Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC25.58■■□□□ 1.69
HFM1A2PYH4 AC002347.1-201ENST00000569543 541 ntBASIC25.58■■□□□ 1.69
HFM1A2PYH4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC25.58■■□□□ 1.69
HFM1A2PYH4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HFM1A2PYH4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HFM1A2PYH4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
HFM1A2PYH4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
HFM1A2PYH4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
HFM1A2PYH4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC25.58■■□□□ 1.69
HFM1A2PYH4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
HFM1A2PYH4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
HFM1A2PYH4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HFM1A2PYH4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC25.57■■□□□ 1.68
HFM1A2PYH4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HFM1A2PYH4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HFM1A2PYH4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
HFM1A2PYH4 AC096734.2-201ENST00000562054 433 ntBASIC25.57■■□□□ 1.68
HFM1A2PYH4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC25.57■■□□□ 1.68
HFM1A2PYH4 AL513190.1-201ENST00000621254 727 ntBASIC25.57■■□□□ 1.68
HFM1A2PYH4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC25.57■■□□□ 1.68
HFM1A2PYH4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
HFM1A2PYH4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HFM1A2PYH4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC25.57■■□□□ 1.68
HFM1A2PYH4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC25.57■■□□□ 1.68
HFM1A2PYH4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HFM1A2PYH4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
HFM1A2PYH4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
HFM1A2PYH4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
HFM1A2PYH4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC25.56■■□□□ 1.68
HFM1A2PYH4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC25.56■■□□□ 1.68
HFM1A2PYH4 PDPK2P-202ENST00000562415 1191 ntBASIC25.56■■□□□ 1.68
HFM1A2PYH4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
HFM1A2PYH4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC25.56■■□□□ 1.68
HFM1A2PYH4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC25.56■■□□□ 1.68
HFM1A2PYH4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC25.56■■□□□ 1.68
HFM1A2PYH4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
HFM1A2PYH4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC25.56■■□□□ 1.68
HFM1A2PYH4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC25.56■■□□□ 1.68
HFM1A2PYH4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
HFM1A2PYH4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
HFM1A2PYH4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
HFM1A2PYH4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
HFM1A2PYH4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC25.56■■□□□ 1.68
HFM1A2PYH4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC25.56■■□□□ 1.68
HFM1A2PYH4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC25.55■■□□□ 1.68
HFM1A2PYH4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
HFM1A2PYH4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
HFM1A2PYH4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
HFM1A2PYH4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
HFM1A2PYH4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC25.55■■□□□ 1.68
HFM1A2PYH4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC25.55■■□□□ 1.68
HFM1A2PYH4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC25.55■■□□□ 1.68
HFM1A2PYH4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC25.55■■□□□ 1.68
HFM1A2PYH4 AC092865.6-201ENST00000642101 219 ntBASIC25.55■■□□□ 1.68
HFM1A2PYH4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
HFM1A2PYH4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC25.55■■□□□ 1.68
HFM1A2PYH4 RHBDF1P1-201ENST00000427504 1941 ntBASIC25.55■■□□□ 1.68
HFM1A2PYH4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
HFM1A2PYH4 FRMD8P1-201ENST00000440433 1524 ntBASIC25.55■■□□□ 1.68
HFM1A2PYH4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC25.55■■□□□ 1.68
HFM1A2PYH4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
HFM1A2PYH4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
HFM1A2PYH4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
HFM1A2PYH4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
HFM1A2PYH4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HFM1A2PYH4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
HFM1A2PYH4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC25.54■■□□□ 1.68
HFM1A2PYH4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC25.54■■□□□ 1.68
HFM1A2PYH4 GPX1P2-201ENST00000429271 606 ntBASIC25.54■■□□□ 1.68
HFM1A2PYH4 CXCL1P1-201ENST00000502804 216 ntBASIC25.54■■□□□ 1.68
HFM1A2PYH4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC25.54■■□□□ 1.68
HFM1A2PYH4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC25.54■■□□□ 1.68
HFM1A2PYH4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC25.54■■□□□ 1.68
HFM1A2PYH4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
HFM1A2PYH4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HFM1A2PYH4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC25.54■■□□□ 1.68
HFM1A2PYH4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HFM1A2PYH4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HFM1A2PYH4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HFM1A2PYH4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC25.54■■□□□ 1.68
HFM1A2PYH4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HFM1A2PYH4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HFM1A2PYH4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
HFM1A2PYH4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC25.54■■□□□ 1.68
HFM1A2PYH4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC25.54■■□□□ 1.68
HFM1A2PYH4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HFM1A2PYH4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
HFM1A2PYH4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HFM1A2PYH4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HFM1A2PYH4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
HFM1A2PYH4 MCCD1P2-201ENST00000423228 335 ntBASIC25.54■■□□□ 1.68
HFM1A2PYH4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC25.54■■□□□ 1.68
HFM1A2PYH4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC25.54■■□□□ 1.68
HFM1A2PYH4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HFM1A2PYH4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC25.54■■□□□ 1.68
HFM1A2PYH4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC25.54■■□□□ 1.68
HFM1A2PYH4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC25.54■■□□□ 1.68
HFM1A2PYH4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
HFM1A2PYH4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC25.53■■□□□ 1.68
HFM1A2PYH4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms