RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 NISCHQ9Y2I1 1504 aa41.08■■■■■ 4.17
C9orf43-202ENST00000374165 CCDC180Q9P1Z9 1646 aa36.04■■■■□ 3.36
C9orf43-202ENST00000374165 ABCC9O60706 1549 aa34.7■■■■□ 3.15
C9orf43-202ENST00000374165 ZCCHC6Q5VYS8 1495 aaKnown RBP34.37■■■■□ 3.09
C9orf43-202ENST00000374165 DCAF8L2P0C7V8 631 aa34.18■■■■□ 3.06
C9orf43-202ENST00000374165 DCAF1Q9Y4B6 1507 aa33.9■■■■□ 3.02
C9orf43-202ENST00000374165 MYO15BQ96JP2 1530 aa33.72■■■□□ 2.99
C9orf43-202ENST00000374165 NACADO15069 1562 aa33.71■■■□□ 2.99
C9orf43-202ENST00000374165 RB1CC1Q8TDY2 1594 aa33.56■■■□□ 2.96
C9orf43-202ENST00000374165 SHROOM4Q9ULL8 1493 aa33.16■■■□□ 2.9
C9orf43-202ENST00000374165 SCRIBQ14160 1630 aa33.13■■■□□ 2.89
C9orf43-202ENST00000374165 UNC13AQ9UPW8 1703 aa32.98■■■□□ 2.87
C9orf43-202ENST00000374165 BICRAQ9NZM4 1560 aa32.65■■■□□ 2.82
C9orf43-202ENST00000374165 PABPN1Q86U42 306 aaKnown RBP eCLIP32.64■■■□□ 2.82
C9orf43-202ENST00000374165 CECR2Q9BXF3 1484 aa32.03■■■□□ 2.72
C9orf43-202ENST00000374165 MROH2BQ7Z745 1585 aa31.75■■■□□ 2.67
C9orf43-202ENST00000374165 BAZ1AQ9NRL2 1556 aaPredicted RBP31.73■■■□□ 2.67
C9orf43-202ENST00000374165 SMARCA4P51532 1647 aa31.7■■■□□ 2.66
C9orf43-202ENST00000374165 EIF4G1Q04637 1599 aaKnown RBP31.68■■■□□ 2.66
C9orf43-202ENST00000374165 RSF1Q96T23 1441 aaPredicted RBP31.66■■■□□ 2.66
C9orf43-202ENST00000374165 SUPT5HO00267 1087 aaKnown RBP31.6■■■□□ 2.65
C9orf43-202ENST00000374165 WIZO95785 1651 aa31.47■■■□□ 2.63
C9orf43-202ENST00000374165 CC2D2AQ9P2K1 1620 aa31.38■■■□□ 2.61
C9orf43-202ENST00000374165 ATAD2BQ9ULI0 1458 aa31.33■■■□□ 2.61
C9orf43-202ENST00000374165 PEG3Q9GZU2 1588 aa31.32■■■□□ 2.6
C9orf43-202ENST00000374165 SMARCA2P51531 1590 aa31.24■■■□□ 2.59
C9orf43-202ENST00000374165 DNAJC5BQ9UF47 199 aa31.24■■■□□ 2.59
C9orf43-202ENST00000374165 NCAPD3P42695 1498 aa31.15■■■□□ 2.58
C9orf43-202ENST00000374165 BAZ1BQ9UIG0 1483 aaKnown RBP31.09■■■□□ 2.57
C9orf43-202ENST00000374165 TOP2AP11388 1531 aaKnown RBP31.05■■■□□ 2.56
C9orf43-202ENST00000374165 HMGXB3Q12766 1538 aa31.02■■■□□ 2.56
C9orf43-202ENST00000374165 CCDC88BA6NC98 1476 aa30.78■■■□□ 2.52
C9orf43-202ENST00000374165 NESP48681 1621 aa30.31■■■□□ 2.44
C9orf43-202ENST00000374165 CADPSQ9ULU8 1353 aa30.31■■■□□ 2.44
C9orf43-202ENST00000374165 CFTRP13569 1480 aa30.3■■■□□ 2.44
C9orf43-202ENST00000374165 LAMC3Q9Y6N6 1575 aa30.16■■■□□ 2.42
C9orf43-202ENST00000374165 PRDM2Q13029 1718 aa30.09■■■□□ 2.41
C9orf43-202ENST00000374165 FANCD2Q9BXW9 1451 aa29.98■■■□□ 2.39
C9orf43-202ENST00000374165 ABCC8Q09428 1581 aa29.98■■■□□ 2.39
C9orf43-202ENST00000374165 PDS5BQ9NTI5 1447 aa29.94■■■□□ 2.38
C9orf43-202ENST00000374165 CHIC1Q5VXU3 224 aa29.93■■■□□ 2.38
C9orf43-202ENST00000374165 KIF21AQ7Z4S6 1674 aa29.91■■■□□ 2.38
C9orf43-202ENST00000374165 CEP164Q9UPV0 1460 aa29.83■■■□□ 2.37
C9orf43-202ENST00000374165 WRNQ14191 1432 aaPredicted RBP eCLIP29.79■■■□□ 2.36
C9orf43-202ENST00000374165 ERCC6Q03468 1493 aa29.75■■■□□ 2.35
C9orf43-202ENST00000374165 SYNJ1O43426 1573 aa29.73■■■□□ 2.35
C9orf43-202ENST00000374165 CUX1P39880 1505 aa29.72■■■□□ 2.35
C9orf43-202ENST00000374165 TRIM41Q8WV44 630 aa29.71■■■□□ 2.35
C9orf43-202ENST00000374165 URB2Q14146 1524 aaKnown RBP29.67■■■□□ 2.34
C9orf43-202ENST00000374165 TOP2BQ02880 1626 aa29.62■■■□□ 2.33
C9orf43-202ENST00000374165 MRC2Q9UBG0 1479 aa29.6■■■□□ 2.33
C9orf43-202ENST00000374165 TOPBP1Q92547 1522 aa29.59■■■□□ 2.33
C9orf43-202ENST00000374165 BIVM-ERCC5R4GMW8 1640 aa29.59■■■□□ 2.33
C9orf43-202ENST00000374165 DNMBPQ6XZF7 1577 aa29.58■■■□□ 2.33
C9orf43-202ENST00000374165 THOC2Q8NI27 1593 aaKnown RBP29.55■■■□□ 2.32
C9orf43-202ENST00000374165 WDR62O43379 1518 aa29.48■■■□□ 2.31
C9orf43-202ENST00000374165 FGD5Q6ZNL6 1462 aa29.47■■■□□ 2.31
C9orf43-202ENST00000374165 POLA1P09884 1462 aaPredicted RBP29.42■■■□□ 2.3
C9orf43-202ENST00000374165 RAD54L2Q9Y4B4 1467 aa29.35■■■□□ 2.29
C9orf43-202ENST00000374165 CUX2O14529 1486 aa29.31■■■□□ 2.28
C9orf43-202ENST00000374165 SOGA1O94964 1423 aa29.3■■■□□ 2.28
C9orf43-202ENST00000374165 RUSC2Q8N2Y8 1516 aa29.25■■■□□ 2.27
C9orf43-202ENST00000374165 TARBP1Q13395 1621 aaKnown RBP29.22■■■□□ 2.27
C9orf43-202ENST00000374165 FAM9AQ8IZU1 332 aaPredicted RBP29.2■■■□□ 2.27
C9orf43-202ENST00000374165 ABCA10Q8WWZ4 1543 aa29.17■■■□□ 2.26
C9orf43-202ENST00000374165 WDR97A6NE52 1622 aa29.14■■■□□ 2.26
C9orf43-202ENST00000374165 IFT140Q96RY7 1462 aa29.13■■■□□ 2.25
C9orf43-202ENST00000374165 TDRD9Q8NDG6 1382 aaKnown RBP29.12■■■□□ 2.25
C9orf43-202ENST00000374165 ZNF608Q9ULD9 1512 aaPredicted RBP29.09■■■□□ 2.25
C9orf43-202ENST00000374165 KIF27Q86VH2 1401 aa29.06■■■□□ 2.24
C9orf43-202ENST00000374165 AQRO60306 1485 aaKnown RBP eCLIP29.04■■■□□ 2.24
C9orf43-202ENST00000374165 ABCA5Q8WWZ7 1642 aa28.99■■■□□ 2.23
C9orf43-202ENST00000374165 GAPVD1Q14C86 1478 aa28.97■■■□□ 2.23
C9orf43-202ENST00000374165 CSRNP3Q8WYN3 585 aa28.96■■■□□ 2.23
C9orf43-202ENST00000374165 EEA1Q15075 1411 aa28.96■■■□□ 2.23
C9orf43-202ENST00000374165 EIF4G3O43432 1585 aaKnown RBP28.93■■■□□ 2.22
C9orf43-202ENST00000374165 IGF1RP08069 1367 aa28.93■■■□□ 2.22
C9orf43-202ENST00000374165 EHMT2Q96KQ7 1210 aa28.86■■■□□ 2.21
C9orf43-202ENST00000374165 PBRM1Q86U86 1689 aa28.84■■■□□ 2.21
C9orf43-202ENST00000374165 LOC105371045A0A1W2PR82 267 aa28.82■■■□□ 2.2
C9orf43-202ENST00000374165 GRIN2BQ13224 1484 aa28.8■■■□□ 2.2
C9orf43-202ENST00000374165 ERICH3Q5RHP9 1530 aa28.8■■■□□ 2.2
C9orf43-202ENST00000374165 PRXQ9BXM0 1461 aa28.75■■■□□ 2.19
C9orf43-202ENST00000374165 CARMIL1Q5VZK9 1371 aa28.74■■■□□ 2.19
C9orf43-202ENST00000374165 SNAPC4Q5SXM2 1469 aa28.71■■■□□ 2.19
C9orf43-202ENST00000374165 RAPGEF2Q9Y4G8 1499 aa28.7■■■□□ 2.18
C9orf43-202ENST00000374165 CUL7Q14999 1698 aa28.68■■■□□ 2.18
C9orf43-202ENST00000374165 KIF21BO75037 1637 aa28.67■■■□□ 2.18
C9orf43-202ENST00000374165 ADAMTS12P58397 1594 aa28.64■■■□□ 2.18
C9orf43-202ENST00000374165 MAGI1Q96QZ7 1491 aaPredicted RBP28.62■■■□□ 2.17
C9orf43-202ENST00000374165 FHAD1B1AJZ9 1412 aa28.61■■■□□ 2.17
C9orf43-202ENST00000374165 GOLGA3Q08378 1498 aa28.58■■■□□ 2.17
C9orf43-202ENST00000374165 FBLN2P98095 1184 aa28.55■■■□□ 2.16
C9orf43-202ENST00000374165 UBTFP17480 764 aaKnown RBP28.53■■■□□ 2.16
C9orf43-202ENST00000374165 SYNJ2O15056 1496 aa28.53■■■□□ 2.16
C9orf43-202ENST00000374165 CHMP7Q8WUX9 453 aaPredicted RBP28.51■■■□□ 2.15
C9orf43-202ENST00000374165 GRIN2AQ12879 1464 aa28.47■■■□□ 2.15
C9orf43-202ENST00000374165 CHD1O14646 1710 aa28.44■■■□□ 2.14
C9orf43-202ENST00000374165 TNIKQ9UKE5 1360 aa28.4■■■□□ 2.14
C9orf43-202ENST00000374165 CEP170Q5SW79 1584 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms