Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.392e-12■■□□□ 12.5
CSTF2TQ9H0L4 SLC27A1-206ENST00000599380 2596 ntTSL 517.4■□□□□ 0.382e-6■■□□□ 12.5
CSTF2TQ9H0L4 PCMT1-207ENST00000484601 1095 ntTSL 516.75■□□□□ 0.272e-12■■□□□ 12.5
CSTF2TQ9H0L4 PCMT1-204ENST00000460828 582 ntTSL 516.23■□□□□ 0.192e-12■■□□□ 12.5
CSTF2TQ9H0L4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.012e-6■■□□□ 12.5
CSTF2TQ9H0L4 PCMT1-210ENST00000495487 548 ntTSL 314.45□□□□□ -0.12e-12■■□□□ 12.5
CSTF2TQ9H0L4 PCMT1-208ENST00000486585 801 ntTSL 39.4□□□□□ -0.92e-12■■□□□ 12.5
CSTF2TQ9H0L4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.111e-8■■□□□ 12.5
CSTF2TQ9H0L4 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.461e-7■■□□□ 12.5
CSTF2TQ9H0L4 ELOVL6-205ENST00000506625 610 ntTSL 48.95□□□□□ -0.981e-7■■□□□ 12.5
CSTF2TQ9H0L4 ELOVL6-204ENST00000506461 575 ntTSL 48.33□□□□□ -1.081e-7■■□□□ 12.5
CSTF2TQ9H0L4 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.451e-7■■□□□ 12.5
CSTF2TQ9H0L4 ELOVL6-208ENST00000514184 607 ntTSL 35.59□□□□□ -1.511e-7■■□□□ 12.5
CSTF2TQ9H0L4 ELOVL6-203ENST00000503885 458 ntTSL 44.95□□□□□ -1.621e-7■■□□□ 12.5
CSTF2TQ9H0L4 COMT-207ENST00000412786 871 ntAPPRIS ALT2 TSL 215.18■□□□□ 0.022e-6■■□□□ 12.5
CSTF2TQ9H0L4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.022e-6■■□□□ 12.5
CSTF2TQ9H0L4 COMT-201ENST00000207636 1319 ntTSL 514.3□□□□□ -0.122e-6■■□□□ 12.5
CSTF2TQ9H0L4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.122e-6■■□□□ 12.5
CSTF2TQ9H0L4 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC12.35□□□□□ -0.438e-10■■□□□ 12.5
CSTF2TQ9H0L4 STAG1-203ENST00000434713 5064 ntTSL 5 BASIC11.45□□□□□ -0.588e-10■■□□□ 12.5
CSTF2TQ9H0L4 STAG1-210ENST00000629124 4322 ntTSL 5 BASIC9.79□□□□□ -0.848e-10■■□□□ 12.5
CSTF2TQ9H0L4 STAG1-207ENST00000483235 5206 ntTSL 1 (best)9.72□□□□□ -0.858e-10■■□□□ 12.5
CSTF2TQ9H0L4 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.118e-10■■□□□ 12.5
CSTF2TQ9H0L4 STAG1-208ENST00000487065 2914 ntTSL 1 (best)6.61□□□□□ -1.358e-10■■□□□ 12.5
CSTF2TQ9H0L4 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.57□□□□□ -1.368e-10■■□□□ 12.5
CSTF2TQ9H0L4 FBXL19-206ENST00000562798 299 ntTSL 416.74■□□□□ 0.273e-9■■□□□ 12.5
CSTF2TQ9H0L4 BCL6-203ENST00000419510 4178 ntTSL 28.36□□□□□ -1.072e-12■■□□□ 12.5
CSTF2TQ9H0L4 INPP5A-206ENST00000487614 870 ntTSL 516.44■□□□□ 0.222e-6■■□□□ 12.5
CSTF2TQ9H0L4 SMTN-206ENST00000422839 566 ntTSL 413.01□□□□□ -0.331e-7■■□□□ 12.5
CSTF2TQ9H0L4 SMTN-209ENST00000432777 567 ntTSL 37.7□□□□□ -1.181e-7■■□□□ 12.5
CSTF2TQ9H0L4 IGDCC3-203ENST00000559058 564 ntTSL 522.81■■□□□ 1.241e-7■■□□□ 12.5
CSTF2TQ9H0L4 AC111170.3-201ENST00000624282 2464 ntBASIC12.95□□□□□ -0.341e-6■■□□□ 12.5
CSTF2TQ9H0L4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.146e-7■■□□□ 12.5
CSTF2TQ9H0L4 LTBP4-206ENST00000546155 1285 ntTSL 218.87■□□□□ 0.615e-11■■□□□ 12.5
CSTF2TQ9H0L4 LTBP4-232ENST00000610893 578 ntTSL 418.76■□□□□ 0.595e-11■■□□□ 12.5
CSTF2TQ9H0L4 LTBP4-239ENST00000622565 756 ntTSL 418.14■□□□□ 0.495e-11■■□□□ 12.5
CSTF2TQ9H0L4 LTBP4-231ENST00000602251 671 ntTSL 217.58■□□□□ 0.45e-11■■□□□ 12.5
CSTF2TQ9H0L4 LTBP4-229ENST00000601032 2019 ntTSL 1 (best)16.54■□□□□ 0.245e-11■■□□□ 12.5
CSTF2TQ9H0L4 LTBP4-212ENST00000595118 2446 ntTSL 215.89■□□□□ 0.135e-11■■□□□ 12.5
CSTF2TQ9H0L4 LTBP4-226ENST00000599724 910 ntTSL 514.9□□□□□ -0.025e-11■■□□□ 12.5
CSTF2TQ9H0L4 LTBP4-233ENST00000612121 755 ntTSL 314.81□□□□□ -0.045e-11■■□□□ 12.5
CSTF2TQ9H0L4 LTBP4-234ENST00000612845 527 ntTSL 414.01□□□□□ -0.175e-11■■□□□ 12.5
CSTF2TQ9H0L4 LTBP4-228ENST00000600499 580 ntTSL 213.48□□□□□ -0.255e-11■■□□□ 12.5
CSTF2TQ9H0L4 LTBP4-202ENST00000243562 3140 ntTSL 213.08□□□□□ -0.315e-11■■□□□ 12.5
CSTF2TQ9H0L4 LTBP4-216ENST00000597071 670 ntTSL 212.26□□□□□ -0.455e-11■■□□□ 12.5
CSTF2TQ9H0L4 PRR5-210ENST00000459857 560 ntTSL 418.49■□□□□ 0.552e-6■■□□□ 12.5
CSTF2TQ9H0L4 PRR5-213ENST00000492289 735 ntTSL 317.71■□□□□ 0.432e-6■■□□□ 12.5
CSTF2TQ9H0L4 AC024580.1-201ENST00000623020 674 ntBASIC7.43□□□□□ -1.223e-7■■□□□ 12.5
CSTF2TQ9H0L4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.041e-13■■□□□ 12.5
CSTF2TQ9H0L4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.251e-13■■□□□ 12.5
CSTF2TQ9H0L4 HNRNPH3-207ENST00000480987 752 ntTSL 412□□□□□ -0.491e-13■■□□□ 12.5
CSTF2TQ9H0L4 HNRNPH3-205ENST00000469172 3356 ntTSL 29.49□□□□□ -0.891e-13■■□□□ 12.5
CSTF2TQ9H0L4 HNRNPH3-203ENST00000461310 648 ntTSL 57.71□□□□□ -1.181e-13■■□□□ 12.5
CSTF2TQ9H0L4 HNRNPH3-204ENST00000467249 566 ntTSL 27.23□□□□□ -1.251e-13■■□□□ 12.5
CSTF2TQ9H0L4 HNRNPH3-209ENST00000486854 635 ntTSL 25.82□□□□□ -1.481e-13■■□□□ 12.5
CSTF2TQ9H0L4 GAK-204ENST00000504435 4346 ntTSL 211.14□□□□□ -0.637e-7■■□□□ 12.5
CSTF2TQ9H0L4 ETS2-203ENST00000432278 1033 ntTSL 518.06■□□□□ 0.481e-7■■□□□ 12.5
CSTF2TQ9H0L4 SMAD4-213ENST00000591914 992 ntTSL 325.48■■□□□ 1.675e-7■■□□□ 12.5
CSTF2TQ9H0L4 NUBP2-205ENST00000564227 903 ntTSL 321■□□□□ 0.951e-6■■□□□ 12.5
CSTF2TQ9H0L4 PNCK-225ENST00000473680 1232 ntTSL 220.58■□□□□ 0.895e-7■■□□□ 12.5
CSTF2TQ9H0L4 NUBP2-211ENST00000567700 2196 ntTSL 218.45■□□□□ 0.541e-6■■□□□ 12.5
CSTF2TQ9H0L4 NUBP2-212ENST00000568287 839 ntTSL 518.4■□□□□ 0.541e-6■■□□□ 12.5
CSTF2TQ9H0L4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.36■□□□□ 0.531e-6■■□□□ 12.5
CSTF2TQ9H0L4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.535e-7■■□□□ 12.5
CSTF2TQ9H0L4 NUBP2-207ENST00000565603 995 ntTSL 318.17■□□□□ 0.51e-6■■□□□ 12.5
CSTF2TQ9H0L4 NUBP2-215ENST00000568834 1173 ntTSL 218.01■□□□□ 0.471e-6■■□□□ 12.5
CSTF2TQ9H0L4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.411e-6■■□□□ 12.5
CSTF2TQ9H0L4 AC091551.1-202ENST00000588256 526 ntTSL 417.57■□□□□ 0.45e-7■■□□□ 12.5
CSTF2TQ9H0L4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.335e-7■■□□□ 12.5
CSTF2TQ9H0L4 NUBP2-202ENST00000562263 811 ntTSL 317.02■□□□□ 0.321e-6■■□□□ 12.5
CSTF2TQ9H0L4 PNCK-223ENST00000466662 464 ntTSL 316.79■□□□□ 0.285e-7■■□□□ 12.5
CSTF2TQ9H0L4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.47■□□□□ 0.235e-7■■□□□ 12.5
CSTF2TQ9H0L4 NUBP2-216ENST00000569898 582 ntTSL 316.45■□□□□ 0.221e-6■■□□□ 12.5
CSTF2TQ9H0L4 AC132938.6-201ENST00000623828 1655 ntBASIC16.34■□□□□ 0.215e-7■■□□□ 12.5
CSTF2TQ9H0L4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.3■□□□□ 0.21e-6■■□□□ 12.5
CSTF2TQ9H0L4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.85□□□□□ -0.031e-6■■□□□ 12.5
CSTF2TQ9H0L4 NUBP2-203ENST00000563136 470 ntTSL 414.05□□□□□ -0.161e-6■■□□□ 12.5
CSTF2TQ9H0L4 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.63□□□□□ -0.235e-7■■□□□ 12.5
CSTF2TQ9H0L4 MAEA-217ENST00000512842 550 ntTSL 413.42□□□□□ -0.265e-7■■□□□ 12.5
CSTF2TQ9H0L4 USP3-221ENST00000561442 542 ntTSL 513.31□□□□□ -0.285e-7■■□□□ 12.5
CSTF2TQ9H0L4 USP3-205ENST00000557884 958 ntTSL 313.31□□□□□ -0.285e-7■■□□□ 12.5
CSTF2TQ9H0L4 MAMDC4-205ENST00000485732 4112 ntTSL 1 (best)13.09□□□□□ -0.315e-7■■□□□ 12.5
CSTF2TQ9H0L4 USP3-202ENST00000380324 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.75e-7■■□□□ 12.5
CSTF2TQ9H0L4 USP3-206ENST00000558157 2439 ntTSL 1 (best)10.6□□□□□ -0.715e-7■■□□□ 12.5
CSTF2TQ9H0L4 USP3-219ENST00000561326 543 ntTSL 49.34□□□□□ -0.915e-7■■□□□ 12.5
CSTF2TQ9H0L4 USP3-216ENST00000559873 584 ntTSL 59.33□□□□□ -0.925e-7■■□□□ 12.5
CSTF2TQ9H0L4 USP3-217ENST00000560070 545 ntTSL 48□□□□□ -1.135e-7■■□□□ 12.5
CSTF2TQ9H0L4 SMAD4-206ENST00000588860 779 ntTSL 47.76□□□□□ -1.175e-7■■□□□ 12.5
CSTF2TQ9H0L4 USP3-210ENST00000559192 5499 ntTSL 1 (best)6.7□□□□□ -1.345e-7■■□□□ 12.5
CSTF2TQ9H0L4 SMAD4-210ENST00000590061 544 ntTSL 46.67□□□□□ -1.345e-7■■□□□ 12.5
CSTF2TQ9H0L4 SMAD4-207ENST00000589076 576 ntTSL 55.79□□□□□ -1.485e-7■■□□□ 12.5
CSTF2TQ9H0L4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.685e-7■■□□□ 12.5
CSTF2TQ9H0L4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.05□□□□□ -1.765e-7■■□□□ 12.5
CSTF2TQ9H0L4 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.62□□□□□ -0.394e-7■■□□□ 12.4
CSTF2TQ9H0L4 SEC13-207ENST00000397105 883 ntTSL 219.46■□□□□ 0.717e-9■■□□□ 12.4
CSTF2TQ9H0L4 SEC13-210ENST00000428626 567 ntTSL 314.65□□□□□ -0.067e-9■■□□□ 12.4
CSTF2TQ9H0L4 SEC13-213ENST00000445064 669 ntTSL 514.65□□□□□ -0.067e-9■■□□□ 12.4
CSTF2TQ9H0L4 SEC13-206ENST00000397102 582 ntTSL 314.31□□□□□ -0.127e-9■■□□□ 12.4
CSTF2TQ9H0L4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.147e-9■■□□□ 12.4
CSTF2TQ9H0L4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.64□□□□□ -0.237e-9■■□□□ 12.4
Retrieved 100 of 19,151 protein–RNA pairs in 145.4 ms