RNA–Protein interactions for RNA: ENST00000605755.5

SSX2IP-210, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2 BASIC

Gene SSX2IP, Length 1,933 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-210ENST00000605755 NISCHQ9Y2I1 1504 aa43.92■■■■■ 4.62
SSX2IP-210ENST00000605755 CCDC180Q9P1Z9 1646 aa38.72■■■■□ 3.79
SSX2IP-210ENST00000605755 ABCC9O60706 1549 aa37.47■■■■□ 3.59
SSX2IP-210ENST00000605755 ZCCHC6Q5VYS8 1495 aaKnown RBP36.7■■■■□ 3.47
SSX2IP-210ENST00000605755 DCAF8L2P0C7V8 631 aa36.56■■■■□ 3.44
SSX2IP-210ENST00000605755 DCAF1Q9Y4B6 1507 aa36.3■■■■□ 3.4
SSX2IP-210ENST00000605755 NACADO15069 1562 aa36.28■■■■□ 3.4
SSX2IP-210ENST00000605755 MYO15BQ96JP2 1530 aa36.23■■■■□ 3.39
SSX2IP-210ENST00000605755 RB1CC1Q8TDY2 1594 aa36.2■■■■□ 3.39
SSX2IP-210ENST00000605755 SCRIBQ14160 1630 aa35.47■■■■□ 3.27
SSX2IP-210ENST00000605755 UNC13AQ9UPW8 1703 aa35.42■■■■□ 3.26
SSX2IP-210ENST00000605755 SHROOM4Q9ULL8 1493 aa35.16■■■■□ 3.22
SSX2IP-210ENST00000605755 PABPN1Q86U42 306 aaKnown RBP eCLIP35.16■■■■□ 3.22
SSX2IP-210ENST00000605755 BICRAQ9NZM4 1560 aa35.15■■■■□ 3.22
SSX2IP-210ENST00000605755 CECR2Q9BXF3 1484 aa34.22■■■■□ 3.07
SSX2IP-210ENST00000605755 EIF4G1Q04637 1599 aaKnown RBP34.15■■■■□ 3.06
SSX2IP-210ENST00000605755 BAZ1AQ9NRL2 1556 aaPredicted RBP33.98■■■■□ 3.03
SSX2IP-210ENST00000605755 SMARCA4P51532 1647 aa33.95■■■■□ 3.03
SSX2IP-210ENST00000605755 DNAJC5BQ9UF47 199 aa33.94■■■■□ 3.02
SSX2IP-210ENST00000605755 MROH2BQ7Z745 1585 aa33.9■■■■□ 3.02
SSX2IP-210ENST00000605755 CC2D2AQ9P2K1 1620 aa33.88■■■■□ 3.01
SSX2IP-210ENST00000605755 RSF1Q96T23 1441 aaPredicted RBP33.71■■■□□ 2.99
SSX2IP-210ENST00000605755 ATAD2BQ9ULI0 1458 aa33.64■■■□□ 2.98
SSX2IP-210ENST00000605755 PEG3Q9GZU2 1588 aa33.58■■■□□ 2.97
SSX2IP-210ENST00000605755 SMARCA2P51531 1590 aa33.57■■■□□ 2.96
SSX2IP-210ENST00000605755 WIZO95785 1651 aa33.56■■■□□ 2.96
SSX2IP-210ENST00000605755 NCAPD3P42695 1498 aa33.51■■■□□ 2.95
SSX2IP-210ENST00000605755 BAZ1BQ9UIG0 1483 aaKnown RBP33.38■■■□□ 2.93
SSX2IP-210ENST00000605755 HMGXB3Q12766 1538 aa33.38■■■□□ 2.93
SSX2IP-210ENST00000605755 SUPT5HO00267 1087 aaKnown RBP33.36■■■□□ 2.93
SSX2IP-210ENST00000605755 TOP2AP11388 1531 aaKnown RBP33.19■■■□□ 2.9
SSX2IP-210ENST00000605755 CCDC88BA6NC98 1476 aa32.85■■■□□ 2.85
SSX2IP-210ENST00000605755 NESP48681 1621 aa32.61■■■□□ 2.81
SSX2IP-210ENST00000605755 CADPSQ9ULU8 1353 aa32.59■■■□□ 2.81
SSX2IP-210ENST00000605755 LAMC3Q9Y6N6 1575 aa32.51■■■□□ 2.8
SSX2IP-210ENST00000605755 CFTRP13569 1480 aa32.5■■■□□ 2.79
SSX2IP-210ENST00000605755 PDS5BQ9NTI5 1447 aa32.29■■■□□ 2.76
SSX2IP-210ENST00000605755 PRDM2Q13029 1718 aa32.24■■■□□ 2.75
SSX2IP-210ENST00000605755 FANCD2Q9BXW9 1451 aa32.22■■■□□ 2.75
SSX2IP-210ENST00000605755 ERCC6Q03468 1493 aa32.2■■■□□ 2.75
SSX2IP-210ENST00000605755 KIF21AQ7Z4S6 1674 aa32.19■■■□□ 2.74
SSX2IP-210ENST00000605755 CEP164Q9UPV0 1460 aa32.1■■■□□ 2.73
SSX2IP-210ENST00000605755 MRC2Q9UBG0 1479 aa31.93■■■□□ 2.7
SSX2IP-210ENST00000605755 THOC2Q8NI27 1593 aaKnown RBP31.92■■■□□ 2.7
SSX2IP-210ENST00000605755 URB2Q14146 1524 aaKnown RBP31.87■■■□□ 2.69
SSX2IP-210ENST00000605755 ABCC8Q09428 1581 aa31.85■■■□□ 2.69
SSX2IP-210ENST00000605755 WDR62O43379 1518 aa31.8■■■□□ 2.68
SSX2IP-210ENST00000605755 TOPBP1Q92547 1522 aa31.76■■■□□ 2.68
SSX2IP-210ENST00000605755 CUX1P39880 1505 aa31.76■■■□□ 2.67
SSX2IP-210ENST00000605755 WRNQ14191 1432 aaPredicted RBP eCLIP31.75■■■□□ 2.67
SSX2IP-210ENST00000605755 DNMBPQ6XZF7 1577 aa31.75■■■□□ 2.67
SSX2IP-210ENST00000605755 SYNJ1O43426 1573 aa31.66■■■□□ 2.66
SSX2IP-210ENST00000605755 CUX2O14529 1486 aa31.61■■■□□ 2.65
SSX2IP-210ENST00000605755 TOP2BQ02880 1626 aa31.6■■■□□ 2.65
SSX2IP-210ENST00000605755 BIVM-ERCC5R4GMW8 1640 aa31.58■■■□□ 2.65
SSX2IP-210ENST00000605755 FGD5Q6ZNL6 1462 aa31.55■■■□□ 2.64
SSX2IP-210ENST00000605755 POLA1P09884 1462 aaPredicted RBP31.54■■■□□ 2.64
SSX2IP-210ENST00000605755 CHIC1Q5VXU3 224 aa31.45■■■□□ 2.63
SSX2IP-210ENST00000605755 RAD54L2Q9Y4B4 1467 aa31.44■■■□□ 2.62
SSX2IP-210ENST00000605755 TRIM41Q8WV44 630 aa31.43■■■□□ 2.62
SSX2IP-210ENST00000605755 SOGA1O94964 1423 aa31.43■■■□□ 2.62
SSX2IP-210ENST00000605755 IFT140Q96RY7 1462 aa31.39■■■□□ 2.61
SSX2IP-210ENST00000605755 TARBP1Q13395 1621 aaKnown RBP31.37■■■□□ 2.61
SSX2IP-210ENST00000605755 ZNF608Q9ULD9 1512 aaPredicted RBP31.27■■■□□ 2.6
SSX2IP-210ENST00000605755 ABCA10Q8WWZ4 1543 aa31.25■■■□□ 2.59
SSX2IP-210ENST00000605755 WDR97A6NE52 1622 aa31.23■■■□□ 2.59
SSX2IP-210ENST00000605755 TDRD9Q8NDG6 1382 aaKnown RBP31.21■■■□□ 2.59
SSX2IP-210ENST00000605755 AQRO60306 1485 aaKnown RBP eCLIP31.18■■■□□ 2.581e-6■■■□□ 15
SSX2IP-210ENST00000605755 EIF4G3O43432 1585 aaKnown RBP31.13■■■□□ 2.57
SSX2IP-210ENST00000605755 ABCA5Q8WWZ7 1642 aa31.07■■■□□ 2.56
SSX2IP-210ENST00000605755 GAPVD1Q14C86 1478 aa31.06■■■□□ 2.56
SSX2IP-210ENST00000605755 RUSC2Q8N2Y8 1516 aa31.02■■■□□ 2.56
SSX2IP-210ENST00000605755 KIF27Q86VH2 1401 aa31.02■■■□□ 2.56
SSX2IP-210ENST00000605755 GRIN2BQ13224 1484 aa30.96■■■□□ 2.55
SSX2IP-210ENST00000605755 PBRM1Q86U86 1689 aa30.94■■■□□ 2.54
SSX2IP-210ENST00000605755 SNAPC4Q5SXM2 1469 aa30.87■■■□□ 2.53
SSX2IP-210ENST00000605755 IGF1RP08069 1367 aa30.87■■■□□ 2.53
SSX2IP-210ENST00000605755 ERICH3Q5RHP9 1530 aa30.86■■■□□ 2.53
SSX2IP-210ENST00000605755 FAM9AQ8IZU1 332 aaPredicted RBP30.83■■■□□ 2.53
SSX2IP-210ENST00000605755 MAGI1Q96QZ7 1491 aaPredicted RBP30.8■■■□□ 2.52
SSX2IP-210ENST00000605755 EEA1Q15075 1411 aa30.77■■■□□ 2.52
SSX2IP-210ENST00000605755 ADAMTS12P58397 1594 aa30.73■■■□□ 2.51
SSX2IP-210ENST00000605755 CSRNP3Q8WYN3 585 aa30.73■■■□□ 2.51
SSX2IP-210ENST00000605755 FHAD1B1AJZ9 1412 aa30.7■■■□□ 2.51
SSX2IP-210ENST00000605755 FBLN2P98095 1184 aa30.7■■■□□ 2.51
SSX2IP-210ENST00000605755 SYNJ2O15056 1496 aa30.69■■■□□ 2.5
SSX2IP-210ENST00000605755 CARMIL1Q5VZK9 1371 aa30.68■■■□□ 2.5
SSX2IP-210ENST00000605755 CUL7Q14999 1698 aa30.68■■■□□ 2.5
SSX2IP-210ENST00000605755 CHMP7Q8WUX9 453 aaPredicted RBP30.67■■■□□ 2.5
SSX2IP-210ENST00000605755 CHD1O14646 1710 aa30.62■■■□□ 2.49
SSX2IP-210ENST00000605755 PRXQ9BXM0 1461 aa30.59■■■□□ 2.49
SSX2IP-210ENST00000605755 GRIN2AQ12879 1464 aa30.58■■■□□ 2.49
SSX2IP-210ENST00000605755 RAPGEF2Q9Y4G8 1499 aa30.55■■■□□ 2.48
SSX2IP-210ENST00000605755 OSCARQ8IYS5 282 aa30.45■■■□□ 2.47
SSX2IP-210ENST00000605755 EHMT2Q96KQ7 1210 aa30.43■■■□□ 2.46
SSX2IP-210ENST00000605755 KIF21BO75037 1637 aa30.43■■■□□ 2.46
SSX2IP-210ENST00000605755 CEP170Q5SW79 1584 aa30.42■■■□□ 2.46
SSX2IP-210ENST00000605755 NUP160Q12769 1436 aa30.41■■■□□ 2.46
SSX2IP-210ENST00000605755 GOLGA3Q08378 1498 aa30.32■■■□□ 2.44
SSX2IP-210ENST00000605755 CLASP1Q7Z460 1538 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms