RNA–Protein interactions for RNA: ENST00000422839.5

SMTN-206, Transcript of smoothelin, humanhuman

TSL 4

Gene SMTN, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-206ENST00000422839 NISCHQ9Y2I1 1504 aa34.19■■■■□ 3.06
SMTN-206ENST00000422839 CCDC180Q9P1Z9 1646 aa30.72■■■□□ 2.51
SMTN-206ENST00000422839 ABCC9O60706 1549 aa30.57■■■□□ 2.48
SMTN-206ENST00000422839 RB1CC1Q8TDY2 1594 aa29.23■■■□□ 2.27
SMTN-206ENST00000422839 NACADO15069 1562 aa29.05■■■□□ 2.24
SMTN-206ENST00000422839 DCAF8L2P0C7V8 631 aa28.77■■■□□ 2.2
SMTN-206ENST00000422839 MYO15BQ96JP2 1530 aa28.71■■■□□ 2.19
SMTN-206ENST00000422839 DNAJC5BQ9UF47 199 aa28.53■■■□□ 2.16
SMTN-206ENST00000422839 PABPN1Q86U42 306 aaKnown RBP eCLIP28.42■■■□□ 2.14
SMTN-206ENST00000422839 UNC13AQ9UPW8 1703 aa28.39■■■□□ 2.14
SMTN-206ENST00000422839 ZCCHC6Q5VYS8 1495 aaKnown RBP28.35■■■□□ 2.13
SMTN-206ENST00000422839 DCAF1Q9Y4B6 1507 aa28.33■■■□□ 2.13
SMTN-206ENST00000422839 BICRAQ9NZM4 1560 aa28.24■■■□□ 2.11
SMTN-206ENST00000422839 SHROOM4Q9ULL8 1493 aa28.12■■■□□ 2.09
SMTN-206ENST00000422839 SCRIBQ14160 1630 aa27.89■■■□□ 2.05
SMTN-206ENST00000422839 CC2D2AQ9P2K1 1620 aa27.63■■■□□ 2.01
SMTN-206ENST00000422839 EIF4G1Q04637 1599 aaKnown RBP27.61■■■□□ 2.01
SMTN-206ENST00000422839 CECR2Q9BXF3 1484 aa27.59■■■□□ 2.01
SMTN-206ENST00000422839 NCAPD3P42695 1498 aa26.79■■□□□ 1.88
SMTN-206ENST00000422839 SMARCA2P51531 1590 aa26.68■■□□□ 1.86
SMTN-206ENST00000422839 ATAD2BQ9ULI0 1458 aa26.68■■□□□ 1.86
SMTN-206ENST00000422839 SMARCA4P51532 1647 aa26.65■■□□□ 1.86
SMTN-206ENST00000422839 HMGXB3Q12766 1538 aa26.62■■□□□ 1.85
SMTN-206ENST00000422839 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
SMTN-206ENST00000422839 ERCC6Q03468 1493 aa26.49■■□□□ 1.83
SMTN-206ENST00000422839 CUX2O14529 1486 aa26.47■■□□□ 1.83
SMTN-206ENST00000422839 BAZ1BQ9UIG0 1483 aaKnown RBP26.45■■□□□ 1.82
SMTN-206ENST00000422839 PEG3Q9GZU2 1588 aa26.44■■□□□ 1.82
SMTN-206ENST00000422839 DNAJC5Q9H3Z4 198 aa26.32■■□□□ 1.8
SMTN-206ENST00000422839 MROH2BQ7Z745 1585 aa26.28■■□□□ 1.8
SMTN-206ENST00000422839 NESP48681 1621 aa26.22■■□□□ 1.79
SMTN-206ENST00000422839 LAMC3Q9Y6N6 1575 aa26.2■■□□□ 1.78
SMTN-206ENST00000422839 PDS5BQ9NTI5 1447 aa26.08■■□□□ 1.77
SMTN-206ENST00000422839 THOC2Q8NI27 1593 aaKnown RBP26.02■■□□□ 1.76
SMTN-206ENST00000422839 CADPSQ9ULU8 1353 aa25.97■■□□□ 1.75
SMTN-206ENST00000422839 WIZO95785 1651 aa25.93■■□□□ 1.74
SMTN-206ENST00000422839 KIF21AQ7Z4S6 1674 aa25.9■■□□□ 1.74
SMTN-206ENST00000422839 MRC2Q9UBG0 1479 aa25.8■■□□□ 1.72
SMTN-206ENST00000422839 RSF1Q96T23 1441 aaPredicted RBP25.79■■□□□ 1.72
SMTN-206ENST00000422839 TOP2AP11388 1531 aaKnown RBP25.73■■□□□ 1.71
SMTN-206ENST00000422839 WDR62O43379 1518 aa25.72■■□□□ 1.71
SMTN-206ENST00000422839 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
SMTN-206ENST00000422839 CFTRP13569 1480 aa25.68■■□□□ 1.7
SMTN-206ENST00000422839 FANCD2Q9BXW9 1451 aa25.66■■□□□ 1.7
SMTN-206ENST00000422839 PRDM2Q13029 1718 aa25.4■■□□□ 1.66
SMTN-206ENST00000422839 URB2Q14146 1524 aaKnown RBP25.39■■□□□ 1.66
SMTN-206ENST00000422839 CCDC88BA6NC98 1476 aa25.37■■□□□ 1.65
SMTN-206ENST00000422839 ABCC8Q09428 1581 aa25.23■■□□□ 1.63
SMTN-206ENST00000422839 OSCARQ8IYS5 282 aa25.22■■□□□ 1.63
SMTN-206ENST00000422839 IFT140Q96RY7 1462 aa25.21■■□□□ 1.63
SMTN-206ENST00000422839 TOPBP1Q92547 1522 aa25.17■■□□□ 1.62
SMTN-206ENST00000422839 TRIM41Q8WV44 630 aa25.14■■□□□ 1.62
SMTN-206ENST00000422839 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
SMTN-206ENST00000422839 ZNF608Q9ULD9 1512 aaPredicted RBP25.05■■□□□ 1.6
SMTN-206ENST00000422839 EIF4G3O43432 1585 aaKnown RBP24.97■■□□□ 1.59
SMTN-206ENST00000422839 TARBP1Q13395 1621 aaKnown RBP24.9■■□□□ 1.58
SMTN-206ENST00000422839 POLA1P09884 1462 aaPredicted RBP24.9■■□□□ 1.58
SMTN-206ENST00000422839 AQRO60306 1485 aaKnown RBP eCLIP24.84■■□□□ 1.57
SMTN-206ENST00000422839 WDR97A6NE52 1622 aa24.82■■□□□ 1.56
SMTN-206ENST00000422839 SOGA1O94964 1423 aa24.81■■□□□ 1.56
SMTN-206ENST00000422839 RIMBP3CA6NJZ7 1639 aa24.81■■□□□ 1.56
SMTN-206ENST00000422839 RIMBP3BA6NNM3 1639 aa24.81■■□□□ 1.56
SMTN-206ENST00000422839 RIMBP3Q9UFD9 1639 aa24.81■■□□□ 1.56
SMTN-206ENST00000422839 ARHGEF11O15085 1522 aa24.77■■□□□ 1.56
SMTN-206ENST00000422839 FGD5Q6ZNL6 1462 aa24.75■■□□□ 1.55
SMTN-206ENST00000422839 RAD54L2Q9Y4B4 1467 aa24.75■■□□□ 1.55
SMTN-206ENST00000422839 CHD1O14646 1710 aa24.72■■□□□ 1.55
SMTN-206ENST00000422839 FBLN2P98095 1184 aa24.71■■□□□ 1.55
SMTN-206ENST00000422839 CUX1P39880 1505 aa24.71■■□□□ 1.55
SMTN-206ENST00000422839 TDRD9Q8NDG6 1382 aaKnown RBP24.7■■□□□ 1.55
SMTN-206ENST00000422839 MAGI1Q96QZ7 1491 aaPredicted RBP24.65■■□□□ 1.54
SMTN-206ENST00000422839 GRIN2BQ13224 1484 aa24.64■■□□□ 1.53
SMTN-206ENST00000422839 SNAPC4Q5SXM2 1469 aa24.64■■□□□ 1.53
SMTN-206ENST00000422839 SUPT5HO00267 1087 aaKnown RBP24.62■■□□□ 1.53
SMTN-206ENST00000422839 CHMP7Q8WUX9 453 aaPredicted RBP24.58■■□□□ 1.53
SMTN-206ENST00000422839 SYNJ1O43426 1573 aa24.56■■□□□ 1.52
SMTN-206ENST00000422839 CYB5RLQ6IPT4 315 aa24.56■■□□□ 1.52
SMTN-206ENST00000422839 SYNJ2O15056 1496 aa24.54■■□□□ 1.52
SMTN-206ENST00000422839 GAPVD1Q14C86 1478 aa24.52■■□□□ 1.52
SMTN-206ENST00000422839 ABCA10Q8WWZ4 1543 aa24.52■■□□□ 1.52
SMTN-206ENST00000422839 ARAP1Q96P48 1450 aa24.51■■□□□ 1.51
SMTN-206ENST00000422839 CLASP1Q7Z460 1538 aa24.5■■□□□ 1.51
SMTN-206ENST00000422839 WRNQ14191 1432 aaPredicted RBP eCLIP24.45■■□□□ 1.51
SMTN-206ENST00000422839 PBRM1Q86U86 1689 aa24.45■■□□□ 1.5
SMTN-206ENST00000422839 ABCA5Q8WWZ7 1642 aa24.43■■□□□ 1.5
SMTN-206ENST00000422839 TOP2BQ02880 1626 aa24.37■■□□□ 1.49
SMTN-206ENST00000422839 BIVM-ERCC5R4GMW8 1640 aa24.35■■□□□ 1.49
SMTN-206ENST00000422839 TRHP20396 242 aaPredicted RBP24.31■■□□□ 1.48
SMTN-206ENST00000422839 GRIN2AQ12879 1464 aa24.28■■□□□ 1.48
SMTN-206ENST00000422839 ADAMTS12P58397 1594 aa24.26■■□□□ 1.47
SMTN-206ENST00000422839 FHAD1B1AJZ9 1412 aa24.25■■□□□ 1.47
SMTN-206ENST00000422839 ERICH3Q5RHP9 1530 aa24.24■■□□□ 1.47
SMTN-206ENST00000422839 NUP160Q12769 1436 aa24.21■■□□□ 1.47
SMTN-206ENST00000422839 CEP170Q5SW79 1584 aa24.13■■□□□ 1.45
SMTN-206ENST00000422839 SHROOM2Q13796 1616 aa24.06■■□□□ 1.44
SMTN-206ENST00000422839 ERCC6L2Q5T890 1561 aa24.01■■□□□ 1.43
SMTN-206ENST00000422839 KIF27Q86VH2 1401 aa23.95■■□□□ 1.42
SMTN-206ENST00000422839 PRG4Q92954 1404 aaPredicted RBP23.95■■□□□ 1.42
SMTN-206ENST00000422839 JPH4Q96JJ6 628 aa23.95■■□□□ 1.42
SMTN-206ENST00000422839 RUSC2Q8N2Y8 1516 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms