RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 NISCHQ9Y2I1 1504 aa39.77■■■■□ 3.96
LYSMD4-210ENST00000545021 CCDC180Q9P1Z9 1646 aa35.69■■■■□ 3.3
LYSMD4-210ENST00000545021 ABCC9O60706 1549 aa34.5■■■■□ 3.11
LYSMD4-210ENST00000545021 RB1CC1Q8TDY2 1594 aa33.48■■■□□ 2.95
LYSMD4-210ENST00000545021 NACADO15069 1562 aa33.48■■■□□ 2.95
LYSMD4-210ENST00000545021 MYO15BQ96JP2 1530 aa33.41■■■□□ 2.94
LYSMD4-210ENST00000545021 DCAF1Q9Y4B6 1507 aa33.17■■■□□ 2.9
LYSMD4-210ENST00000545021 ZCCHC6Q5VYS8 1495 aaKnown RBP33.15■■■□□ 2.9
LYSMD4-210ENST00000545021 UNC13AQ9UPW8 1703 aa32.69■■■□□ 2.82
LYSMD4-210ENST00000545021 HRCP23327 699 aa32.69■■■□□ 2.82
LYSMD4-210ENST00000545021 DCAF8L2P0C7V8 631 aa32.6■■■□□ 2.81
LYSMD4-210ENST00000545021 PELP1Q8IZL8 1130 aaKnown RBP32.46■■■□□ 2.79
LYSMD4-210ENST00000545021 BICRAQ9NZM4 1560 aa32.42■■■□□ 2.78
LYSMD4-210ENST00000545021 SHROOM4Q9ULL8 1493 aa32.42■■■□□ 2.78
LYSMD4-210ENST00000545021 SCRIBQ14160 1630 aa32.14■■■□□ 2.74
LYSMD4-210ENST00000545021 PABPN1Q86U42 306 aaKnown RBP eCLIP32.03■■■□□ 2.72
LYSMD4-210ENST00000545021 PPARGC1BQ86YN6 1023 aaKnown RBP31.69■■■□□ 2.66
LYSMD4-210ENST00000545021 DNAJC5BQ9UF47 199 aa31.67■■■□□ 2.66
LYSMD4-210ENST00000545021 PCGF6Q9BYE7 350 aa31.56■■■□□ 2.64
LYSMD4-210ENST00000545021 EIF4G1Q04637 1599 aaKnown RBP31.53■■■□□ 2.64
LYSMD4-210ENST00000545021 MYT1Q01538 1121 aa31.43■■■□□ 2.62
LYSMD4-210ENST00000545021 CC2D2AQ9P2K1 1620 aa31.4■■■□□ 2.62
LYSMD4-210ENST00000545021 CECR2Q9BXF3 1484 aa31.14■■■□□ 2.58
LYSMD4-210ENST00000545021 SCAF1Q9H7N4 1312 aaKnown RBP31.08■■■□□ 2.57
LYSMD4-210ENST00000545021 SUPT5HO00267 1087 aaKnown RBP31.07■■■□□ 2.56
LYSMD4-210ENST00000545021 CHIC1Q5VXU3 224 aa30.98■■■□□ 2.55
LYSMD4-210ENST00000545021 SMARCA4P51532 1647 aa30.92■■■□□ 2.54
LYSMD4-210ENST00000545021 BAZ1AQ9NRL2 1556 aaPredicted RBP30.88■■■□□ 2.53
LYSMD4-210ENST00000545021 NCAPD3P42695 1498 aa30.81■■■□□ 2.52
LYSMD4-210ENST00000545021 SMARCA2P51531 1590 aa30.79■■■□□ 2.52
LYSMD4-210ENST00000545021 PEG3Q9GZU2 1588 aa30.78■■■□□ 2.52
LYSMD4-210ENST00000545021 HMGXB3Q12766 1538 aa30.74■■■□□ 2.51
LYSMD4-210ENST00000545021 ATAD2BQ9ULI0 1458 aa30.71■■■□□ 2.51
LYSMD4-210ENST00000545021 ZEB1P37275 1124 aaPredicted RBP30.68■■■□□ 2.5
LYSMD4-210ENST00000545021 TRIM26Q12899 539 aaPredicted RBP30.63■■■□□ 2.49
LYSMD4-210ENST00000545021 MROH2BQ7Z745 1585 aa30.53■■■□□ 2.48
LYSMD4-210ENST00000545021 BAZ1BQ9UIG0 1483 aaKnown RBP30.41■■■□□ 2.46
LYSMD4-210ENST00000545021 ACIN1Q9UKV3 1341 aaKnown RBP30.26■■■□□ 2.43
LYSMD4-210ENST00000545021 WIZO95785 1651 aa30.18■■■□□ 2.42
LYSMD4-210ENST00000545021 RSF1Q96T23 1441 aaPredicted RBP30.14■■■□□ 2.41
LYSMD4-210ENST00000545021 LOC105371045A0A1W2PR82 267 aa30.11■■■□□ 2.41
LYSMD4-210ENST00000545021 LAMC3Q9Y6N6 1575 aa30.06■■■□□ 2.4
LYSMD4-210ENST00000545021 NEUROD1Q13562 356 aa30.04■■■□□ 2.4
LYSMD4-210ENST00000545021 TOP2AP11388 1531 aaKnown RBP30.04■■■□□ 2.4
LYSMD4-210ENST00000545021 GTF3C3Q9Y5Q9 886 aa29.92■■■□□ 2.38
LYSMD4-210ENST00000545021 CENPBP07199 599 aaPredicted RBP29.84■■■□□ 2.37
LYSMD4-210ENST00000545021 CUX2O14529 1486 aa29.84■■■□□ 2.37
LYSMD4-210ENST00000545021 NESP48681 1621 aa29.83■■■□□ 2.37
LYSMD4-210ENST00000545021 ERCC6Q03468 1493 aa29.8■■■□□ 2.36
LYSMD4-210ENST00000545021 CADPSQ9ULU8 1353 aa29.78■■■□□ 2.36
LYSMD4-210ENST00000545021 PDS5BQ9NTI5 1447 aa29.74■■■□□ 2.35
LYSMD4-210ENST00000545021 THOC2Q8NI27 1593 aaKnown RBP29.7■■■□□ 2.35
LYSMD4-210ENST00000545021 TTBK1Q5TCY1 1321 aaPredicted RBP29.69■■■□□ 2.34
LYSMD4-210ENST00000545021 KIF21AQ7Z4S6 1674 aa29.66■■■□□ 2.34
LYSMD4-210ENST00000545021 CFTRP13569 1480 aa29.65■■■□□ 2.34
LYSMD4-210ENST00000545021 PRDM2Q13029 1718 aa29.64■■■□□ 2.34
LYSMD4-210ENST00000545021 CCDC88BA6NC98 1476 aa29.51■■■□□ 2.31
LYSMD4-210ENST00000545021 MRC2Q9UBG0 1479 aa29.48■■■□□ 2.31
LYSMD4-210ENST00000545021 WDR62O43379 1518 aa29.47■■■□□ 2.31
LYSMD4-210ENST00000545021 CEP164Q9UPV0 1460 aa29.44■■■□□ 2.3
LYSMD4-210ENST00000545021 FANCD2Q9BXW9 1451 aa29.42■■■□□ 2.3
LYSMD4-210ENST00000545021 DIEXFQ68CQ4 756 aaKnown RBP29.42■■■□□ 2.3
LYSMD4-210ENST00000545021 URB2Q14146 1524 aaKnown RBP29.15■■■□□ 2.26
LYSMD4-210ENST00000545021 ABCC8Q09428 1581 aa29.13■■■□□ 2.25
LYSMD4-210ENST00000545021 CCER1Q8TC90 406 aaPredicted RBP29.1■■■□□ 2.25
LYSMD4-210ENST00000545021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.06■■■□□ 2.24
LYSMD4-210ENST00000545021 TRIM41Q8WV44 630 aa29.05■■■□□ 2.24
LYSMD4-210ENST00000545021 DNMBPQ6XZF7 1577 aa29.04■■■□□ 2.24
LYSMD4-210ENST00000545021 BCL11AQ9H165 835 aa29.02■■■□□ 2.24
LYSMD4-210ENST00000545021 TOPBP1Q92547 1522 aa28.98■■■□□ 2.23
LYSMD4-210ENST00000545021 IFT140Q96RY7 1462 aa28.91■■■□□ 2.22
LYSMD4-210ENST00000545021 ANP32EQ9BTT0 268 aa28.82■■■□□ 2.2
LYSMD4-210ENST00000545021 DNAJC5Q9H3Z4 198 aa28.8■■■□□ 2.2
LYSMD4-210ENST00000545021 WDR97A6NE52 1622 aa28.8■■■□□ 2.2
LYSMD4-210ENST00000545021 ZNF316A6NFI3 1004 aaPredicted RBP28.8■■■□□ 2.2
LYSMD4-210ENST00000545021 YTHDC1Q96MU7 727 aaKnown RBP28.77■■■□□ 2.2
LYSMD4-210ENST00000545021 TARBP1Q13395 1621 aaKnown RBP28.76■■■□□ 2.19
LYSMD4-210ENST00000545021 FAM9AQ8IZU1 332 aaPredicted RBP28.75■■■□□ 2.19
LYSMD4-210ENST00000545021 CLSPNQ9HAW4 1339 aa28.7■■■□□ 2.18
LYSMD4-210ENST00000545021 CUX1P39880 1505 aa28.69■■■□□ 2.18
LYSMD4-210ENST00000545021 POLA1P09884 1462 aaPredicted RBP28.68■■■□□ 2.18
LYSMD4-210ENST00000545021 EIF4G3O43432 1585 aaKnown RBP28.61■■■□□ 2.17
LYSMD4-210ENST00000545021 BIVM-ERCC5R4GMW8 1640 aa28.59■■■□□ 2.17
LYSMD4-210ENST00000545021 FGD5Q6ZNL6 1462 aa28.58■■■□□ 2.17
LYSMD4-210ENST00000545021 ZNF608Q9ULD9 1512 aaPredicted RBP28.57■■■□□ 2.16
LYSMD4-210ENST00000545021 MIER1Q8N108 512 aa28.57■■■□□ 2.16
LYSMD4-210ENST00000545021 TOP2BQ02880 1626 aa28.51■■■□□ 2.16
LYSMD4-210ENST00000545021 SOGA1O94964 1423 aa28.5■■■□□ 2.15
LYSMD4-210ENST00000545021 TSHZ2Q9NRE2 1034 aa28.45■■■□□ 2.15
LYSMD4-210ENST00000545021 SUPT16HQ9Y5B9 1047 aaKnown RBP28.44■■■□□ 2.14
LYSMD4-210ENST00000545021 RAD54L2Q9Y4B4 1467 aa28.43■■■□□ 2.14
LYSMD4-210ENST00000545021 ABCA10Q8WWZ4 1543 aa28.43■■■□□ 2.14
LYSMD4-210ENST00000545021 WRNQ14191 1432 aaPredicted RBP eCLIP28.4■■■□□ 2.14
LYSMD4-210ENST00000545021 CSRNP3Q8WYN3 585 aa28.4■■■□□ 2.14
LYSMD4-210ENST00000545021 SYNJ1O43426 1573 aa28.38■■■□□ 2.13
LYSMD4-210ENST00000545021 ABCA5Q8WWZ7 1642 aa28.37■■■□□ 2.13
LYSMD4-210ENST00000545021 EHMT2Q96KQ7 1210 aa28.35■■■□□ 2.13
LYSMD4-210ENST00000545021 AQRO60306 1485 aaKnown RBP eCLIP28.34■■■□□ 2.13
LYSMD4-210ENST00000545021 MAGI1Q96QZ7 1491 aaPredicted RBP28.32■■■□□ 2.12
LYSMD4-210ENST00000545021 PBRM1Q86U86 1689 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms