RNA–Protein interactions for RNA: ENST00000502804.2

CXCL1P1-201, Transcript of C-X-C motif chemokine ligand 1 pseudogene 1, humanhuman

BASIC

Gene CXCL1P1, Length 216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P1-201ENST00000502804 NISCHQ9Y2I1 1504 aa40.91■■■■■ 4.14
CXCL1P1-201ENST00000502804 CCDC180Q9P1Z9 1646 aa36.3■■■■□ 3.4
CXCL1P1-201ENST00000502804 ABCC9O60706 1549 aa35.45■■■■□ 3.27
CXCL1P1-201ENST00000502804 DCAF8L2P0C7V8 631 aa34.21■■■■□ 3.07
CXCL1P1-201ENST00000502804 RB1CC1Q8TDY2 1594 aa34.15■■■■□ 3.06
CXCL1P1-201ENST00000502804 NACADO15069 1562 aa34.13■■■■□ 3.05
CXCL1P1-201ENST00000502804 ZCCHC6Q5VYS8 1495 aaKnown RBP34.09■■■■□ 3.05
CXCL1P1-201ENST00000502804 MYO15BQ96JP2 1530 aa33.95■■■■□ 3.03
CXCL1P1-201ENST00000502804 DCAF1Q9Y4B6 1507 aa33.84■■■■□ 3.01
CXCL1P1-201ENST00000502804 UNC13AQ9UPW8 1703 aa33.31■■■□□ 2.92
CXCL1P1-201ENST00000502804 PABPN1Q86U42 306 aaKnown RBP eCLIP33.16■■■□□ 2.9
CXCL1P1-201ENST00000502804 SCRIBQ14160 1630 aa33.14■■■□□ 2.9
CXCL1P1-201ENST00000502804 BICRAQ9NZM4 1560 aa33.08■■■□□ 2.89
CXCL1P1-201ENST00000502804 SHROOM4Q9ULL8 1493 aa32.76■■■□□ 2.84
CXCL1P1-201ENST00000502804 DNAJC5BQ9UF47 199 aa32.43■■■□□ 2.78
CXCL1P1-201ENST00000502804 EIF4G1Q04637 1599 aaKnown RBP32.21■■■□□ 2.75
CXCL1P1-201ENST00000502804 CC2D2AQ9P2K1 1620 aa32.05■■■□□ 2.72
CXCL1P1-201ENST00000502804 CECR2Q9BXF3 1484 aa31.86■■■□□ 2.69
CXCL1P1-201ENST00000502804 SMARCA4P51532 1647 aa31.71■■■□□ 2.67
CXCL1P1-201ENST00000502804 BAZ1AQ9NRL2 1556 aaPredicted RBP31.71■■■□□ 2.67
CXCL1P1-201ENST00000502804 ATAD2BQ9ULI0 1458 aa31.52■■■□□ 2.64
CXCL1P1-201ENST00000502804 MROH2BQ7Z745 1585 aa31.52■■■□□ 2.64
CXCL1P1-201ENST00000502804 NCAPD3P42695 1498 aa31.5■■■□□ 2.63
CXCL1P1-201ENST00000502804 SMARCA2P51531 1590 aa31.5■■■□□ 2.63
CXCL1P1-201ENST00000502804 PEG3Q9GZU2 1588 aa31.39■■■□□ 2.62
CXCL1P1-201ENST00000502804 HMGXB3Q12766 1538 aa31.34■■■□□ 2.61
CXCL1P1-201ENST00000502804 BAZ1BQ9UIG0 1483 aaKnown RBP31.28■■■□□ 2.6
CXCL1P1-201ENST00000502804 RSF1Q96T23 1441 aaPredicted RBP31.22■■■□□ 2.59
CXCL1P1-201ENST00000502804 WIZO95785 1651 aa31.19■■■□□ 2.58
CXCL1P1-201ENST00000502804 TOP2AP11388 1531 aaKnown RBP30.88■■■□□ 2.53
CXCL1P1-201ENST00000502804 NESP48681 1621 aa30.69■■■□□ 2.5
CXCL1P1-201ENST00000502804 LAMC3Q9Y6N6 1575 aa30.64■■■□□ 2.5
CXCL1P1-201ENST00000502804 CADPSQ9ULU8 1353 aa30.6■■■□□ 2.49
CXCL1P1-201ENST00000502804 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
CXCL1P1-201ENST00000502804 SUPT5HO00267 1087 aaKnown RBP30.56■■■□□ 2.48
CXCL1P1-201ENST00000502804 CCDC88BA6NC98 1476 aa30.52■■■□□ 2.48
CXCL1P1-201ENST00000502804 PDS5BQ9NTI5 1447 aa30.46■■■□□ 2.47
CXCL1P1-201ENST00000502804 CFTRP13569 1480 aa30.43■■■□□ 2.46
CXCL1P1-201ENST00000502804 KIF21AQ7Z4S6 1674 aa30.31■■■□□ 2.44
CXCL1P1-201ENST00000502804 FANCD2Q9BXW9 1451 aa30.24■■■□□ 2.43
CXCL1P1-201ENST00000502804 CEP164Q9UPV0 1460 aa30.19■■■□□ 2.42
CXCL1P1-201ENST00000502804 THOC2Q8NI27 1593 aaKnown RBP30.19■■■□□ 2.42
CXCL1P1-201ENST00000502804 CUX2O14529 1486 aa30.19■■■□□ 2.42
CXCL1P1-201ENST00000502804 PRDM2Q13029 1718 aa30.16■■■□□ 2.42
CXCL1P1-201ENST00000502804 MRC2Q9UBG0 1479 aa30.12■■■□□ 2.41
CXCL1P1-201ENST00000502804 WDR62O43379 1518 aa30.01■■■□□ 2.39
CXCL1P1-201ENST00000502804 URB2Q14146 1524 aaKnown RBP29.91■■■□□ 2.38
CXCL1P1-201ENST00000502804 ABCC8Q09428 1581 aa29.78■■■□□ 2.36
CXCL1P1-201ENST00000502804 TOPBP1Q92547 1522 aa29.76■■■□□ 2.35
CXCL1P1-201ENST00000502804 DNMBPQ6XZF7 1577 aa29.73■■■□□ 2.35
CXCL1P1-201ENST00000502804 CUX1P39880 1505 aa29.56■■■□□ 2.32
CXCL1P1-201ENST00000502804 IFT140Q96RY7 1462 aa29.56■■■□□ 2.32
CXCL1P1-201ENST00000502804 POLA1P09884 1462 aaPredicted RBP29.51■■■□□ 2.31
CXCL1P1-201ENST00000502804 FGD5Q6ZNL6 1462 aa29.47■■■□□ 2.31
CXCL1P1-201ENST00000502804 WRNQ14191 1432 aaPredicted RBP eCLIP29.45■■■□□ 2.3
CXCL1P1-201ENST00000502804 SOGA1O94964 1423 aa29.42■■■□□ 2.3
CXCL1P1-201ENST00000502804 TARBP1Q13395 1621 aaKnown RBP29.41■■■□□ 2.3
CXCL1P1-201ENST00000502804 ZNF608Q9ULD9 1512 aaPredicted RBP29.4■■■□□ 2.3
CXCL1P1-201ENST00000502804 RAD54L2Q9Y4B4 1467 aa29.39■■■□□ 2.3
CXCL1P1-201ENST00000502804 TOP2BQ02880 1626 aa29.34■■■□□ 2.29
CXCL1P1-201ENST00000502804 SYNJ1O43426 1573 aa29.34■■■□□ 2.29
CXCL1P1-201ENST00000502804 BIVM-ERCC5R4GMW8 1640 aa29.33■■■□□ 2.29
CXCL1P1-201ENST00000502804 EIF4G3O43432 1585 aaKnown RBP29.28■■■□□ 2.28
CXCL1P1-201ENST00000502804 AQRO60306 1485 aaKnown RBP eCLIP29.26■■■□□ 2.27
CXCL1P1-201ENST00000502804 TDRD9Q8NDG6 1382 aaKnown RBP29.24■■■□□ 2.27
CXCL1P1-201ENST00000502804 WDR97A6NE52 1622 aa29.2■■■□□ 2.26
CXCL1P1-201ENST00000502804 ABCA10Q8WWZ4 1543 aa29.18■■■□□ 2.26
CXCL1P1-201ENST00000502804 DNAJC5Q9H3Z4 198 aa29.14■■■□□ 2.26
CXCL1P1-201ENST00000502804 GAPVD1Q14C86 1478 aa29.07■■■□□ 2.24
CXCL1P1-201ENST00000502804 GRIN2BQ13224 1484 aa29.05■■■□□ 2.24
CXCL1P1-201ENST00000502804 ABCA5Q8WWZ7 1642 aa29.04■■■□□ 2.24
CXCL1P1-201ENST00000502804 SNAPC4Q5SXM2 1469 aa28.99■■■□□ 2.23
CXCL1P1-201ENST00000502804 OSCARQ8IYS5 282 aa28.99■■■□□ 2.23
CXCL1P1-201ENST00000502804 PBRM1Q86U86 1689 aa28.96■■■□□ 2.23
CXCL1P1-201ENST00000502804 MAGI1Q96QZ7 1491 aaPredicted RBP28.96■■■□□ 2.23
CXCL1P1-201ENST00000502804 FBLN2P98095 1184 aa28.93■■■□□ 2.22
CXCL1P1-201ENST00000502804 CHD1O14646 1710 aa28.87■■■□□ 2.21
CXCL1P1-201ENST00000502804 CHMP7Q8WUX9 453 aaPredicted RBP28.87■■■□□ 2.21
CXCL1P1-201ENST00000502804 TRIM41Q8WV44 630 aa28.86■■■□□ 2.21
CXCL1P1-201ENST00000502804 SYNJ2O15056 1496 aa28.85■■■□□ 2.21
CXCL1P1-201ENST00000502804 KIF27Q86VH2 1401 aa28.84■■■□□ 2.21
CXCL1P1-201ENST00000502804 ERICH3Q5RHP9 1530 aa28.84■■■□□ 2.21
CXCL1P1-201ENST00000502804 ADAMTS12P58397 1594 aa28.75■■■□□ 2.19
CXCL1P1-201ENST00000502804 FHAD1B1AJZ9 1412 aa28.75■■■□□ 2.19
CXCL1P1-201ENST00000502804 IGF1RP08069 1367 aa28.69■■■□□ 2.18
CXCL1P1-201ENST00000502804 GRIN2AQ12879 1464 aa28.67■■■□□ 2.18
CXCL1P1-201ENST00000502804 CUL7Q14999 1698 aa28.59■■■□□ 2.17
CXCL1P1-201ENST00000502804 CLASP1Q7Z460 1538 aa28.58■■■□□ 2.17
CXCL1P1-201ENST00000502804 RUSC2Q8N2Y8 1516 aa28.58■■■□□ 2.17
CXCL1P1-201ENST00000502804 CHIC1Q5VXU3 224 aa28.56■■■□□ 2.16
CXCL1P1-201ENST00000502804 NUP160Q12769 1436 aa28.53■■■□□ 2.16
CXCL1P1-201ENST00000502804 CARMIL1Q5VZK9 1371 aa28.53■■■□□ 2.16
CXCL1P1-201ENST00000502804 CEP170Q5SW79 1584 aa28.5■■■□□ 2.15
CXCL1P1-201ENST00000502804 ARHGEF11O15085 1522 aa28.48■■■□□ 2.15
CXCL1P1-201ENST00000502804 RIMBP3CA6NJZ7 1639 aa28.46■■■□□ 2.15
CXCL1P1-201ENST00000502804 RIMBP3BA6NNM3 1639 aa28.46■■■□□ 2.15
CXCL1P1-201ENST00000502804 RIMBP3Q9UFD9 1639 aa28.46■■■□□ 2.15
CXCL1P1-201ENST00000502804 RAPGEF2Q9Y4G8 1499 aa28.37■■■□□ 2.13
CXCL1P1-201ENST00000502804 EEA1Q15075 1411 aa28.35■■■□□ 2.13
CXCL1P1-201ENST00000502804 CSRNP3Q8WYN3 585 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms