RNA–Protein interactions for RNA: ENST00000236698.9

STAG1-201, Transcript of stromal antigen 1, humanhuman

TSL 1 (best) BASIC

Gene STAG1, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-201ENST00000236698 SLC24A1O60721 1099 aa12.68□□□□□ -0.38
STAG1-201ENST00000236698 MYT1Q01538 1121 aa12.41□□□□□ -0.42
STAG1-201ENST00000236698 NISCHQ9Y2I1 1504 aa12.18□□□□□ -0.46
STAG1-201ENST00000236698 PELP1Q8IZL8 1130 aaKnown RBP12.09□□□□□ -0.47
STAG1-201ENST00000236698 EHMT2Q96KQ7 1210 aa12.08□□□□□ -0.47
STAG1-201ENST00000236698 ERICH6Q7L0X2 663 aa11.92□□□□□ -0.5
STAG1-201ENST00000236698 TTBK1Q5TCY1 1321 aaPredicted RBP11.92□□□□□ -0.5
STAG1-201ENST00000236698 RANGAP1P46060 587 aaPredicted RBP11.63□□□□□ -0.55
STAG1-201ENST00000236698 DAXXQ9UER7 740 aaPredicted RBP11.56□□□□□ -0.56
STAG1-201ENST00000236698 RTN4Q9NQC3 1192 aaKnown RBP11.22□□□□□ -0.61
STAG1-201ENST00000236698 PLPPR3Q6T4P5 718 aa11.18□□□□□ -0.62
STAG1-201ENST00000236698 PRKCSHP14314 528 aaPredicted RBP11.13□□□□□ -0.63
STAG1-201ENST00000236698 CHIC1Q5VXU3 224 aa11.13□□□□□ -0.63
STAG1-201ENST00000236698 EIF5BO60841 1220 aaKnown RBP11.11□□□□□ -0.63
STAG1-201ENST00000236698 NCBP3Q53F19 620 aaKnown RBP11.1□□□□□ -0.63
STAG1-201ENST00000236698 AMER1Q5JTC6 1135 aaPredicted RBP11.07□□□□□ -0.64
STAG1-201ENST00000236698 APLP2Q06481 763 aa10.89□□□□□ -0.67
STAG1-201ENST00000236698 DCAF8L2P0C7V8 631 aa10.88□□□□□ -0.67
STAG1-201ENST00000236698 TULP1O00294 542 aaPredicted RBP10.87□□□□□ -0.67
STAG1-201ENST00000236698 ARXQ96QS3 562 aa10.83□□□□□ -0.68
STAG1-201ENST00000236698 HOMEZQ8IX15 550 aa10.83□□□□□ -0.68
STAG1-201ENST00000236698 PODXL2Q9NZ53 605 aa10.82□□□□□ -0.68
STAG1-201ENST00000236698 CCER1Q8TC90 406 aaPredicted RBP10.7□□□□□ -0.7
STAG1-201ENST00000236698 TPRNQ4KMQ1 711 aa10.68□□□□□ -0.7
STAG1-201ENST00000236698 TIMELESSQ9UNS1 1208 aa10.64□□□□□ -0.71
STAG1-201ENST00000236698 BCANQ96GW7 911 aa10.62□□□□□ -0.71
STAG1-201ENST00000236698 HAP1P54257 671 aaPredicted RBP10.62□□□□□ -0.71
STAG1-201ENST00000236698 SUPT5HO00267 1087 aaKnown RBP10.6□□□□□ -0.71
STAG1-201ENST00000236698 YTHDC1Q96MU7 727 aaKnown RBP10.59□□□□□ -0.71
STAG1-201ENST00000236698 C14orf37Q86TY3 774 aa10.59□□□□□ -0.71
STAG1-201ENST00000236698 KCNA4P22459 653 aa10.58□□□□□ -0.72
STAG1-201ENST00000236698 TAOK2Q9UL54 1235 aa10.52□□□□□ -0.73
STAG1-201ENST00000236698 NPM2Q86SE8 214 aaKnown RBP10.51□□□□□ -0.73
STAG1-201ENST00000236698 POLR3GLQ9BT43 218 aa10.49□□□□□ -0.73
STAG1-201ENST00000236698 SHROOM4Q9ULL8 1493 aa10.48□□□□□ -0.73
STAG1-201ENST00000236698 BCL11AQ9H165 835 aa10.47□□□□□ -0.73
STAG1-201ENST00000236698 KLHL34Q8N239 644 aa10.46□□□□□ -0.74
STAG1-201ENST00000236698 CSRNP3Q8WYN3 585 aa10.38□□□□□ -0.75
STAG1-201ENST00000236698 FAM9AQ8IZU1 332 aaPredicted RBP10.36□□□□□ -0.75
STAG1-201ENST00000236698 GTF3C3Q9Y5Q9 886 aa10.35□□□□□ -0.75
STAG1-201ENST00000236698 NEFLP07196 543 aa10.35□□□□□ -0.75
STAG1-201ENST00000236698 CDK11BP21127 795 aaKnown RBP10.32□□□□□ -0.76
STAG1-201ENST00000236698 CDK11AQ9UQ88 783 aaPredicted RBP10.32□□□□□ -0.76
STAG1-201ENST00000236698 CENPBP07199 599 aaPredicted RBP10.3□□□□□ -0.76
STAG1-201ENST00000236698 CCDC180Q9P1Z9 1646 aa10.29□□□□□ -0.76
STAG1-201ENST00000236698 SLC4A1APQ9BWU0 796 aaKnown RBP10.29□□□□□ -0.76
STAG1-201ENST00000236698 PLEKHG5O94827 1062 aa10.28□□□□□ -0.76
STAG1-201ENST00000236698 ZCCHC6Q5VYS8 1495 aaKnown RBP10.2□□□□□ -0.78
STAG1-201ENST00000236698 PDIA4P13667 645 aaKnown RBP10.15□□□□□ -0.79
STAG1-201ENST00000236698 PDE4CQ08493 712 aa10.11□□□□□ -0.79
STAG1-201ENST00000236698 FBXO3Q9UK99 471 aa10.1□□□□□ -0.79
STAG1-201ENST00000236698 HMGB1P09429 215 aaKnown RBP10.08□□□□□ -0.8
STAG1-201ENST00000236698 PLCB2Q00722 1185 aa10.08□□□□□ -0.8
STAG1-201ENST00000236698 DCAF1Q9Y4B6 1507 aa10.08□□□□□ -0.8
STAG1-201ENST00000236698 GLIPR1L2Q4G1C9 344 aa10.06□□□□□ -0.8
STAG1-201ENST00000236698 TRIM41Q8WV44 630 aa10.06□□□□□ -0.8
STAG1-201ENST00000236698 ZEB1P37275 1124 aaPredicted RBP10.06□□□□□ -0.8
STAG1-201ENST00000236698 AEBP2Q6ZN18 517 aaPredicted RBP10.04□□□□□ -0.8
STAG1-201ENST00000236698 ARID3AQ99856 593 aa10.03□□□□□ -0.8
STAG1-201ENST00000236698 MYT1LQ9UL68 1186 aa10□□□□□ -0.81
STAG1-201ENST00000236698 ZNF326Q5BKZ1 582 aaKnown RBP9.98□□□□□ -0.81
STAG1-201ENST00000236698 PKNOX2Q96KN3 472 aa9.98□□□□□ -0.81
STAG1-201ENST00000236698 NBR1Q14596 966 aa9.97□□□□□ -0.81
STAG1-201ENST00000236698 A0A0U1RQG5 324 aaPredicted RBP9.97□□□□□ -0.81
STAG1-201ENST00000236698 UBE2Q2Q8WVN8 375 aa9.91□□□□□ -0.82
STAG1-201ENST00000236698 TMEM132AQ24JP5 1023 aa9.91□□□□□ -0.82
STAG1-201ENST00000236698 TRIM26Q12899 539 aaPredicted RBP9.9□□□□□ -0.82
STAG1-201ENST00000236698 FKBP8Q14318 412 aa9.89□□□□□ -0.83
STAG1-201ENST00000236698 MYO15BQ96JP2 1530 aa9.89□□□□□ -0.83
STAG1-201ENST00000236698 CHMP4AQ9BY43 222 aa9.88□□□□□ -0.83
STAG1-201ENST00000236698 BRD2P25440 801 aaKnown RBP9.88□□□□□ -0.83
STAG1-201ENST00000236698 CLSPNQ9HAW4 1339 aa9.88□□□□□ -0.83
STAG1-201ENST00000236698 TAF7LQ5H9L4 462 aa9.88□□□□□ -0.83
STAG1-201ENST00000236698 HSP90B1P14625 803 aaKnown RBP9.85□□□□□ -0.83
STAG1-201ENST00000236698 DHX37Q8IY37 1157 aaKnown RBP9.85□□□□□ -0.83
STAG1-201ENST00000236698 PCGF6Q9BYE7 350 aa9.83□□□□□ -0.84
STAG1-201ENST00000236698 ABCC9O60706 1549 aa9.83□□□□□ -0.84
STAG1-201ENST00000236698 CCDC9Q9Y3X0 531 aaKnown RBP9.83□□□□□ -0.84
STAG1-201ENST00000236698 NACADO15069 1562 aa9.82□□□□□ -0.84
STAG1-201ENST00000236698 PHF23Q9BUL5 403 aaPredicted RBP9.82□□□□□ -0.84
STAG1-201ENST00000236698 ARID4BQ4LE39 1312 aaPredicted RBP9.81□□□□□ -0.84
STAG1-201ENST00000236698 ZBTB7CA1YPR0 619 aa9.8□□□□□ -0.84
STAG1-201ENST00000236698 CFAP44Q96MT7 982 aa9.8□□□□□ -0.84
STAG1-201ENST00000236698 CCDC136Q96JN2 1154 aa9.78□□□□□ -0.84
STAG1-201ENST00000236698 NAP1L5Q96NT1 182 aaPredicted RBP9.78□□□□□ -0.84
STAG1-201ENST00000236698 UBTFP17480 764 aaKnown RBP9.77□□□□□ -0.85
STAG1-201ENST00000236698 RTL5Q5HYW3 569 aaPredicted RBP9.76□□□□□ -0.85
STAG1-201ENST00000236698 VSIG10Q8N0Z9 540 aa9.75□□□□□ -0.85
STAG1-201ENST00000236698 ZNF526Q8TF50 670 aaPredicted RBP9.74□□□□□ -0.85
STAG1-201ENST00000236698 PTMSP20962 102 aa9.74□□□□□ -0.85
STAG1-201ENST00000236698 HRCP23327 699 aa9.73□□□□□ -0.85
STAG1-201ENST00000236698 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.72□□□□□ -0.85
STAG1-201ENST00000236698 RB1CC1Q8TDY2 1594 aa9.7□□□□□ -0.86
STAG1-201ENST00000236698 USP35Q9P2H5 1018 aa9.67□□□□□ -0.86
STAG1-201ENST00000236698 BCL11BQ9C0K0 894 aaPredicted RBP9.67□□□□□ -0.86
STAG1-201ENST00000236698 ZNF316A6NFI3 1004 aaPredicted RBP9.63□□□□□ -0.87
STAG1-201ENST00000236698 EEA1Q15075 1411 aa9.63□□□□□ -0.87
STAG1-201ENST00000236698 RSF1Q96T23 1441 aaPredicted RBP9.63□□□□□ -0.87
STAG1-201ENST00000236698 LOC105371045A0A1W2PR82 267 aa9.63□□□□□ -0.87
STAG1-201ENST00000236698 SCRIBQ14160 1630 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms