RNA–Protein interactions for RNA: ENST00000480733.1

STAG1-206, Transcript of stromal antigen 1, humanhuman

TSL 2 BASIC

Gene STAG1, Length 1,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-206ENST00000480733 NISCHQ9Y2I1 1504 aa33.04■■■□□ 2.88
STAG1-206ENST00000480733 ABCC9O60706 1549 aa30.11■■■□□ 2.41
STAG1-206ENST00000480733 CCDC180Q9P1Z9 1646 aa29.8■■■□□ 2.36
STAG1-206ENST00000480733 DNAJC5BQ9UF47 199 aa28.49■■■□□ 2.15
STAG1-206ENST00000480733 RB1CC1Q8TDY2 1594 aa28.48■■■□□ 2.15
STAG1-206ENST00000480733 NACADO15069 1562 aa28.18■■■□□ 2.1
STAG1-206ENST00000480733 DCAF8L2P0C7V8 631 aa28■■■□□ 2.07
STAG1-206ENST00000480733 PABPN1Q86U42 306 aaKnown RBP eCLIP27.96■■■□□ 2.07
STAG1-206ENST00000480733 UNC13AQ9UPW8 1703 aa27.96■■■□□ 2.07
STAG1-206ENST00000480733 BICRAQ9NZM4 1560 aa27.73■■■□□ 2.03
STAG1-206ENST00000480733 MYO15BQ96JP2 1530 aa27.65■■■□□ 2.02
STAG1-206ENST00000480733 ZCCHC6Q5VYS8 1495 aaKnown RBP27.34■■□□□ 1.97
STAG1-206ENST00000480733 DCAF1Q9Y4B6 1507 aa27.22■■□□□ 1.95
STAG1-206ENST00000480733 SCRIBQ14160 1630 aa27.2■■□□□ 1.95
STAG1-206ENST00000480733 CC2D2AQ9P2K1 1620 aa27.19■■□□□ 1.94
STAG1-206ENST00000480733 SHROOM4Q9ULL8 1493 aa27.18■■□□□ 1.94
STAG1-206ENST00000480733 CECR2Q9BXF3 1484 aa27.12■■□□□ 1.93
STAG1-206ENST00000480733 EIF4G1Q04637 1599 aaKnown RBP27.04■■□□□ 1.92
STAG1-206ENST00000480733 DNAJC5Q9H3Z4 198 aa26.27■■□□□ 1.8
STAG1-206ENST00000480733 NCAPD3P42695 1498 aa26.01■■□□□ 1.75
STAG1-206ENST00000480733 CUX2O14529 1486 aa25.99■■□□□ 1.75
STAG1-206ENST00000480733 ERCC6Q03468 1493 aa25.97■■□□□ 1.75
STAG1-206ENST00000480733 ATAD2BQ9ULI0 1458 aa25.94■■□□□ 1.74
STAG1-206ENST00000480733 SMARCA4P51532 1647 aa25.88■■□□□ 1.73
STAG1-206ENST00000480733 HMGXB3Q12766 1538 aa25.83■■□□□ 1.73
STAG1-206ENST00000480733 SMARCA2P51531 1590 aa25.82■■□□□ 1.72
STAG1-206ENST00000480733 NESP48681 1621 aa25.81■■□□□ 1.72
STAG1-206ENST00000480733 BAZ1BQ9UIG0 1483 aaKnown RBP25.67■■□□□ 1.7
STAG1-206ENST00000480733 BAZ1AQ9NRL2 1556 aaPredicted RBP25.65■■□□□ 1.7
STAG1-206ENST00000480733 THOC2Q8NI27 1593 aaKnown RBP25.6■■□□□ 1.69
STAG1-206ENST00000480733 PEG3Q9GZU2 1588 aa25.58■■□□□ 1.69
STAG1-206ENST00000480733 MROH2BQ7Z745 1585 aa25.5■■□□□ 1.67
STAG1-206ENST00000480733 LAMC3Q9Y6N6 1575 aa25.5■■□□□ 1.67
STAG1-206ENST00000480733 KIF21AQ7Z4S6 1674 aa25.5■■□□□ 1.67
STAG1-206ENST00000480733 PDS5BQ9NTI5 1447 aa25.31■■□□□ 1.64
STAG1-206ENST00000480733 WIZO95785 1651 aa25.22■■□□□ 1.63
STAG1-206ENST00000480733 CADPSQ9ULU8 1353 aa25.21■■□□□ 1.63
STAG1-206ENST00000480733 MRC2Q9UBG0 1479 aa25.18■■□□□ 1.62
STAG1-206ENST00000480733 WDR62O43379 1518 aa25.14■■□□□ 1.62
STAG1-206ENST00000480733 TRIM41Q8WV44 630 aa25.09■■□□□ 1.61
STAG1-206ENST00000480733 CEP164Q9UPV0 1460 aa25.02■■□□□ 1.6
STAG1-206ENST00000480733 FANCD2Q9BXW9 1451 aa24.97■■□□□ 1.59
STAG1-206ENST00000480733 CFTRP13569 1480 aa24.88■■□□□ 1.57
STAG1-206ENST00000480733 RSF1Q96T23 1441 aaPredicted RBP24.83■■□□□ 1.57
STAG1-206ENST00000480733 TOP2AP11388 1531 aaKnown RBP24.82■■□□□ 1.56
STAG1-206ENST00000480733 URB2Q14146 1524 aaKnown RBP24.82■■□□□ 1.56
STAG1-206ENST00000480733 OSCARQ8IYS5 282 aa24.7■■□□□ 1.54
STAG1-206ENST00000480733 PRDM2Q13029 1718 aa24.69■■□□□ 1.54
STAG1-206ENST00000480733 ZNF608Q9ULD9 1512 aaPredicted RBP24.57■■□□□ 1.52
STAG1-206ENST00000480733 RIMBP3CA6NJZ7 1639 aa24.56■■□□□ 1.52
STAG1-206ENST00000480733 RIMBP3BA6NNM3 1639 aa24.56■■□□□ 1.52
STAG1-206ENST00000480733 RIMBP3Q9UFD9 1639 aa24.56■■□□□ 1.52
STAG1-206ENST00000480733 CCDC88BA6NC98 1476 aa24.54■■□□□ 1.52
STAG1-206ENST00000480733 IFT140Q96RY7 1462 aa24.5■■□□□ 1.51
STAG1-206ENST00000480733 TOPBP1Q92547 1522 aa24.47■■□□□ 1.51
STAG1-206ENST00000480733 EIF4G3O43432 1585 aaKnown RBP24.44■■□□□ 1.5
STAG1-206ENST00000480733 ARHGEF11O15085 1522 aa24.42■■□□□ 1.5
STAG1-206ENST00000480733 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
STAG1-206ENST00000480733 CHD1O14646 1710 aa24.34■■□□□ 1.49
STAG1-206ENST00000480733 TARBP1Q13395 1621 aaKnown RBP24.31■■□□□ 1.48
STAG1-206ENST00000480733 ABCC8Q09428 1581 aa24.3■■□□□ 1.48
STAG1-206ENST00000480733 AQRO60306 1485 aaKnown RBP eCLIP24.29■■□□□ 1.48
STAG1-206ENST00000480733 POLA1P09884 1462 aaPredicted RBP24.21■■□□□ 1.47
STAG1-206ENST00000480733 CYB5RLQ6IPT4 315 aa24.2■■□□□ 1.46
STAG1-206ENST00000480733 ARAP1Q96P48 1450 aa24.17■■□□□ 1.46
STAG1-206ENST00000480733 RAD54L2Q9Y4B4 1467 aa24.16■■□□□ 1.46
STAG1-206ENST00000480733 FBLN2P98095 1184 aa24.15■■□□□ 1.46
STAG1-206ENST00000480733 TDRD9Q8NDG6 1382 aaKnown RBP24.07■■□□□ 1.44
STAG1-206ENST00000480733 SOGA1O94964 1423 aa24.05■■□□□ 1.44
STAG1-206ENST00000480733 SNAPC4Q5SXM2 1469 aa24.04■■□□□ 1.44
STAG1-206ENST00000480733 FGD5Q6ZNL6 1462 aa24.03■■□□□ 1.44
STAG1-206ENST00000480733 TRHP20396 242 aaPredicted RBP24.03■■□□□ 1.44
STAG1-206ENST00000480733 CLASP1Q7Z460 1538 aa24■■□□□ 1.43
STAG1-206ENST00000480733 CUX1P39880 1505 aa23.98■■□□□ 1.43
STAG1-206ENST00000480733 WDR97A6NE52 1622 aa23.95■■□□□ 1.42
STAG1-206ENST00000480733 SYNJ1O43426 1573 aa23.91■■□□□ 1.42
STAG1-206ENST00000480733 MAGI1Q96QZ7 1491 aaPredicted RBP23.91■■□□□ 1.42
STAG1-206ENST00000480733 CHMP7Q8WUX9 453 aaPredicted RBP23.88■■□□□ 1.41
STAG1-206ENST00000480733 GRIN2BQ13224 1484 aa23.88■■□□□ 1.41
STAG1-206ENST00000480733 PBRM1Q86U86 1689 aa23.87■■□□□ 1.41
STAG1-206ENST00000480733 SYNJ2O15056 1496 aa23.84■■□□□ 1.41
STAG1-206ENST00000480733 GAPVD1Q14C86 1478 aa23.77■■□□□ 1.4
STAG1-206ENST00000480733 ABCA5Q8WWZ7 1642 aa23.75■■□□□ 1.39
STAG1-206ENST00000480733 ABCA10Q8WWZ4 1543 aa23.7■■□□□ 1.38
STAG1-206ENST00000480733 ERCC6L2Q5T890 1561 aa23.67■■□□□ 1.38
STAG1-206ENST00000480733 GRIN2AQ12879 1464 aa23.61■■□□□ 1.37
STAG1-206ENST00000480733 ADAMTS12P58397 1594 aa23.6■■□□□ 1.37
STAG1-206ENST00000480733 CEP170Q5SW79 1584 aa23.58■■□□□ 1.37
STAG1-206ENST00000480733 SUPT5HO00267 1087 aaKnown RBP23.53■■□□□ 1.36
STAG1-206ENST00000480733 BIVM-ERCC5R4GMW8 1640 aa23.52■■□□□ 1.36
STAG1-206ENST00000480733 NUP160Q12769 1436 aa23.51■■□□□ 1.35
STAG1-206ENST00000480733 WRNQ14191 1432 aaPredicted RBP eCLIP23.51■■□□□ 1.35
STAG1-206ENST00000480733 AEBP2Q6ZN18 517 aaPredicted RBP23.5■■□□□ 1.35
STAG1-206ENST00000480733 TOP2BQ02880 1626 aa23.5■■□□□ 1.35
STAG1-206ENST00000480733 SHROOM2Q13796 1616 aa23.49■■□□□ 1.35
STAG1-206ENST00000480733 FHAD1B1AJZ9 1412 aa23.44■■□□□ 1.34
STAG1-206ENST00000480733 ERICH3Q5RHP9 1530 aa23.39■■□□□ 1.33
STAG1-206ENST00000480733 KIF13AQ9H1H9 1805 aa23.38■■□□□ 1.33
STAG1-206ENST00000480733 PRG4Q92954 1404 aaPredicted RBP23.32■■□□□ 1.32
STAG1-206ENST00000480733 RUSC2Q8N2Y8 1516 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms