RNA–Protein interactions for RNA: ENST00000629124.2

STAG1-210, Transcript of stromal antigen 1, humanhuman

TSL 5 BASIC

Gene STAG1, Length 4,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-210ENST00000629124 NISCHQ9Y2I1 1504 aa19.12■□□□□ 0.65
STAG1-210ENST00000629124 DCAF8L2P0C7V8 631 aa18.49■□□□□ 0.55
STAG1-210ENST00000629124 SUPT5HO00267 1087 aaKnown RBP17.14■□□□□ 0.33
STAG1-210ENST00000629124 SHROOM4Q9ULL8 1493 aa17.1■□□□□ 0.33
STAG1-210ENST00000629124 FAM9AQ8IZU1 332 aaPredicted RBP16.49■□□□□ 0.23
STAG1-210ENST00000629124 ABCC9O60706 1549 aa16.46■□□□□ 0.23
STAG1-210ENST00000629124 APLP2Q06481 763 aa16.25■□□□□ 0.19
STAG1-210ENST00000629124 CCDC180Q9P1Z9 1646 aa16.15■□□□□ 0.18
STAG1-210ENST00000629124 TRIM41Q8WV44 630 aa16.14■□□□□ 0.17
STAG1-210ENST00000629124 EHMT2Q96KQ7 1210 aa16.04■□□□□ 0.16
STAG1-210ENST00000629124 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
STAG1-210ENST00000629124 UBTFP17480 764 aaKnown RBP15.84■□□□□ 0.13
STAG1-210ENST00000629124 ZCCHC6Q5VYS8 1495 aaKnown RBP15.83■□□□□ 0.12
STAG1-210ENST00000629124 RB1CC1Q8TDY2 1594 aa15.73■□□□□ 0.11
STAG1-210ENST00000629124 ATP1B4Q9UN42 357 aaPredicted RBP15.69■□□□□ 0.1
STAG1-210ENST00000629124 RANGAP1P46060 587 aaPredicted RBP15.68■□□□□ 0.1
STAG1-210ENST00000629124 NACADO15069 1562 aa15.66■□□□□ 0.1
STAG1-210ENST00000629124 SCRIBQ14160 1630 aa15.64■□□□□ 0.09
STAG1-210ENST00000629124 CHIC1Q5VXU3 224 aa15.47■□□□□ 0.07
STAG1-210ENST00000629124 DCAF1Q9Y4B6 1507 aa15.45■□□□□ 0.06
STAG1-210ENST00000629124 TTBK1Q5TCY1 1321 aaPredicted RBP15.42■□□□□ 0.06
STAG1-210ENST00000629124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.41■□□□□ 0.06
STAG1-210ENST00000629124 HNRNPUL2Q1KMD3 747 aaKnown RBP15.41■□□□□ 0.06
STAG1-210ENST00000629124 ZEB1P37275 1124 aaPredicted RBP15.3■□□□□ 0.04
STAG1-210ENST00000629124 PCGF6Q9BYE7 350 aa15.27■□□□□ 0.04
STAG1-210ENST00000629124 MYT1LQ9UL68 1186 aa15.25■□□□□ 0.03
STAG1-210ENST00000629124 MYO15BQ96JP2 1530 aa15.23■□□□□ 0.03
STAG1-210ENST00000629124 FBLN2P98095 1184 aa15.21■□□□□ 0.03
STAG1-210ENST00000629124 CCER1Q8TC90 406 aaPredicted RBP15.2■□□□□ 0.02
STAG1-210ENST00000629124 CSRNP3Q8WYN3 585 aa15.13■□□□□ 0.01
STAG1-210ENST00000629124 BAZ1BQ9UIG0 1483 aaKnown RBP15.09■□□□□ 0.01
STAG1-210ENST00000629124 BAZ1AQ9NRL2 1556 aaPredicted RBP15.09■□□□□ 0.01
STAG1-210ENST00000629124 LOC105371045A0A1W2PR82 267 aa15.09■□□□□ 0.01
STAG1-210ENST00000629124 TRIM26Q12899 539 aaPredicted RBP15.09■□□□□ 0.01
STAG1-210ENST00000629124 RSF1Q96T23 1441 aaPredicted RBP15.04■□□□□ -0
STAG1-210ENST00000629124 CDK11AQ9UQ88 783 aaPredicted RBP15.01□□□□□ -0.01
STAG1-210ENST00000629124 PELP1Q8IZL8 1130 aaKnown RBP14.99□□□□□ -0.01
STAG1-210ENST00000629124 ITGAEP38570 1179 aa14.98□□□□□ -0.01
STAG1-210ENST00000629124 PPARGC1BQ86YN6 1023 aaKnown RBP14.96□□□□□ -0.01
STAG1-210ENST00000629124 NPM1P06748 294 aaKnown RBP eCLIP14.94□□□□□ -0.02
STAG1-210ENST00000629124 CHMP7Q8WUX9 453 aaPredicted RBP14.88□□□□□ -0.03
STAG1-210ENST00000629124 SMARCA2P51531 1590 aa14.88□□□□□ -0.03
STAG1-210ENST00000629124 FAM50AQ14320 339 aaKnown RBP14.87□□□□□ -0.03
STAG1-210ENST00000629124 ERCC6Q03468 1493 aa14.85□□□□□ -0.03
STAG1-210ENST00000629124 EEA1Q15075 1411 aa14.85□□□□□ -0.03
STAG1-210ENST00000629124 CECR2Q9BXF3 1484 aa14.81□□□□□ -0.04
STAG1-210ENST00000629124 WRNQ14191 1432 aaPredicted RBP eCLIP14.79□□□□□ -0.04
STAG1-210ENST00000629124 P3H3Q8IVL6 736 aa14.79□□□□□ -0.04
STAG1-210ENST00000629124 PDS5BQ9NTI5 1447 aa14.77□□□□□ -0.05
STAG1-210ENST00000629124 KIF27Q86VH2 1401 aa14.73□□□□□ -0.05
STAG1-210ENST00000629124 TRIM52Q96A61 297 aa14.73□□□□□ -0.05
STAG1-210ENST00000629124 CENPBP07199 599 aaPredicted RBP14.69□□□□□ -0.06
STAG1-210ENST00000629124 MROH2BQ7Z745 1585 aa14.65□□□□□ -0.06
STAG1-210ENST00000629124 ESF1Q9H501 851 aaKnown RBP14.65□□□□□ -0.06
STAG1-210ENST00000629124 MYT1Q01538 1121 aa14.65□□□□□ -0.06
STAG1-210ENST00000629124 ARID3CA6NKF2 412 aa14.62□□□□□ -0.07
STAG1-210ENST00000629124 ZNF777Q9ULD5 760 aaPredicted RBP14.61□□□□□ -0.07
STAG1-210ENST00000629124 CADPSQ9ULU8 1353 aa14.59□□□□□ -0.07
STAG1-210ENST00000629124 ATAD2BQ9ULI0 1458 aa14.59□□□□□ -0.07
STAG1-210ENST00000629124 GOLGA3Q08378 1498 aa14.57□□□□□ -0.08
STAG1-210ENST00000629124 POLR3GLQ9BT43 218 aa14.55□□□□□ -0.08
STAG1-210ENST00000629124 ACIN1Q9UKV3 1341 aaKnown RBP14.55□□□□□ -0.08
STAG1-210ENST00000629124 TOP2AP11388 1531 aaKnown RBP14.55□□□□□ -0.08
STAG1-210ENST00000629124 CCDC88BA6NC98 1476 aa14.55□□□□□ -0.08
STAG1-210ENST00000629124 MTUS2Q5JR59 1369 aa14.55□□□□□ -0.08
STAG1-210ENST00000629124 PLEKHD1A6NEE1 506 aa14.54□□□□□ -0.08
STAG1-210ENST00000629124 CLIP1P30622 1438 aa14.54□□□□□ -0.08
STAG1-210ENST00000629124 TSPY4P0CV99 314 aa14.54□□□□□ -0.08
STAG1-210ENST00000629124 TSPY10P0CW01 314 aa14.54□□□□□ -0.08
STAG1-210ENST00000629124 CEP164Q9UPV0 1460 aa14.53□□□□□ -0.08
STAG1-210ENST00000629124 SMARCA4P51532 1647 aa14.5□□□□□ -0.09
STAG1-210ENST00000629124 NEFLP07196 543 aa14.48□□□□□ -0.09
STAG1-210ENST00000629124 CUX2O14529 1486 aa14.47□□□□□ -0.09
STAG1-210ENST00000629124 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
STAG1-210ENST00000629124 CARMIL1Q5VZK9 1371 aa14.46□□□□□ -0.09
STAG1-210ENST00000629124 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
STAG1-210ENST00000629124 SOGA1O94964 1423 aa14.44□□□□□ -0.1
STAG1-210ENST00000629124 TNIKQ9UKE5 1360 aa14.43□□□□□ -0.1
STAG1-210ENST00000629124 NCAPD3P42695 1498 aa14.43□□□□□ -0.1
STAG1-210ENST00000629124 HRCP23327 699 aa14.43□□□□□ -0.1
STAG1-210ENST00000629124 NEUROD1Q13562 356 aa14.42□□□□□ -0.1
STAG1-210ENST00000629124 BCANQ96GW7 911 aa14.41□□□□□ -0.1
STAG1-210ENST00000629124 STAG3Q9UJ98 1225 aa14.39□□□□□ -0.11
STAG1-210ENST00000629124 CARMIL2Q6F5E8 1435 aa14.38□□□□□ -0.11
STAG1-210ENST00000629124 FHAD1B1AJZ9 1412 aa14.38□□□□□ -0.11
STAG1-210ENST00000629124 WIZO95785 1651 aa14.37□□□□□ -0.11
STAG1-210ENST00000629124 EIF4G1Q04637 1599 aaKnown RBP14.36□□□□□ -0.11
STAG1-210ENST00000629124 KCNH8Q96L42 1107 aa14.36□□□□□ -0.11
STAG1-210ENST00000629124 ZNF326Q5BKZ1 582 aaKnown RBP14.35□□□□□ -0.11
STAG1-210ENST00000629124 CEP162Q5TB80 1403 aa14.34□□□□□ -0.11
STAG1-210ENST00000629124 FANCD2Q9BXW9 1451 aa14.32□□□□□ -0.12
STAG1-210ENST00000629124 TDRD9Q8NDG6 1382 aaKnown RBP14.31□□□□□ -0.12
STAG1-210ENST00000629124 CFDP1Q9UEE9 299 aaPredicted RBP14.3□□□□□ -0.12
STAG1-210ENST00000629124 CHGAP10645 457 aaKnown RBP14.27□□□□□ -0.13
STAG1-210ENST00000629124 TONSLQ96HA7 1378 aa14.25□□□□□ -0.13
STAG1-210ENST00000629124 CHIC2Q9UKJ5 165 aa14.24□□□□□ -0.13
STAG1-210ENST00000629124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.23□□□□□ -0.132e-6■■■□□ 16.6
STAG1-210ENST00000629124 YTHDC1Q96MU7 727 aaKnown RBP14.21□□□□□ -0.14
STAG1-210ENST00000629124 FMN1Q68DA7 1419 aa14.2□□□□□ -0.14
STAG1-210ENST00000629124 NEFMP07197 916 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms