RNA–Protein interactions for RNA: ENST00000439220.6

CSK-202, Transcript of C-terminal Src kinase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSK, Length 1,900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSK-202ENST00000439220 NISCHQ9Y2I1 1504 aa41.9■■■■■ 4.3
CSK-202ENST00000439220 CCDC180Q9P1Z9 1646 aa37.07■■■■□ 3.52
CSK-202ENST00000439220 ABCC9O60706 1549 aa35.97■■■■□ 3.35
CSK-202ENST00000439220 ZCCHC6Q5VYS8 1495 aaKnown RBP35.03■■■■□ 3.2
CSK-202ENST00000439220 DCAF8L2P0C7V8 631 aa34.92■■■■□ 3.18
CSK-202ENST00000439220 NACADO15069 1562 aa34.8■■■■□ 3.16
CSK-202ENST00000439220 RB1CC1Q8TDY2 1594 aa34.75■■■■□ 3.15
CSK-202ENST00000439220 MYO15BQ96JP2 1530 aa34.73■■■■□ 3.15
CSK-202ENST00000439220 DCAF1Q9Y4B6 1507 aa34.68■■■■□ 3.14
CSK-202ENST00000439220 UNC13AQ9UPW8 1703 aa33.96■■■■□ 3.03
CSK-202ENST00000439220 SCRIBQ14160 1630 aa33.89■■■■□ 3.02
CSK-202ENST00000439220 SHROOM4Q9ULL8 1493 aa33.77■■■■□ 3
CSK-202ENST00000439220 BICRAQ9NZM4 1560 aa33.71■■■□□ 2.99
CSK-202ENST00000439220 PABPN1Q86U42 306 aaKnown RBP eCLIP33.66■■■□□ 2.98
CSK-202ENST00000439220 DNAJC5BQ9UF47 199 aa32.81■■■□□ 2.84
CSK-202ENST00000439220 EIF4G1Q04637 1599 aaKnown RBP32.79■■■□□ 2.84
CSK-202ENST00000439220 CECR2Q9BXF3 1484 aa32.67■■■□□ 2.82
CSK-202ENST00000439220 CC2D2AQ9P2K1 1620 aa32.58■■■□□ 2.81
CSK-202ENST00000439220 SMARCA4P51532 1647 aa32.4■■■□□ 2.78
CSK-202ENST00000439220 BAZ1AQ9NRL2 1556 aaPredicted RBP32.4■■■□□ 2.78
CSK-202ENST00000439220 MROH2BQ7Z745 1585 aa32.37■■■□□ 2.77
CSK-202ENST00000439220 RSF1Q96T23 1441 aaPredicted RBP32.29■■■□□ 2.76
CSK-202ENST00000439220 SUPT5HO00267 1087 aaKnown RBP32.26■■■□□ 2.75
CSK-202ENST00000439220 ATAD2BQ9ULI0 1458 aa32.17■■■□□ 2.74
CSK-202ENST00000439220 NCAPD3P42695 1498 aa32.14■■■□□ 2.74
CSK-202ENST00000439220 SMARCA2P51531 1590 aa32.12■■■□□ 2.73
CSK-202ENST00000439220 PEG3Q9GZU2 1588 aa32.12■■■□□ 2.73
CSK-202ENST00000439220 WIZO95785 1651 aa32.07■■■□□ 2.72
CSK-202ENST00000439220 HMGXB3Q12766 1538 aa31.98■■■□□ 2.71
CSK-202ENST00000439220 BAZ1BQ9UIG0 1483 aaKnown RBP31.88■■■□□ 2.69
CSK-202ENST00000439220 TOP2AP11388 1531 aaKnown RBP31.67■■■□□ 2.66
CSK-202ENST00000439220 CCDC88BA6NC98 1476 aa31.35■■■□□ 2.61
CSK-202ENST00000439220 NESP48681 1621 aa31.22■■■□□ 2.59
CSK-202ENST00000439220 LAMC3Q9Y6N6 1575 aa31.21■■■□□ 2.59
CSK-202ENST00000439220 CADPSQ9ULU8 1353 aa31.19■■■□□ 2.58
CSK-202ENST00000439220 CFTRP13569 1480 aa31.08■■■□□ 2.57
CSK-202ENST00000439220 PDS5BQ9NTI5 1447 aa30.99■■■□□ 2.55
CSK-202ENST00000439220 ERCC6Q03468 1493 aa30.96■■■□□ 2.55
CSK-202ENST00000439220 KIF21AQ7Z4S6 1674 aa30.85■■■□□ 2.53
CSK-202ENST00000439220 PRDM2Q13029 1718 aa30.82■■■□□ 2.52
CSK-202ENST00000439220 FANCD2Q9BXW9 1451 aa30.81■■■□□ 2.52
CSK-202ENST00000439220 CEP164Q9UPV0 1460 aa30.73■■■□□ 2.51
CSK-202ENST00000439220 THOC2Q8NI27 1593 aaKnown RBP30.71■■■□□ 2.51
CSK-202ENST00000439220 MRC2Q9UBG0 1479 aa30.64■■■□□ 2.49
CSK-202ENST00000439220 CHIC1Q5VXU3 224 aa30.63■■■□□ 2.49
CSK-202ENST00000439220 CUX2O14529 1486 aa30.6■■■□□ 2.49
CSK-202ENST00000439220 WDR62O43379 1518 aa30.55■■■□□ 2.48
CSK-202ENST00000439220 URB2Q14146 1524 aaKnown RBP30.48■■■□□ 2.47
CSK-202ENST00000439220 ABCC8Q09428 1581 aa30.48■■■□□ 2.47
CSK-202ENST00000439220 WRNQ14191 1432 aaPredicted RBP eCLIP30.38■■■□□ 2.45
CSK-202ENST00000439220 TRIM41Q8WV44 630 aa30.36■■■□□ 2.45
CSK-202ENST00000439220 TOPBP1Q92547 1522 aa30.35■■■□□ 2.45
CSK-202ENST00000439220 DNMBPQ6XZF7 1577 aa30.34■■■□□ 2.45
CSK-202ENST00000439220 CUX1P39880 1505 aa30.31■■■□□ 2.44
CSK-202ENST00000439220 SYNJ1O43426 1573 aa30.24■■■□□ 2.43
CSK-202ENST00000439220 TOP2BQ02880 1626 aa30.15■■■□□ 2.42
CSK-202ENST00000439220 BIVM-ERCC5R4GMW8 1640 aa30.15■■■□□ 2.42
CSK-202ENST00000439220 POLA1P09884 1462 aaPredicted RBP30.12■■■□□ 2.41
CSK-202ENST00000439220 FGD5Q6ZNL6 1462 aa30.11■■■□□ 2.41
CSK-202ENST00000439220 IFT140Q96RY7 1462 aa30.09■■■□□ 2.41
CSK-202ENST00000439220 RAD54L2Q9Y4B4 1467 aa30.02■■■□□ 2.4
CSK-202ENST00000439220 TARBP1Q13395 1621 aaKnown RBP30.02■■■□□ 2.4
CSK-202ENST00000439220 SOGA1O94964 1423 aa29.99■■■□□ 2.39
CSK-202ENST00000439220 ZNF608Q9ULD9 1512 aaPredicted RBP29.93■■■□□ 2.38
CSK-202ENST00000439220 WDR97A6NE52 1622 aa29.82■■■□□ 2.36
CSK-202ENST00000439220 ABCA10Q8WWZ4 1543 aa29.82■■■□□ 2.36
CSK-202ENST00000439220 EIF4G3O43432 1585 aaKnown RBP29.81■■■□□ 2.36
CSK-202ENST00000439220 AQRO60306 1485 aaKnown RBP eCLIP29.79■■■□□ 2.363e-6■■■■□ 24.7
CSK-202ENST00000439220 FAM9AQ8IZU1 332 aaPredicted RBP29.79■■■□□ 2.36
CSK-202ENST00000439220 TDRD9Q8NDG6 1382 aaKnown RBP29.79■■■□□ 2.36
CSK-202ENST00000439220 RUSC2Q8N2Y8 1516 aa29.78■■■□□ 2.36
CSK-202ENST00000439220 ABCA5Q8WWZ7 1642 aa29.66■■■□□ 2.34
CSK-202ENST00000439220 GAPVD1Q14C86 1478 aa29.65■■■□□ 2.34
CSK-202ENST00000439220 KIF27Q86VH2 1401 aa29.65■■■□□ 2.34
CSK-202ENST00000439220 EEA1Q15075 1411 aa29.64■■■□□ 2.34
CSK-202ENST00000439220 GRIN2BQ13224 1484 aa29.61■■■□□ 2.33
CSK-202ENST00000439220 CSRNP3Q8WYN3 585 aa29.59■■■□□ 2.33
CSK-202ENST00000439220 PBRM1Q86U86 1689 aa29.55■■■□□ 2.32
CSK-202ENST00000439220 SNAPC4Q5SXM2 1469 aa29.51■■■□□ 2.32
CSK-202ENST00000439220 MAGI1Q96QZ7 1491 aaPredicted RBP29.51■■■□□ 2.31
CSK-202ENST00000439220 IGF1RP08069 1367 aa29.5■■■□□ 2.31
CSK-202ENST00000439220 ERICH3Q5RHP9 1530 aa29.47■■■□□ 2.31
CSK-202ENST00000439220 LOC105371045A0A1W2PR82 267 aa29.45■■■□□ 2.3
CSK-202ENST00000439220 SYNJ2O15056 1496 aa29.39■■■□□ 2.3
CSK-202ENST00000439220 EHMT2Q96KQ7 1210 aa29.38■■■□□ 2.29
CSK-202ENST00000439220 OSCARQ8IYS5 282 aa29.37■■■□□ 2.29
CSK-202ENST00000439220 CHD1O14646 1710 aa29.36■■■□□ 2.29
CSK-202ENST00000439220 DNAJC5Q9H3Z4 198 aa29.35■■■□□ 2.29
CSK-202ENST00000439220 PRXQ9BXM0 1461 aa29.35■■■□□ 2.29
CSK-202ENST00000439220 ADAMTS12P58397 1594 aa29.35■■■□□ 2.29
CSK-202ENST00000439220 FBLN2P98095 1184 aa29.33■■■□□ 2.29
CSK-202ENST00000439220 CHMP7Q8WUX9 453 aaPredicted RBP29.33■■■□□ 2.29
CSK-202ENST00000439220 FHAD1B1AJZ9 1412 aa29.32■■■□□ 2.28
CSK-202ENST00000439220 CARMIL1Q5VZK9 1371 aa29.31■■■□□ 2.28
CSK-202ENST00000439220 CUL7Q14999 1698 aa29.27■■■□□ 2.28
CSK-202ENST00000439220 RAPGEF2Q9Y4G8 1499 aa29.26■■■□□ 2.27
CSK-202ENST00000439220 KIF21BO75037 1637 aa29.25■■■□□ 2.27
CSK-202ENST00000439220 GRIN2AQ12879 1464 aa29.23■■■□□ 2.27
CSK-202ENST00000439220 GOLGA3Q08378 1498 aa29.21■■■□□ 2.27
CSK-202ENST00000439220 UBTFP17480 764 aaKnown RBP29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms