RNA–Protein interactions for RNA: ENST00000569898.5

NUBP2-216, Transcript of nucleotide binding protein 2, humanhuman

TSL 3

Gene NUBP2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP2-216ENST00000569898 NISCHQ9Y2I1 1504 aa44.05■■■■■ 4.64
NUBP2-216ENST00000569898 ABCC9O60706 1549 aa39.83■■■■□ 3.97
NUBP2-216ENST00000569898 CCDC180Q9P1Z9 1646 aa39.69■■■■□ 3.94
NUBP2-216ENST00000569898 RB1CC1Q8TDY2 1594 aa37.83■■■■□ 3.65
NUBP2-216ENST00000569898 DNAJC5BQ9UF47 199 aa37.53■■■■□ 3.6
NUBP2-216ENST00000569898 NACADO15069 1562 aa37.51■■■■□ 3.6
NUBP2-216ENST00000569898 UNC13AQ9UPW8 1703 aa37.09■■■■□ 3.53
NUBP2-216ENST00000569898 DCAF8L2P0C7V8 631 aa37.07■■■■□ 3.52
NUBP2-216ENST00000569898 PABPN1Q86U42 306 aaKnown RBP eCLIP36.97■■■■□ 3.51
NUBP2-216ENST00000569898 MYO15BQ96JP2 1530 aa36.95■■■■□ 3.5
NUBP2-216ENST00000569898 BICRAQ9NZM4 1560 aa36.81■■■■□ 3.48
NUBP2-216ENST00000569898 ZCCHC6Q5VYS8 1495 aaKnown RBP36.51■■■■□ 3.44
NUBP2-216ENST00000569898 DCAF1Q9Y4B6 1507 aa36.39■■■■□ 3.42
NUBP2-216ENST00000569898 SHROOM4Q9ULL8 1493 aa36.25■■■■□ 3.39
NUBP2-216ENST00000569898 SCRIBQ14160 1630 aa36.13■■■■□ 3.37
NUBP2-216ENST00000569898 CC2D2AQ9P2K1 1620 aa36.01■■■■□ 3.36
NUBP2-216ENST00000569898 CECR2Q9BXF3 1484 aa35.9■■■■□ 3.34
NUBP2-216ENST00000569898 EIF4G1Q04637 1599 aaKnown RBP35.89■■■■□ 3.34
NUBP2-216ENST00000569898 NCAPD3P42695 1498 aa34.61■■■■□ 3.13
NUBP2-216ENST00000569898 DNAJC5Q9H3Z4 198 aa34.58■■■■□ 3.13
NUBP2-216ENST00000569898 ATAD2BQ9ULI0 1458 aa34.5■■■■□ 3.11
NUBP2-216ENST00000569898 SMARCA4P51532 1647 aa34.45■■■■□ 3.11
NUBP2-216ENST00000569898 CUX2O14529 1486 aa34.43■■■■□ 3.1
NUBP2-216ENST00000569898 HMGXB3Q12766 1538 aa34.4■■■■□ 3.1
NUBP2-216ENST00000569898 SMARCA2P51531 1590 aa34.39■■■■□ 3.1
NUBP2-216ENST00000569898 ERCC6Q03468 1493 aa34.37■■■■□ 3.09
NUBP2-216ENST00000569898 BAZ1AQ9NRL2 1556 aaPredicted RBP34.21■■■■□ 3.07
NUBP2-216ENST00000569898 NESP48681 1621 aa34.19■■■■□ 3.06
NUBP2-216ENST00000569898 BAZ1BQ9UIG0 1483 aaKnown RBP34.14■■■■□ 3.06
NUBP2-216ENST00000569898 PEG3Q9GZU2 1588 aa34.13■■■■□ 3.05
NUBP2-216ENST00000569898 MROH2BQ7Z745 1585 aa33.96■■■■□ 3.03
NUBP2-216ENST00000569898 THOC2Q8NI27 1593 aaKnown RBP33.96■■■■□ 3.03
NUBP2-216ENST00000569898 LAMC3Q9Y6N6 1575 aa33.9■■■■□ 3.02
NUBP2-216ENST00000569898 KIF21AQ7Z4S6 1674 aa33.8■■■■□ 3
NUBP2-216ENST00000569898 PDS5BQ9NTI5 1447 aa33.64■■■□□ 2.98
NUBP2-216ENST00000569898 WIZO95785 1651 aa33.56■■■□□ 2.96
NUBP2-216ENST00000569898 CADPSQ9ULU8 1353 aa33.52■■■□□ 2.96
NUBP2-216ENST00000569898 MRC2Q9UBG0 1479 aa33.43■■■□□ 2.94
NUBP2-216ENST00000569898 WDR62O43379 1518 aa33.4■■■□□ 2.94
NUBP2-216ENST00000569898 CEP164Q9UPV0 1460 aa33.24■■■□□ 2.91
NUBP2-216ENST00000569898 FANCD2Q9BXW9 1451 aa33.18■■■□□ 2.9
NUBP2-216ENST00000569898 CFTRP13569 1480 aa33.14■■■□□ 2.9
NUBP2-216ENST00000569898 RSF1Q96T23 1441 aaPredicted RBP33.13■■■□□ 2.89
NUBP2-216ENST00000569898 TOP2AP11388 1531 aaKnown RBP33.12■■■□□ 2.89
NUBP2-216ENST00000569898 URB2Q14146 1524 aaKnown RBP32.97■■■□□ 2.87
NUBP2-216ENST00000569898 TRIM41Q8WV44 630 aa32.95■■■□□ 2.87
NUBP2-216ENST00000569898 PRDM2Q13029 1718 aa32.9■■■□□ 2.86
NUBP2-216ENST00000569898 CCDC88BA6NC98 1476 aa32.69■■■□□ 2.82
NUBP2-216ENST00000569898 OSCARQ8IYS5 282 aa32.69■■■□□ 2.82
NUBP2-216ENST00000569898 ZNF608Q9ULD9 1512 aaPredicted RBP32.58■■■□□ 2.81
NUBP2-216ENST00000569898 IFT140Q96RY7 1462 aa32.58■■■□□ 2.81
NUBP2-216ENST00000569898 TOPBP1Q92547 1522 aa32.55■■■□□ 2.8
NUBP2-216ENST00000569898 RIMBP3CA6NJZ7 1639 aa32.47■■■□□ 2.79
NUBP2-216ENST00000569898 RIMBP3BA6NNM3 1639 aa32.47■■■□□ 2.79
NUBP2-216ENST00000569898 RIMBP3Q9UFD9 1639 aa32.47■■■□□ 2.79
NUBP2-216ENST00000569898 EIF4G3O43432 1585 aaKnown RBP32.45■■■□□ 2.78
NUBP2-216ENST00000569898 DNMBPQ6XZF7 1577 aa32.43■■■□□ 2.78
NUBP2-216ENST00000569898 ABCC8Q09428 1581 aa32.39■■■□□ 2.78
NUBP2-216ENST00000569898 ARHGEF11O15085 1522 aa32.32■■■□□ 2.76
NUBP2-216ENST00000569898 TARBP1Q13395 1621 aaKnown RBP32.32■■■□□ 2.76
NUBP2-216ENST00000569898 CHD1O14646 1710 aa32.25■■■□□ 2.75
NUBP2-216ENST00000569898 AQRO60306 1485 aaKnown RBP eCLIP32.21■■■□□ 2.753e-7■■■■□ 23.2
NUBP2-216ENST00000569898 POLA1P09884 1462 aaPredicted RBP32.21■■■□□ 2.75
NUBP2-216ENST00000569898 RAD54L2Q9Y4B4 1467 aa32.07■■■□□ 2.72
NUBP2-216ENST00000569898 ARAP1Q96P48 1450 aa32.01■■■□□ 2.71
NUBP2-216ENST00000569898 SOGA1O94964 1423 aa31.97■■■□□ 2.71
NUBP2-216ENST00000569898 FGD5Q6ZNL6 1462 aa31.97■■■□□ 2.71
NUBP2-216ENST00000569898 WDR97A6NE52 1622 aa31.96■■■□□ 2.71
NUBP2-216ENST00000569898 TDRD9Q8NDG6 1382 aaKnown RBP31.95■■■□□ 2.71
NUBP2-216ENST00000569898 CYB5RLQ6IPT4 315 aa31.95■■■□□ 2.71
NUBP2-216ENST00000569898 FBLN2P98095 1184 aa31.93■■■□□ 2.7
NUBP2-216ENST00000569898 SNAPC4Q5SXM2 1469 aa31.92■■■□□ 2.7
NUBP2-216ENST00000569898 CUX1P39880 1505 aa31.92■■■□□ 2.7
NUBP2-216ENST00000569898 CLASP1Q7Z460 1538 aa31.86■■■□□ 2.69
NUBP2-216ENST00000569898 MAGI1Q96QZ7 1491 aaPredicted RBP31.81■■■□□ 2.68
NUBP2-216ENST00000569898 SYNJ1O43426 1573 aa31.77■■■□□ 2.68
NUBP2-216ENST00000569898 GRIN2BQ13224 1484 aa31.76■■■□□ 2.67
NUBP2-216ENST00000569898 PBRM1Q86U86 1689 aa31.73■■■□□ 2.67
NUBP2-216ENST00000569898 SYNJ2O15056 1496 aa31.71■■■□□ 2.67
NUBP2-216ENST00000569898 CHMP7Q8WUX9 453 aaPredicted RBP31.68■■■□□ 2.66
NUBP2-216ENST00000569898 TRHP20396 242 aaPredicted RBP31.64■■■□□ 2.66
NUBP2-216ENST00000569898 ABCA5Q8WWZ7 1642 aa31.63■■■□□ 2.65
NUBP2-216ENST00000569898 GAPVD1Q14C86 1478 aa31.61■■■□□ 2.65
NUBP2-216ENST00000569898 ABCA10Q8WWZ4 1543 aa31.59■■■□□ 2.65
NUBP2-216ENST00000569898 ADAMTS12P58397 1594 aa31.4■■■□□ 2.62
NUBP2-216ENST00000569898 GRIN2AQ12879 1464 aa31.39■■■□□ 2.62
NUBP2-216ENST00000569898 BIVM-ERCC5R4GMW8 1640 aa31.38■■■□□ 2.61
NUBP2-216ENST00000569898 SUPT5HO00267 1087 aaKnown RBP31.37■■■□□ 2.61
NUBP2-216ENST00000569898 TOP2BQ02880 1626 aa31.35■■■□□ 2.61
NUBP2-216ENST00000569898 ERCC6L2Q5T890 1561 aa31.35■■■□□ 2.61
NUBP2-216ENST00000569898 WRNQ14191 1432 aaPredicted RBP eCLIP31.35■■■□□ 2.61
NUBP2-216ENST00000569898 CEP170Q5SW79 1584 aa31.34■■■□□ 2.61
NUBP2-216ENST00000569898 NUP160Q12769 1436 aa31.3■■■□□ 2.6
NUBP2-216ENST00000569898 SHROOM2Q13796 1616 aa31.24■■■□□ 2.59
NUBP2-216ENST00000569898 FHAD1B1AJZ9 1412 aa31.2■■■□□ 2.59
NUBP2-216ENST00000569898 ERICH3Q5RHP9 1530 aa31.19■■■□□ 2.58
NUBP2-216ENST00000569898 RUSC2Q8N2Y8 1516 aa30.98■■■□□ 2.55
NUBP2-216ENST00000569898 PRG4Q92954 1404 aaPredicted RBP30.96■■■□□ 2.55
NUBP2-216ENST00000569898 KIF13AQ9H1H9 1805 aa30.95■■■□□ 2.55
NUBP2-216ENST00000569898 AEBP2Q6ZN18 517 aaPredicted RBP30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms