RNA–Protein interactions for RNA: ENST00000487065.5

STAG1-208, Transcript of stromal antigen 1, humanhuman

TSL 1 (best)

Gene STAG1, Length 2,914 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-208ENST00000487065 NISCHQ9Y2I1 1504 aa18.75■□□□□ 0.59
STAG1-208ENST00000487065 CCDC180Q9P1Z9 1646 aa17.5■□□□□ 0.39
STAG1-208ENST00000487065 ABCC9O60706 1549 aa16.91■□□□□ 0.3
STAG1-208ENST00000487065 RB1CC1Q8TDY2 1594 aa16.56■□□□□ 0.24
STAG1-208ENST00000487065 NACADO15069 1562 aa16.47■□□□□ 0.23
STAG1-208ENST00000487065 MYO15BQ96JP2 1530 aa16.44■□□□□ 0.22
STAG1-208ENST00000487065 SHROOM4Q9ULL8 1493 aa16.39■□□□□ 0.21
STAG1-208ENST00000487065 UNC13AQ9UPW8 1703 aa16.09■□□□□ 0.17
STAG1-208ENST00000487065 DNAJC5BQ9UF47 199 aa16.05■□□□□ 0.16
STAG1-208ENST00000487065 BICRAQ9NZM4 1560 aa15.97■□□□□ 0.15
STAG1-208ENST00000487065 DCAF1Q9Y4B6 1507 aa15.97■□□□□ 0.15
STAG1-208ENST00000487065 CC2D2AQ9P2K1 1620 aa15.62■□□□□ 0.09
STAG1-208ENST00000487065 EIF4G1Q04637 1599 aaKnown RBP15.55■□□□□ 0.08
STAG1-208ENST00000487065 ZCCHC6Q5VYS8 1495 aaKnown RBP15.54■□□□□ 0.08
STAG1-208ENST00000487065 CECR2Q9BXF3 1484 aa15.53■□□□□ 0.08
STAG1-208ENST00000487065 CUX2O14529 1486 aa15.44■□□□□ 0.06
STAG1-208ENST00000487065 DNAJC5Q9H3Z4 198 aa15.43■□□□□ 0.06
STAG1-208ENST00000487065 PABPN1Q86U42 306 aaKnown RBP eCLIP15.34■□□□□ 0.05
STAG1-208ENST00000487065 SCRIBQ14160 1630 aa15.14■□□□□ 0.01
STAG1-208ENST00000487065 HMGXB3Q12766 1538 aa15.07■□□□□ 0
STAG1-208ENST00000487065 NCAPD3P42695 1498 aa15.06■□□□□ 0
STAG1-208ENST00000487065 SMARCA2P51531 1590 aa14.96□□□□□ -0.01
STAG1-208ENST00000487065 PEG3Q9GZU2 1588 aa14.94□□□□□ -0.02
STAG1-208ENST00000487065 THOC2Q8NI27 1593 aaKnown RBP14.89□□□□□ -0.03
STAG1-208ENST00000487065 LAMC3Q9Y6N6 1575 aa14.87□□□□□ -0.03
STAG1-208ENST00000487065 DCAF8L2P0C7V8 631 aa14.81□□□□□ -0.04
STAG1-208ENST00000487065 ATAD2BQ9ULI0 1458 aa14.77□□□□□ -0.04
STAG1-208ENST00000487065 ERCC6Q03468 1493 aa14.76□□□□□ -0.05
STAG1-208ENST00000487065 SMARCA4P51532 1647 aa14.75□□□□□ -0.05
STAG1-208ENST00000487065 BAZ1AQ9NRL2 1556 aaPredicted RBP14.67□□□□□ -0.06
STAG1-208ENST00000487065 WDR62O43379 1518 aa14.64□□□□□ -0.07
STAG1-208ENST00000487065 PDS5BQ9NTI5 1447 aa14.58□□□□□ -0.08
STAG1-208ENST00000487065 KIF21AQ7Z4S6 1674 aa14.55□□□□□ -0.08
STAG1-208ENST00000487065 BAZ1BQ9UIG0 1483 aaKnown RBP14.54□□□□□ -0.08
STAG1-208ENST00000487065 MRC2Q9UBG0 1479 aa14.53□□□□□ -0.08
STAG1-208ENST00000487065 PRDM2Q13029 1718 aa14.45□□□□□ -0.1
STAG1-208ENST00000487065 NESP48681 1621 aa14.4□□□□□ -0.1
STAG1-208ENST00000487065 CADPSQ9ULU8 1353 aa14.37□□□□□ -0.11
STAG1-208ENST00000487065 WDR97A6NE52 1622 aa14.32□□□□□ -0.12
STAG1-208ENST00000487065 CEP164Q9UPV0 1460 aa14.28□□□□□ -0.12
STAG1-208ENST00000487065 CFTRP13569 1480 aa14.24□□□□□ -0.13
STAG1-208ENST00000487065 RIMBP3CA6NJZ7 1639 aa14.21□□□□□ -0.14
STAG1-208ENST00000487065 RIMBP3BA6NNM3 1639 aa14.21□□□□□ -0.14
STAG1-208ENST00000487065 RIMBP3Q9UFD9 1639 aa14.21□□□□□ -0.14
STAG1-208ENST00000487065 MROH2BQ7Z745 1585 aa14.2□□□□□ -0.14
STAG1-208ENST00000487065 ABCC8Q09428 1581 aa14.19□□□□□ -0.14
STAG1-208ENST00000487065 IFT140Q96RY7 1462 aa14.16□□□□□ -0.14
STAG1-208ENST00000487065 FANCD2Q9BXW9 1451 aa14.15□□□□□ -0.14
STAG1-208ENST00000487065 RSF1Q96T23 1441 aaPredicted RBP14.13□□□□□ -0.15
STAG1-208ENST00000487065 TOP2AP11388 1531 aaKnown RBP14.12□□□□□ -0.15
STAG1-208ENST00000487065 OSCARQ8IYS5 282 aa14.11□□□□□ -0.15
STAG1-208ENST00000487065 URB2Q14146 1524 aaKnown RBP14.07□□□□□ -0.16
STAG1-208ENST00000487065 ARHGEF11O15085 1522 aa14.06□□□□□ -0.16
STAG1-208ENST00000487065 DNMBPQ6XZF7 1577 aa13.99□□□□□ -0.17
STAG1-208ENST00000487065 WIZO95785 1651 aa13.99□□□□□ -0.17
STAG1-208ENST00000487065 EIF4G3O43432 1585 aaKnown RBP13.96□□□□□ -0.18
STAG1-208ENST00000487065 CLASP1Q7Z460 1538 aa13.95□□□□□ -0.18
STAG1-208ENST00000487065 TARBP1Q13395 1621 aaKnown RBP13.95□□□□□ -0.18
STAG1-208ENST00000487065 TRIM41Q8WV44 630 aa13.94□□□□□ -0.18
STAG1-208ENST00000487065 CHD1O14646 1710 aa13.92□□□□□ -0.18
STAG1-208ENST00000487065 TOPBP1Q92547 1522 aa13.9□□□□□ -0.18
STAG1-208ENST00000487065 ARAP1Q96P48 1450 aa13.87□□□□□ -0.19
STAG1-208ENST00000487065 SYNJ1O43426 1573 aa13.84□□□□□ -0.19
STAG1-208ENST00000487065 MAGI1Q96QZ7 1491 aaPredicted RBP13.82□□□□□ -0.2
STAG1-208ENST00000487065 ZNF608Q9ULD9 1512 aaPredicted RBP13.75□□□□□ -0.21
STAG1-208ENST00000487065 SHROOM2Q13796 1616 aa13.69□□□□□ -0.22
STAG1-208ENST00000487065 SYNJ2O15056 1496 aa13.67□□□□□ -0.22
STAG1-208ENST00000487065 PBRM1Q86U86 1689 aa13.66□□□□□ -0.22
STAG1-208ENST00000487065 CCDC88BA6NC98 1476 aa13.66□□□□□ -0.22
STAG1-208ENST00000487065 POLA1P09884 1462 aaPredicted RBP13.66□□□□□ -0.22
STAG1-208ENST00000487065 GRIN2BQ13224 1484 aa13.65□□□□□ -0.22
STAG1-208ENST00000487065 ABCA5Q8WWZ7 1642 aa13.63□□□□□ -0.23
STAG1-208ENST00000487065 SNAPC4Q5SXM2 1469 aa13.56□□□□□ -0.24
STAG1-208ENST00000487065 ABCA10Q8WWZ4 1543 aa13.55□□□□□ -0.24
STAG1-208ENST00000487065 NUP160Q12769 1436 aa13.53□□□□□ -0.24
STAG1-208ENST00000487065 MAPKBP1O60336 1514 aa13.52□□□□□ -0.24
STAG1-208ENST00000487065 KIF13AQ9H1H9 1805 aa13.52□□□□□ -0.24
STAG1-208ENST00000487065 GAPVD1Q14C86 1478 aa13.52□□□□□ -0.25
STAG1-208ENST00000487065 ADAMTS12P58397 1594 aa13.5□□□□□ -0.25
STAG1-208ENST00000487065 SOGA1O94964 1423 aa13.5□□□□□ -0.25
STAG1-208ENST00000487065 AQRO60306 1485 aaKnown RBP eCLIP13.49□□□□□ -0.25
STAG1-208ENST00000487065 FGD5Q6ZNL6 1462 aa13.47□□□□□ -0.25
STAG1-208ENST00000487065 ERICH3Q5RHP9 1530 aa13.46□□□□□ -0.25
STAG1-208ENST00000487065 BIVM-ERCC5R4GMW8 1640 aa13.45□□□□□ -0.26
STAG1-208ENST00000487065 CUX1P39880 1505 aa13.45□□□□□ -0.26
STAG1-208ENST00000487065 CEP170Q5SW79 1584 aa13.44□□□□□ -0.26
STAG1-208ENST00000487065 CYB5RLQ6IPT4 315 aa13.43□□□□□ -0.26
STAG1-208ENST00000487065 GRIN2AQ12879 1464 aa13.42□□□□□ -0.26
STAG1-208ENST00000487065 AEBP2Q6ZN18 517 aaPredicted RBP13.41□□□□□ -0.26
STAG1-208ENST00000487065 GLI2P10070 1586 aa13.39□□□□□ -0.27
STAG1-208ENST00000487065 ABCC10Q5T3U5 1492 aa13.37□□□□□ -0.27
STAG1-208ENST00000487065 FHAD1B1AJZ9 1412 aa13.36□□□□□ -0.27
STAG1-208ENST00000487065 RAD54L2Q9Y4B4 1467 aa13.36□□□□□ -0.27
STAG1-208ENST00000487065 DIP2BQ9P265 1576 aa13.36□□□□□ -0.27
STAG1-208ENST00000487065 ERCC6L2Q5T890 1561 aa13.35□□□□□ -0.27
STAG1-208ENST00000487065 TRHP20396 242 aaPredicted RBP13.33□□□□□ -0.28
STAG1-208ENST00000487065 TOP2BQ02880 1626 aa13.32□□□□□ -0.28
STAG1-208ENST00000487065 RUSC2Q8N2Y8 1516 aa13.31□□□□□ -0.28
STAG1-208ENST00000487065 CHMP7Q8WUX9 453 aaPredicted RBP13.27□□□□□ -0.28
STAG1-208ENST00000487065 TDRD9Q8NDG6 1382 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms