RNA–Protein interactions for RNA: ENST00000396870.8

ZNF200-202, Transcript of zinc finger protein 200, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF200, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF200-202ENST00000396870 NISCHQ9Y2I1 1504 aa37.85■■■■□ 3.65
ZNF200-202ENST00000396870 CCDC180Q9P1Z9 1646 aa32.48■■■□□ 2.79
ZNF200-202ENST00000396870 ZCCHC6Q5VYS8 1495 aaKnown RBP31.94■■■□□ 2.7
ZNF200-202ENST00000396870 SHROOM4Q9ULL8 1493 aa31.66■■■□□ 2.66
ZNF200-202ENST00000396870 DCAF8L2P0C7V8 631 aa31.22■■■□□ 2.59
ZNF200-202ENST00000396870 DCAF1Q9Y4B6 1507 aa31.18■■■□□ 2.58
ZNF200-202ENST00000396870 SUPT5HO00267 1087 aaKnown RBP30.86■■■□□ 2.53
ZNF200-202ENST00000396870 MYO15BQ96JP2 1530 aa30.48■■■□□ 2.47
ZNF200-202ENST00000396870 ABCC9O60706 1549 aa30.24■■■□□ 2.43
ZNF200-202ENST00000396870 SCRIBQ14160 1630 aa30.17■■■□□ 2.42
ZNF200-202ENST00000396870 NACADO15069 1562 aa30.11■■■□□ 2.41
ZNF200-202ENST00000396870 HRCP23327 699 aa30.04■■■□□ 2.4
ZNF200-202ENST00000396870 CHIC1Q5VXU3 224 aa29.93■■■□□ 2.38
ZNF200-202ENST00000396870 RSF1Q96T23 1441 aaPredicted RBP29.75■■■□□ 2.35
ZNF200-202ENST00000396870 RB1CC1Q8TDY2 1594 aa29.66■■■□□ 2.34
ZNF200-202ENST00000396870 PCGF6Q9BYE7 350 aa29.56■■■□□ 2.32
ZNF200-202ENST00000396870 CECR2Q9BXF3 1484 aa29.47■■■□□ 2.31
ZNF200-202ENST00000396870 MROH2BQ7Z745 1585 aa29.35■■■□□ 2.29
ZNF200-202ENST00000396870 PPARGC1BQ86YN6 1023 aaKnown RBP29.29■■■□□ 2.28
ZNF200-202ENST00000396870 UNC13AQ9UPW8 1703 aa29.22■■■□□ 2.27
ZNF200-202ENST00000396870 WIZO95785 1651 aa29.15■■■□□ 2.26
ZNF200-202ENST00000396870 BAZ1AQ9NRL2 1556 aaPredicted RBP29.11■■■□□ 2.25
ZNF200-202ENST00000396870 LOC105371045A0A1W2PR82 267 aa29.04■■■□□ 2.24
ZNF200-202ENST00000396870 SMARCA4P51532 1647 aa28.91■■■□□ 2.22
ZNF200-202ENST00000396870 BICRAQ9NZM4 1560 aa28.88■■■□□ 2.21
ZNF200-202ENST00000396870 TRIM26Q12899 539 aaPredicted RBP28.88■■■□□ 2.21
ZNF200-202ENST00000396870 TRIM41Q8WV44 630 aa28.87■■■□□ 2.21
ZNF200-202ENST00000396870 PABPN1Q86U42 306 aaKnown RBP eCLIP28.77■■■□□ 2.2
ZNF200-202ENST00000396870 TOP2AP11388 1531 aaKnown RBP28.75■■■□□ 2.19
ZNF200-202ENST00000396870 EIF4G1Q04637 1599 aaKnown RBP28.65■■■□□ 2.18
ZNF200-202ENST00000396870 CCDC88BA6NC98 1476 aa28.58■■■□□ 2.17
ZNF200-202ENST00000396870 SMARCA2P51531 1590 aa28.57■■■□□ 2.16
ZNF200-202ENST00000396870 ZEB1P37275 1124 aaPredicted RBP28.5■■■□□ 2.15
ZNF200-202ENST00000396870 FAM9AQ8IZU1 332 aaPredicted RBP28.48■■■□□ 2.15
ZNF200-202ENST00000396870 PEG3Q9GZU2 1588 aa28.48■■■□□ 2.15
ZNF200-202ENST00000396870 ABCC8Q09428 1581 aa28.29■■■□□ 2.12
ZNF200-202ENST00000396870 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
ZNF200-202ENST00000396870 PELP1Q8IZL8 1130 aaKnown RBP28.16■■■□□ 2.1
ZNF200-202ENST00000396870 EHMT2Q96KQ7 1210 aa28.14■■■□□ 2.09
ZNF200-202ENST00000396870 BAZ1BQ9UIG0 1483 aaKnown RBP28.13■■■□□ 2.09
ZNF200-202ENST00000396870 SCAF1Q9H7N4 1312 aaKnown RBP28.06■■■□□ 2.08
ZNF200-202ENST00000396870 SOGA1O94964 1423 aa27.95■■■□□ 2.06
ZNF200-202ENST00000396870 WRNQ14191 1432 aaPredicted RBP eCLIP27.93■■■□□ 2.06
ZNF200-202ENST00000396870 NCAPD3P42695 1498 aa27.86■■■□□ 2.05
ZNF200-202ENST00000396870 EEA1Q15075 1411 aa27.85■■■□□ 2.05
ZNF200-202ENST00000396870 RUSC2Q8N2Y8 1516 aa27.82■■■□□ 2.04
ZNF200-202ENST00000396870 HMGXB3Q12766 1538 aa27.82■■■□□ 2.04
ZNF200-202ENST00000396870 SYNJ1O43426 1573 aa27.81■■■□□ 2.04
ZNF200-202ENST00000396870 CSRNP3Q8WYN3 585 aa27.78■■■□□ 2.04
ZNF200-202ENST00000396870 TNIKQ9UKE5 1360 aa27.67■■■□□ 2.02
ZNF200-202ENST00000396870 CEP162Q5TB80 1403 aa27.62■■■□□ 2.01
ZNF200-202ENST00000396870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.59■■■□□ 2.01
ZNF200-202ENST00000396870 ACIN1Q9UKV3 1341 aaKnown RBP27.57■■■□□ 2
ZNF200-202ENST00000396870 TOP2BQ02880 1626 aa27.57■■■□□ 2
ZNF200-202ENST00000396870 GOLGA3Q08378 1498 aa27.56■■■□□ 2
ZNF200-202ENST00000396870 UBTFP17480 764 aaKnown RBP27.52■■■□□ 2
ZNF200-202ENST00000396870 CCER1Q8TC90 406 aaPredicted RBP27.52■■■□□ 2
ZNF200-202ENST00000396870 BIVM-ERCC5R4GMW8 1640 aa27.49■■□□□ 1.99
ZNF200-202ENST00000396870 CFTRP13569 1480 aa27.49■■□□□ 1.99
ZNF200-202ENST00000396870 KIF21BO75037 1637 aa27.48■■□□□ 1.99
ZNF200-202ENST00000396870 CEP164Q9UPV0 1460 aa27.48■■□□□ 1.99
ZNF200-202ENST00000396870 NEUROD1Q13562 356 aa27.48■■□□□ 1.99
ZNF200-202ENST00000396870 CUX1P39880 1505 aa27.37■■□□□ 1.97
ZNF200-202ENST00000396870 DIEXFQ68CQ4 756 aaKnown RBP27.36■■□□□ 1.97
ZNF200-202ENST00000396870 CC2D2AQ9P2K1 1620 aa27.32■■□□□ 1.96
ZNF200-202ENST00000396870 RAPGEF2Q9Y4G8 1499 aa27.31■■□□□ 1.96
ZNF200-202ENST00000396870 PRDM2Q13029 1718 aa27.27■■□□□ 1.96
ZNF200-202ENST00000396870 CENPBP07199 599 aaPredicted RBP27.25■■□□□ 1.95
ZNF200-202ENST00000396870 GTF3C3Q9Y5Q9 886 aa27.24■■□□□ 1.95
ZNF200-202ENST00000396870 CADPSQ9ULU8 1353 aa27.23■■□□□ 1.95
ZNF200-202ENST00000396870 CLIP1P30622 1438 aa27.21■■□□□ 1.95
ZNF200-202ENST00000396870 PRXQ9BXM0 1461 aa27.17■■□□□ 1.94
ZNF200-202ENST00000396870 ERICH3Q5RHP9 1530 aa27.14■■□□□ 1.93
ZNF200-202ENST00000396870 TTBK1Q5TCY1 1321 aaPredicted RBP27.13■■□□□ 1.93
ZNF200-202ENST00000396870 KIF27Q86VH2 1401 aa27.12■■□□□ 1.93
ZNF200-202ENST00000396870 VPS8Q8N3P4 1428 aa27.06■■□□□ 1.92
ZNF200-202ENST00000396870 ZNF316A6NFI3 1004 aaPredicted RBP27.01■■□□□ 1.91
ZNF200-202ENST00000396870 RANGAP1P46060 587 aaPredicted RBP26.95■■□□□ 1.91
ZNF200-202ENST00000396870 FANCD2Q9BXW9 1451 aa26.94■■□□□ 1.9
ZNF200-202ENST00000396870 FGD5Q6ZNL6 1462 aa26.92■■□□□ 1.9
ZNF200-202ENST00000396870 CUX2O14529 1486 aa26.91■■□□□ 1.9
ZNF200-202ENST00000396870 MYT1Q01538 1121 aa26.91■■□□□ 1.9
ZNF200-202ENST00000396870 IGF1RP08069 1367 aa26.88■■□□□ 1.89
ZNF200-202ENST00000396870 ARAP1Q96P48 1450 aa26.85■■□□□ 1.89
ZNF200-202ENST00000396870 NESP48681 1621 aa26.84■■□□□ 1.89
ZNF200-202ENST00000396870 APLP2Q06481 763 aa26.82■■□□□ 1.88
ZNF200-202ENST00000396870 DNMBPQ6XZF7 1577 aa26.78■■□□□ 1.88
ZNF200-202ENST00000396870 TOPBP1Q92547 1522 aa26.74■■□□□ 1.87
ZNF200-202ENST00000396870 CARMIL1Q5VZK9 1371 aa26.73■■□□□ 1.87
ZNF200-202ENST00000396870 LAMC3Q9Y6N6 1575 aa26.72■■□□□ 1.87
ZNF200-202ENST00000396870 MIER1Q8N108 512 aa26.71■■□□□ 1.87
ZNF200-202ENST00000396870 ARHGAP35Q9NRY4 1499 aa26.71■■□□□ 1.87
ZNF200-202ENST00000396870 YTHDC1Q96MU7 727 aaKnown RBP26.69■■□□□ 1.86
ZNF200-202ENST00000396870 POLA1P09884 1462 aaPredicted RBP26.69■■□□□ 1.86
ZNF200-202ENST00000396870 RAD54L2Q9Y4B4 1467 aa26.67■■□□□ 1.86
ZNF200-202ENST00000396870 ABCA10Q8WWZ4 1543 aa26.67■■□□□ 1.86
ZNF200-202ENST00000396870 DNAJC5BQ9UF47 199 aa26.65■■□□□ 1.86
ZNF200-202ENST00000396870 HNRNPUL2Q1KMD3 747 aaKnown RBP26.61■■□□□ 1.85
ZNF200-202ENST00000396870 URB2Q14146 1524 aaKnown RBP26.58■■□□□ 1.85
ZNF200-202ENST00000396870 KANK4Q5T7N3 995 aaPredicted RBP26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms