RNA–Protein interactions for RNA: ENST00000455890.2

LINC00237-202, long intergenic non-protein coding RNA 237, humanhuman

TSL 2 BASIC

Gene LINC00237, Length 1,220 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00237-202ENST00000455890 NISCHQ9Y2I1 1504 aa41.85■■■■■ 4.29
LINC00237-202ENST00000455890 CCDC180Q9P1Z9 1646 aa37.25■■■■□ 3.55
LINC00237-202ENST00000455890 ABCC9O60706 1549 aa37.16■■■■□ 3.54
LINC00237-202ENST00000455890 DCAF8L2P0C7V8 631 aa35.41■■■■□ 3.26
LINC00237-202ENST00000455890 RB1CC1Q8TDY2 1594 aa35.38■■■■□ 3.25
LINC00237-202ENST00000455890 NACADO15069 1562 aa35.21■■■■□ 3.23
LINC00237-202ENST00000455890 MYO15BQ96JP2 1530 aa34.8■■■■□ 3.16
LINC00237-202ENST00000455890 PABPN1Q86U42 306 aaKnown RBP eCLIP34.77■■■■□ 3.16
LINC00237-202ENST00000455890 ZCCHC6Q5VYS8 1495 aaKnown RBP34.71■■■■□ 3.15
LINC00237-202ENST00000455890 DNAJC5BQ9UF47 199 aa34.69■■■■□ 3.14
LINC00237-202ENST00000455890 UNC13AQ9UPW8 1703 aa34.55■■■■□ 3.12
LINC00237-202ENST00000455890 DCAF1Q9Y4B6 1507 aa34.5■■■■□ 3.11
LINC00237-202ENST00000455890 BICRAQ9NZM4 1560 aa34.39■■■■□ 3.1
LINC00237-202ENST00000455890 SCRIBQ14160 1630 aa34.12■■■■□ 3.05
LINC00237-202ENST00000455890 SHROOM4Q9ULL8 1493 aa33.82■■■■□ 3
LINC00237-202ENST00000455890 CC2D2AQ9P2K1 1620 aa33.5■■■□□ 2.95
LINC00237-202ENST00000455890 EIF4G1Q04637 1599 aaKnown RBP33.5■■■□□ 2.95
LINC00237-202ENST00000455890 CECR2Q9BXF3 1484 aa33.4■■■□□ 2.94
LINC00237-202ENST00000455890 NCAPD3P42695 1498 aa32.57■■■□□ 2.8
LINC00237-202ENST00000455890 ATAD2BQ9ULI0 1458 aa32.54■■■□□ 2.8
LINC00237-202ENST00000455890 SMARCA4P51532 1647 aa32.52■■■□□ 2.8
LINC00237-202ENST00000455890 BAZ1AQ9NRL2 1556 aaPredicted RBP32.41■■■□□ 2.78
LINC00237-202ENST00000455890 SMARCA2P51531 1590 aa32.39■■■□□ 2.78
LINC00237-202ENST00000455890 MROH2BQ7Z745 1585 aa32.29■■■□□ 2.76
LINC00237-202ENST00000455890 HMGXB3Q12766 1538 aa32.27■■■□□ 2.76
LINC00237-202ENST00000455890 BAZ1BQ9UIG0 1483 aaKnown RBP32.22■■■□□ 2.75
LINC00237-202ENST00000455890 PEG3Q9GZU2 1588 aa32.16■■■□□ 2.74
LINC00237-202ENST00000455890 NESP48681 1621 aa32.03■■■□□ 2.72
LINC00237-202ENST00000455890 ERCC6Q03468 1493 aa32.02■■■□□ 2.72
LINC00237-202ENST00000455890 WIZO95785 1651 aa31.89■■■□□ 2.7
LINC00237-202ENST00000455890 CUX2O14529 1486 aa31.77■■■□□ 2.68
LINC00237-202ENST00000455890 RSF1Q96T23 1441 aaPredicted RBP31.76■■■□□ 2.68
LINC00237-202ENST00000455890 LAMC3Q9Y6N6 1575 aa31.71■■■□□ 2.67
LINC00237-202ENST00000455890 CADPSQ9ULU8 1353 aa31.64■■■□□ 2.66
LINC00237-202ENST00000455890 PDS5BQ9NTI5 1447 aa31.59■■■□□ 2.65
LINC00237-202ENST00000455890 DNAJC5Q9H3Z4 198 aa31.53■■■□□ 2.64
LINC00237-202ENST00000455890 KIF21AQ7Z4S6 1674 aa31.49■■■□□ 2.63
LINC00237-202ENST00000455890 THOC2Q8NI27 1593 aaKnown RBP31.49■■■□□ 2.63
LINC00237-202ENST00000455890 TOP2AP11388 1531 aaKnown RBP31.46■■■□□ 2.63
LINC00237-202ENST00000455890 CFTRP13569 1480 aa31.31■■■□□ 2.6
LINC00237-202ENST00000455890 MRC2Q9UBG0 1479 aa31.28■■■□□ 2.6
LINC00237-202ENST00000455890 FANCD2Q9BXW9 1451 aa31.26■■■□□ 2.59
LINC00237-202ENST00000455890 CEP164Q9UPV0 1460 aa31.22■■■□□ 2.59
LINC00237-202ENST00000455890 CCDC88BA6NC98 1476 aa31.2■■■□□ 2.58
LINC00237-202ENST00000455890 WDR62O43379 1518 aa31.15■■■□□ 2.58
LINC00237-202ENST00000455890 URB2Q14146 1524 aaKnown RBP30.98■■■□□ 2.55
LINC00237-202ENST00000455890 PRDM2Q13029 1718 aa30.84■■■□□ 2.53
LINC00237-202ENST00000455890 SUPT5HO00267 1087 aaKnown RBP30.76■■■□□ 2.51
LINC00237-202ENST00000455890 TOPBP1Q92547 1522 aa30.7■■■□□ 2.51
LINC00237-202ENST00000455890 ABCC8Q09428 1581 aa30.59■■■□□ 2.49
LINC00237-202ENST00000455890 ZNF608Q9ULD9 1512 aaPredicted RBP30.59■■■□□ 2.49
LINC00237-202ENST00000455890 IFT140Q96RY7 1462 aa30.59■■■□□ 2.49
LINC00237-202ENST00000455890 DNMBPQ6XZF7 1577 aa30.56■■■□□ 2.48
LINC00237-202ENST00000455890 OSCARQ8IYS5 282 aa30.52■■■□□ 2.48
LINC00237-202ENST00000455890 POLA1P09884 1462 aaPredicted RBP30.41■■■□□ 2.46
LINC00237-202ENST00000455890 AQRO60306 1485 aaKnown RBP eCLIP30.38■■■□□ 2.45
LINC00237-202ENST00000455890 RAD54L2Q9Y4B4 1467 aa30.36■■■□□ 2.45
LINC00237-202ENST00000455890 TARBP1Q13395 1621 aaKnown RBP30.36■■■□□ 2.45
LINC00237-202ENST00000455890 TRIM41Q8WV44 630 aa30.35■■■□□ 2.45
LINC00237-202ENST00000455890 SOGA1O94964 1423 aa30.33■■■□□ 2.45
LINC00237-202ENST00000455890 EIF4G3O43432 1585 aaKnown RBP30.32■■■□□ 2.44
LINC00237-202ENST00000455890 CUX1P39880 1505 aa30.3■■■□□ 2.44
LINC00237-202ENST00000455890 TDRD9Q8NDG6 1382 aaKnown RBP30.28■■■□□ 2.44
LINC00237-202ENST00000455890 FGD5Q6ZNL6 1462 aa30.27■■■□□ 2.44
LINC00237-202ENST00000455890 FBLN2P98095 1184 aa30.19■■■□□ 2.42
LINC00237-202ENST00000455890 CHD1O14646 1710 aa30.02■■■□□ 2.4
LINC00237-202ENST00000455890 SNAPC4Q5SXM2 1469 aa30.01■■■□□ 2.4
LINC00237-202ENST00000455890 RIMBP3CA6NJZ7 1639 aa29.97■■■□□ 2.39
LINC00237-202ENST00000455890 RIMBP3BA6NNM3 1639 aa29.97■■■□□ 2.39
LINC00237-202ENST00000455890 RIMBP3Q9UFD9 1639 aa29.97■■■□□ 2.39
LINC00237-202ENST00000455890 CHMP7Q8WUX9 453 aaPredicted RBP29.97■■■□□ 2.39
LINC00237-202ENST00000455890 GRIN2BQ13224 1484 aa29.97■■■□□ 2.39
LINC00237-202ENST00000455890 WDR97A6NE52 1622 aa29.95■■■□□ 2.38
LINC00237-202ENST00000455890 WRNQ14191 1432 aaPredicted RBP eCLIP29.94■■■□□ 2.38
LINC00237-202ENST00000455890 ARHGEF11O15085 1522 aa29.93■■■□□ 2.38
LINC00237-202ENST00000455890 GAPVD1Q14C86 1478 aa29.93■■■□□ 2.38
LINC00237-202ENST00000455890 ABCA10Q8WWZ4 1543 aa29.91■■■□□ 2.38
LINC00237-202ENST00000455890 MAGI1Q96QZ7 1491 aaPredicted RBP29.89■■■□□ 2.38
LINC00237-202ENST00000455890 SYNJ1O43426 1573 aa29.86■■■□□ 2.37
LINC00237-202ENST00000455890 CYB5RLQ6IPT4 315 aa29.85■■■□□ 2.37
LINC00237-202ENST00000455890 TOP2BQ02880 1626 aa29.84■■■□□ 2.37
LINC00237-202ENST00000455890 SYNJ2O15056 1496 aa29.81■■■□□ 2.36
LINC00237-202ENST00000455890 BIVM-ERCC5R4GMW8 1640 aa29.8■■■□□ 2.36
LINC00237-202ENST00000455890 ABCA5Q8WWZ7 1642 aa29.79■■■□□ 2.36
LINC00237-202ENST00000455890 PBRM1Q86U86 1689 aa29.77■■■□□ 2.36
LINC00237-202ENST00000455890 CLASP1Q7Z460 1538 aa29.71■■■□□ 2.35
LINC00237-202ENST00000455890 ARAP1Q96P48 1450 aa29.68■■■□□ 2.34
LINC00237-202ENST00000455890 GRIN2AQ12879 1464 aa29.57■■■□□ 2.32
LINC00237-202ENST00000455890 ADAMTS12P58397 1594 aa29.56■■■□□ 2.32
LINC00237-202ENST00000455890 FHAD1B1AJZ9 1412 aa29.55■■■□□ 2.32
LINC00237-202ENST00000455890 ERICH3Q5RHP9 1530 aa29.51■■■□□ 2.32
LINC00237-202ENST00000455890 NUP160Q12769 1436 aa29.46■■■□□ 2.31
LINC00237-202ENST00000455890 CEP170Q5SW79 1584 aa29.45■■■□□ 2.31
LINC00237-202ENST00000455890 TRHP20396 242 aaPredicted RBP29.4■■■□□ 2.3
LINC00237-202ENST00000455890 ERCC6L2Q5T890 1561 aa29.36■■■□□ 2.29
LINC00237-202ENST00000455890 IGF1RP08069 1367 aa29.36■■■□□ 2.29
LINC00237-202ENST00000455890 KIF27Q86VH2 1401 aa29.33■■■□□ 2.29
LINC00237-202ENST00000455890 JPH4Q96JJ6 628 aa29.28■■■□□ 2.28
LINC00237-202ENST00000455890 SHROOM2Q13796 1616 aa29.23■■■□□ 2.27
LINC00237-202ENST00000455890 PRG4Q92954 1404 aaPredicted RBP29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms