RNA–Protein interactions for RNA: ENST00000336695.4

ROMO1-201, Transcript of reactive oxygen species modulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ROMO1, Length 496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROMO1-201ENST00000336695 NISCHQ9Y2I1 1504 aa42.6■■■■■ 4.41
ROMO1-201ENST00000336695 ABCC9O60706 1549 aa38.41■■■■□ 3.74
ROMO1-201ENST00000336695 CCDC180Q9P1Z9 1646 aa38.27■■■■□ 3.72
ROMO1-201ENST00000336695 RB1CC1Q8TDY2 1594 aa36.53■■■■□ 3.44
ROMO1-201ENST00000336695 NACADO15069 1562 aa36.27■■■■□ 3.4
ROMO1-201ENST00000336695 DNAJC5BQ9UF47 199 aa36.16■■■■□ 3.38
ROMO1-201ENST00000336695 DCAF8L2P0C7V8 631 aa36.06■■■■□ 3.36
ROMO1-201ENST00000336695 PABPN1Q86U42 306 aaKnown RBP eCLIP35.76■■■■□ 3.32
ROMO1-201ENST00000336695 MYO15BQ96JP2 1530 aa35.75■■■■□ 3.31
ROMO1-201ENST00000336695 UNC13AQ9UPW8 1703 aa35.6■■■■□ 3.29
ROMO1-201ENST00000336695 BICRAQ9NZM4 1560 aa35.42■■■■□ 3.26
ROMO1-201ENST00000336695 ZCCHC6Q5VYS8 1495 aaKnown RBP35.27■■■■□ 3.24
ROMO1-201ENST00000336695 DCAF1Q9Y4B6 1507 aa35.22■■■■□ 3.23
ROMO1-201ENST00000336695 SHROOM4Q9ULL8 1493 aa35.03■■■■□ 3.2
ROMO1-201ENST00000336695 SCRIBQ14160 1630 aa34.82■■■■□ 3.16
ROMO1-201ENST00000336695 CC2D2AQ9P2K1 1620 aa34.68■■■■□ 3.14
ROMO1-201ENST00000336695 CECR2Q9BXF3 1484 aa34.65■■■■□ 3.14
ROMO1-201ENST00000336695 EIF4G1Q04637 1599 aaKnown RBP34.59■■■■□ 3.13
ROMO1-201ENST00000336695 NCAPD3P42695 1498 aa33.5■■■□□ 2.95
ROMO1-201ENST00000336695 DNAJC5Q9H3Z4 198 aa33.39■■■□□ 2.94
ROMO1-201ENST00000336695 ATAD2BQ9ULI0 1458 aa33.34■■■□□ 2.93
ROMO1-201ENST00000336695 SMARCA2P51531 1590 aa33.26■■■□□ 2.91
ROMO1-201ENST00000336695 SMARCA4P51532 1647 aa33.24■■■□□ 2.91
ROMO1-201ENST00000336695 CUX2O14529 1486 aa33.23■■■□□ 2.91
ROMO1-201ENST00000336695 ERCC6Q03468 1493 aa33.22■■■□□ 2.91
ROMO1-201ENST00000336695 HMGXB3Q12766 1538 aa33.2■■■□□ 2.91
ROMO1-201ENST00000336695 BAZ1AQ9NRL2 1556 aaPredicted RBP33.09■■■□□ 2.89
ROMO1-201ENST00000336695 BAZ1BQ9UIG0 1483 aaKnown RBP33.01■■■□□ 2.88
ROMO1-201ENST00000336695 PEG3Q9GZU2 1588 aa32.95■■■□□ 2.86
ROMO1-201ENST00000336695 NESP48681 1621 aa32.93■■■□□ 2.86
ROMO1-201ENST00000336695 MROH2BQ7Z745 1585 aa32.79■■■□□ 2.84
ROMO1-201ENST00000336695 LAMC3Q9Y6N6 1575 aa32.74■■■□□ 2.83
ROMO1-201ENST00000336695 THOC2Q8NI27 1593 aaKnown RBP32.62■■■□□ 2.81
ROMO1-201ENST00000336695 PDS5BQ9NTI5 1447 aa32.6■■■□□ 2.81
ROMO1-201ENST00000336695 KIF21AQ7Z4S6 1674 aa32.48■■■□□ 2.79
ROMO1-201ENST00000336695 CADPSQ9ULU8 1353 aa32.47■■■□□ 2.79
ROMO1-201ENST00000336695 WIZO95785 1651 aa32.37■■■□□ 2.77
ROMO1-201ENST00000336695 MRC2Q9UBG0 1479 aa32.28■■■□□ 2.76
ROMO1-201ENST00000336695 WDR62O43379 1518 aa32.19■■■□□ 2.74
ROMO1-201ENST00000336695 CEP164Q9UPV0 1460 aa32.13■■■□□ 2.73
ROMO1-201ENST00000336695 RSF1Q96T23 1441 aaPredicted RBP32.09■■■□□ 2.73
ROMO1-201ENST00000336695 FANCD2Q9BXW9 1451 aa32.07■■■□□ 2.72
ROMO1-201ENST00000336695 CFTRP13569 1480 aa32.05■■■□□ 2.72
ROMO1-201ENST00000336695 TOP2AP11388 1531 aaKnown RBP32■■■□□ 2.71
ROMO1-201ENST00000336695 TRIM41Q8WV44 630 aa31.83■■■□□ 2.69
ROMO1-201ENST00000336695 URB2Q14146 1524 aaKnown RBP31.79■■■□□ 2.68
ROMO1-201ENST00000336695 OSCARQ8IYS5 282 aa31.73■■■□□ 2.67
ROMO1-201ENST00000336695 PRDM2Q13029 1718 aa31.64■■■□□ 2.66
ROMO1-201ENST00000336695 CCDC88BA6NC98 1476 aa31.64■■■□□ 2.66
ROMO1-201ENST00000336695 IFT140Q96RY7 1462 aa31.51■■■□□ 2.63
ROMO1-201ENST00000336695 ABCC8Q09428 1581 aa31.44■■■□□ 2.62
ROMO1-201ENST00000336695 TOPBP1Q92547 1522 aa31.44■■■□□ 2.62
ROMO1-201ENST00000336695 ZNF608Q9ULD9 1512 aaPredicted RBP31.41■■■□□ 2.62
ROMO1-201ENST00000336695 DNMBPQ6XZF7 1577 aa31.3■■■□□ 2.6
ROMO1-201ENST00000336695 RIMBP3CA6NJZ7 1639 aa31.22■■■□□ 2.59
ROMO1-201ENST00000336695 RIMBP3BA6NNM3 1639 aa31.22■■■□□ 2.59
ROMO1-201ENST00000336695 RIMBP3Q9UFD9 1639 aa31.22■■■□□ 2.59
ROMO1-201ENST00000336695 EIF4G3O43432 1585 aaKnown RBP31.22■■■□□ 2.59
ROMO1-201ENST00000336695 TARBP1Q13395 1621 aaKnown RBP31.14■■■□□ 2.58
ROMO1-201ENST00000336695 ARHGEF11O15085 1522 aa31.14■■■□□ 2.57
ROMO1-201ENST00000336695 AQRO60306 1485 aaKnown RBP eCLIP31.13■■■□□ 2.571e-6■■■■■ 32.7
ROMO1-201ENST00000336695 POLA1P09884 1462 aaPredicted RBP31.11■■■□□ 2.57
ROMO1-201ENST00000336695 SOGA1O94964 1423 aa31■■■□□ 2.55
ROMO1-201ENST00000336695 FBLN2P98095 1184 aa31■■■□□ 2.55
ROMO1-201ENST00000336695 CHD1O14646 1710 aa30.98■■■□□ 2.55
ROMO1-201ENST00000336695 RAD54L2Q9Y4B4 1467 aa30.98■■■□□ 2.55
ROMO1-201ENST00000336695 CYB5RLQ6IPT4 315 aa30.96■■■□□ 2.55
ROMO1-201ENST00000336695 TDRD9Q8NDG6 1382 aaKnown RBP30.93■■■□□ 2.54
ROMO1-201ENST00000336695 WDR97A6NE52 1622 aa30.89■■■□□ 2.54
ROMO1-201ENST00000336695 FGD5Q6ZNL6 1462 aa30.89■■■□□ 2.53
ROMO1-201ENST00000336695 CUX1P39880 1505 aa30.82■■■□□ 2.52
ROMO1-201ENST00000336695 SNAPC4Q5SXM2 1469 aa30.81■■■□□ 2.52
ROMO1-201ENST00000336695 ARAP1Q96P48 1450 aa30.8■■■□□ 2.52
ROMO1-201ENST00000336695 CHMP7Q8WUX9 453 aaPredicted RBP30.78■■■□□ 2.52
ROMO1-201ENST00000336695 MAGI1Q96QZ7 1491 aaPredicted RBP30.76■■■□□ 2.52
ROMO1-201ENST00000336695 GRIN2BQ13224 1484 aa30.75■■■□□ 2.51
ROMO1-201ENST00000336695 SYNJ1O43426 1573 aa30.69■■■□□ 2.5
ROMO1-201ENST00000336695 TRHP20396 242 aaPredicted RBP30.68■■■□□ 2.5
ROMO1-201ENST00000336695 CLASP1Q7Z460 1538 aa30.68■■■□□ 2.5
ROMO1-201ENST00000336695 SYNJ2O15056 1496 aa30.65■■■□□ 2.5
ROMO1-201ENST00000336695 GAPVD1Q14C86 1478 aa30.61■■■□□ 2.49
ROMO1-201ENST00000336695 SUPT5HO00267 1087 aaKnown RBP30.58■■■□□ 2.49
ROMO1-201ENST00000336695 ABCA10Q8WWZ4 1543 aa30.55■■■□□ 2.48
ROMO1-201ENST00000336695 PBRM1Q86U86 1689 aa30.53■■■□□ 2.48
ROMO1-201ENST00000336695 ABCA5Q8WWZ7 1642 aa30.47■■■□□ 2.47
ROMO1-201ENST00000336695 WRNQ14191 1432 aaPredicted RBP eCLIP30.43■■■□□ 2.46
ROMO1-201ENST00000336695 GRIN2AQ12879 1464 aa30.33■■■□□ 2.45
ROMO1-201ENST00000336695 TOP2BQ02880 1626 aa30.3■■■□□ 2.44
ROMO1-201ENST00000336695 BIVM-ERCC5R4GMW8 1640 aa30.29■■■□□ 2.44
ROMO1-201ENST00000336695 ADAMTS12P58397 1594 aa30.25■■■□□ 2.43
ROMO1-201ENST00000336695 NUP160Q12769 1436 aa30.24■■■□□ 2.43
ROMO1-201ENST00000336695 FHAD1B1AJZ9 1412 aa30.23■■■□□ 2.43
ROMO1-201ENST00000336695 CEP170Q5SW79 1584 aa30.18■■■□□ 2.42
ROMO1-201ENST00000336695 ERICH3Q5RHP9 1530 aa30.17■■■□□ 2.42
ROMO1-201ENST00000336695 ERCC6L2Q5T890 1561 aa30.14■■■□□ 2.42
ROMO1-201ENST00000336695 SHROOM2Q13796 1616 aa30.08■■■□□ 2.41
ROMO1-201ENST00000336695 JPH4Q96JJ6 628 aa29.98■■■□□ 2.39
ROMO1-201ENST00000336695 PRG4Q92954 1404 aaPredicted RBP29.96■■■□□ 2.39
ROMO1-201ENST00000336695 AEBP2Q6ZN18 517 aaPredicted RBP29.92■■■□□ 2.38
ROMO1-201ENST00000336695 RUSC2Q8N2Y8 1516 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms