□ 3.39
MRPL4-202ENST00000307422 MRC2Q9UBG0 1479 aa36.17■■■■□ 3.38
MRPL4-202ENST00000307422 FANCD2Q9BXW9 1451 aa36.17■■■■□ 3.38
MRPL4-202ENST00000307422 CEP164Q9UPV0 1460 aa36.17■■■■□ 3.38
MRPL4-202ENST00000307422 PRDM2Q13029 1718 aa36.13■■■■□ 3.37
MRPL4-202ENST00000307422 WDR62O43379 1518 aa36.08■■■■□ 3.37
MRPL4-202ENST00000307422 URB2Q14146 1524 aaKnown RBP35.82■■■■□ 3.32
MRPL4-202ENST00000307422 DNAJC5Q9H3Z4 198 aa35.81■■■■□ 3.32
MRPL4-202ENST00000307422 SUPT5HO00267 1087 aaKnown RBP35.71■■■■□ 3.31
MRPL4-202ENST00000307422 ABCC8Q09428 1581 aa35.58■■■■□ 3.29
MRPL4-202ENST00000307422 TOPBP1Q92547 1522 aa35.57■■■■□ 3.28
MRPL4-202ENST00000307422 DNMBPQ6XZF7 1577 aa35.53■■■■□ 3.28
MRPL4-202ENST00000307422 IFT140Q96RY7 1462 aa35.42■■■■□ 3.26
MRPL4-202ENST00000307422 ZNF608Q9ULD9 1512 aaPredicted RBP35.25■■■■□ 3.23
MRPL4-202ENST00000307422 POLA1P09884 1462 aaPredicted RBP35.23■■■■□ 3.23
MRPL4-202ENST00000307422 TARBP1Q13395 1621 aaKnown RBP35.23■■■■□ 3.23
MRPL4-202ENST00000307422 CUX1P39880 1505 aa35.19■■■■□ 3.22
MRPL4-202ENST00000307422 EIF4G3O43432 1585 aaKnown RBP35.16■■■■□ 3.22
MRPL4-202ENST00000307422 FGD5Q6ZNL6 1462 aa35.11■■■■□ 3.21
MRPL4-202ENST00000307422 SOGA1O94964 1423 aa35.06■■■■□ 3.2
MRPL4-202ENST00000307422 RAD54L2Q9Y4B4 1467 aa35.05■■■■□ 3.2
MRPL4-202ENST00000307422 WDR97A6NE52 1622 aa34.99■■■■□ 3.19
MRPL4-202ENST00000307422 AQRO60306 1485 aaKnown RBP eCLIP34.99■■■■□ 3.198e-9■■■■■ 43.4
MRPL4-202ENST00000307422 OSCARQ8IYS5 282 aa34.94■■■■□ 3.18
MRPL4-202ENST00000307422 BIVM-ERCC5R4GMW8 1640 aa34.87■■■■□ 3.17
MRPL4-202ENST00000307422 TDRD9Q8NDG6 1382 aaKnown RBP34.87■■■■□ 3.17
MRPL4-202ENST00000307422 WRNQ14191 1432 aaPredicted RBP eCLIP34.85■■■■□ 3.17
MRPL4-202ENST00000307422 TOP2BQ02880 1626 aa34.85■■■■□ 3.17
MRPL4-202ENST00000307422 SYNJ1O43426 1573 aa34.8■■■■□ 3.16
MRPL4-202ENST00000307422 CHD1O14646 1710 aa34.78■■■■□ 3.16
MRPL4-202ENST00000307422 ABCA10Q8WWZ4 1543 aa34.78■■■■□ 3.16
MRPL4-202ENST00000307422 GRIN2BQ13224 1484 aa34.72■■■■□ 3.15
MRPL4-202ENST00000307422 SNAPC4Q5SXM2 1469 aa34.7■■■■□ 3.15
MRPL4-202ENST00000307422 ABCA5Q8WWZ7 1642 aa34.69■■■■□ 3.14
MRPL4-202ENST00000307422 PBRM1Q86U86 1689 aa34.69■■■■□ 3.14
MRPL4-202ENST00000307422 GAPVD1Q14C86 1478 aa34.68■■■■□ 3.14
MRPL4-202ENST00000307422 MAGI1Q96QZ7 1491 aaPredicted RBP34.68■■■■□ 3.14
MRPL4-202ENST00000307422 FBLN2P98095 1184 aa34.59■■■■□ 3.13
MRPL4-202ENST00000307422 SYNJ2O15056 1496 aa34.54■■■■□ 3.12
MRPL4-202ENST00000307422 RIMBP3CA6NJZ7 1639 aa34.49■■■■□ 3.11
MRPL4-202ENST00000307422 RIMBP3BA6NNM3 1639 aa34.49■■■■□ 3.11
MRPL4-202ENST00000307422 RIMBP3Q9UFD9 1639 aa34.49■■■■□ 3.11
MRPL4-202ENST00000307422 CHMP7Q8WUX9 453 aaPredicted RBP34.48■■■■□ 3.11
MRPL4-202ENST00000307422 TRIM41Q8WV44 630 aa34.48■■■■□ 3.11
MRPL4-202ENST00000307422 ARHGEF11O15085 1522 aa34.43■■■■□ 3.1
MRPL4-202ENST00000307422 CLASP1Q7Z460 1538 aa34.39■■■■□ 3.1
MRPL4-202ENST00000307422 ADAMTS12P58397 1594 aa34.38■■■■□ 3.09
MRPL4-202ENST00000307422 ERICH3Q5RHP9 1530 aa34.37■■■■□ 3.09
MRPL4-202ENST00000307422 GRIN2AQ12879 1464 aa34.28■■■■□ 3.08
MRPL4-202ENST00000307422 FHAD1B1AJZ9 1412 aa34.28■■■■□ 3.08
MRPL4-202ENST00000307422 KIF27Q86VH2 1401 aa34.15■■■■□ 3.06
MRPL4-202ENST00000307422 NUP160Q12769 1436 aa34.13■■■■□ 3.05
MRPL4-202ENST00000307422 CEP170Q5SW79 1584 aa34.13■■■■□ 3.05
MRPL4-202ENST00000307422 ARAP1Q96P48 1450 aa34.12■■■■□ 3.05
MRPL4-202ENST00000307422 CYB5RLQ6IPT4 315 aa34.04■■■■□ 3.04
MRPL4-202ENST00000307422 CUL7Q14999 1698 aa34.04■■■■□ 3.04
MRPL4-202ENST00000307422 IGF1RP08069 1367 aa34■■■■□ 3.03
MRPL4-202ENST00000307422 SHROOM2Q13796 1616 aa33.95■■■■□ 3.03
MRPL4-202ENST00000307422 RUSC2Q8N2Y8 1516 aa33.89■■■■□ 3.02
MRPL4-202ENST00000307422 ERCC6L2Q5T890 1561 aa33.84■■■■□ 3.01
MRPL4-202ENST00000307422 CARMIL1Q5VZK9 1371 aa33.81■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms