RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 NISCHQ9Y2I1 1504 aa39.17■■■■□ 3.86
TMCO1-207ENST00000580248 CCDC180Q9P1Z9 1646 aa34.42■■■■□ 3.1
TMCO1-207ENST00000580248 ABCC9O60706 1549 aa32.96■■■□□ 2.87
TMCO1-207ENST00000580248 ZCCHC6Q5VYS8 1495 aaKnown RBP32.79■■■□□ 2.84
TMCO1-207ENST00000580248 DCAF8L2P0C7V8 631 aa32.47■■■□□ 2.79
TMCO1-207ENST00000580248 DCAF1Q9Y4B6 1507 aa32.43■■■□□ 2.78
TMCO1-207ENST00000580248 MYO15BQ96JP2 1530 aa32.26■■■□□ 2.76
TMCO1-207ENST00000580248 NACADO15069 1562 aa32.2■■■□□ 2.74
TMCO1-207ENST00000580248 RB1CC1Q8TDY2 1594 aa32.03■■■□□ 2.72
TMCO1-207ENST00000580248 SCRIBQ14160 1630 aa31.51■■■□□ 2.63
TMCO1-207ENST00000580248 SHROOM4Q9ULL8 1493 aa31.49■■■□□ 2.63
TMCO1-207ENST00000580248 UNC13AQ9UPW8 1703 aa31.31■■■□□ 2.6
TMCO1-207ENST00000580248 BICRAQ9NZM4 1560 aa31.05■■■□□ 2.56
TMCO1-207ENST00000580248 PABPN1Q86U42 306 aaKnown RBP eCLIP30.98■■■□□ 2.55
TMCO1-207ENST00000580248 SUPT5HO00267 1087 aaKnown RBP30.59■■■□□ 2.49
TMCO1-207ENST00000580248 CECR2Q9BXF3 1484 aa30.44■■■□□ 2.46
TMCO1-207ENST00000580248 BAZ1AQ9NRL2 1556 aaPredicted RBP30.29■■■□□ 2.44
TMCO1-207ENST00000580248 MROH2BQ7Z745 1585 aa30.22■■■□□ 2.43
TMCO1-207ENST00000580248 SMARCA4P51532 1647 aa30.21■■■□□ 2.43
TMCO1-207ENST00000580248 RSF1Q96T23 1441 aaPredicted RBP30.17■■■□□ 2.42
TMCO1-207ENST00000580248 EIF4G1Q04637 1599 aaKnown RBP30.16■■■□□ 2.42
TMCO1-207ENST00000580248 WIZO95785 1651 aa29.93■■■□□ 2.38
TMCO1-207ENST00000580248 PEG3Q9GZU2 1588 aa29.9■■■□□ 2.38
TMCO1-207ENST00000580248 ATAD2BQ9ULI0 1458 aa29.86■■■□□ 2.37
TMCO1-207ENST00000580248 SMARCA2P51531 1590 aa29.85■■■□□ 2.37
TMCO1-207ENST00000580248 CC2D2AQ9P2K1 1620 aa29.84■■■□□ 2.37
TMCO1-207ENST00000580248 NCAPD3P42695 1498 aa29.72■■■□□ 2.35
TMCO1-207ENST00000580248 CHIC1Q5VXU3 224 aa29.65■■■□□ 2.34
TMCO1-207ENST00000580248 BAZ1BQ9UIG0 1483 aaKnown RBP29.65■■■□□ 2.34
TMCO1-207ENST00000580248 TOP2AP11388 1531 aaKnown RBP29.64■■■□□ 2.34
TMCO1-207ENST00000580248 HMGXB3Q12766 1538 aa29.62■■■□□ 2.33
TMCO1-207ENST00000580248 DNAJC5BQ9UF47 199 aa29.56■■■□□ 2.32
TMCO1-207ENST00000580248 CCDC88BA6NC98 1476 aa29.32■■■□□ 2.28
TMCO1-207ENST00000580248 CADPSQ9ULU8 1353 aa28.91■■■□□ 2.22
TMCO1-207ENST00000580248 CFTRP13569 1480 aa28.9■■■□□ 2.22
TMCO1-207ENST00000580248 LAMC3Q9Y6N6 1575 aa28.79■■■□□ 2.2
TMCO1-207ENST00000580248 TRIM41Q8WV44 630 aa28.77■■■□□ 2.2
TMCO1-207ENST00000580248 NESP48681 1621 aa28.76■■■□□ 2.2
TMCO1-207ENST00000580248 PRDM2Q13029 1718 aa28.69■■■□□ 2.18
TMCO1-207ENST00000580248 PDS5BQ9NTI5 1447 aa28.58■■■□□ 2.17
TMCO1-207ENST00000580248 FANCD2Q9BXW9 1451 aa28.57■■■□□ 2.16
TMCO1-207ENST00000580248 LOC105371045A0A1W2PR82 267 aa28.5■■■□□ 2.15
TMCO1-207ENST00000580248 ABCC8Q09428 1581 aa28.49■■■□□ 2.15
TMCO1-207ENST00000580248 CEP164Q9UPV0 1460 aa28.44■■■□□ 2.14
TMCO1-207ENST00000580248 WRNQ14191 1432 aaPredicted RBP eCLIP28.42■■■□□ 2.14
TMCO1-207ENST00000580248 KIF21AQ7Z4S6 1674 aa28.41■■■□□ 2.14
TMCO1-207ENST00000580248 ERCC6Q03468 1493 aa28.34■■■□□ 2.13
TMCO1-207ENST00000580248 SYNJ1O43426 1573 aa28.3■■■□□ 2.12
TMCO1-207ENST00000580248 CUX1P39880 1505 aa28.29■■■□□ 2.12
TMCO1-207ENST00000580248 TOP2BQ02880 1626 aa28.25■■■□□ 2.11
TMCO1-207ENST00000580248 URB2Q14146 1524 aaKnown RBP28.23■■■□□ 2.11
TMCO1-207ENST00000580248 MRC2Q9UBG0 1479 aa28.23■■■□□ 2.11
TMCO1-207ENST00000580248 BIVM-ERCC5R4GMW8 1640 aa28.23■■■□□ 2.11
TMCO1-207ENST00000580248 DNMBPQ6XZF7 1577 aa28.22■■■□□ 2.11
TMCO1-207ENST00000580248 TOPBP1Q92547 1522 aa28.2■■■□□ 2.1
TMCO1-207ENST00000580248 FAM9AQ8IZU1 332 aaPredicted RBP28.18■■■□□ 2.1
TMCO1-207ENST00000580248 THOC2Q8NI27 1593 aaKnown RBP28.12■■■□□ 2.09
TMCO1-207ENST00000580248 WDR62O43379 1518 aa28.1■■■□□ 2.09
TMCO1-207ENST00000580248 FGD5Q6ZNL6 1462 aa28.07■■■□□ 2.08
TMCO1-207ENST00000580248 EEA1Q15075 1411 aa28.03■■■□□ 2.08
TMCO1-207ENST00000580248 POLA1P09884 1462 aaPredicted RBP28.02■■■□□ 2.08
TMCO1-207ENST00000580248 SOGA1O94964 1423 aa27.93■■■□□ 2.06
TMCO1-207ENST00000580248 PCGF6Q9BYE7 350 aa27.9■■■□□ 2.06
TMCO1-207ENST00000580248 RAD54L2Q9Y4B4 1467 aa27.9■■■□□ 2.06
TMCO1-207ENST00000580248 CUX2O14529 1486 aa27.88■■■□□ 2.05
TMCO1-207ENST00000580248 ABCA10Q8WWZ4 1543 aa27.83■■■□□ 2.05
TMCO1-207ENST00000580248 TRIM26Q12899 539 aaPredicted RBP27.82■■■□□ 2.04
TMCO1-207ENST00000580248 TARBP1Q13395 1621 aaKnown RBP27.82■■■□□ 2.04
TMCO1-207ENST00000580248 IFT140Q96RY7 1462 aa27.81■■■□□ 2.04
TMCO1-207ENST00000580248 RUSC2Q8N2Y8 1516 aa27.78■■■□□ 2.04
TMCO1-207ENST00000580248 KIF27Q86VH2 1401 aa27.76■■■□□ 2.03
TMCO1-207ENST00000580248 CSRNP3Q8WYN3 585 aa27.76■■■□□ 2.03
TMCO1-207ENST00000580248 WDR97A6NE52 1622 aa27.76■■■□□ 2.03
TMCO1-207ENST00000580248 EHMT2Q96KQ7 1210 aa27.71■■■□□ 2.03
TMCO1-207ENST00000580248 TDRD9Q8NDG6 1382 aaKnown RBP27.68■■■□□ 2.02
TMCO1-207ENST00000580248 TNIKQ9UKE5 1360 aa27.68■■■□□ 2.02
TMCO1-207ENST00000580248 HRCP23327 699 aa27.67■■■□□ 2.02
TMCO1-207ENST00000580248 ABCA5Q8WWZ7 1642 aa27.63■■■□□ 2.01
TMCO1-207ENST00000580248 ZNF608Q9ULD9 1512 aaPredicted RBP27.63■■■□□ 2.01
TMCO1-207ENST00000580248 GOLGA3Q08378 1498 aa27.63■■■□□ 2.01
TMCO1-207ENST00000580248 GAPVD1Q14C86 1478 aa27.61■■■□□ 2.01
TMCO1-207ENST00000580248 AQRO60306 1485 aaKnown RBP eCLIP27.6■■■□□ 2.011e-7■■■■■ 30.4
TMCO1-207ENST00000580248 KIF21BO75037 1637 aa27.6■■■□□ 2.01
TMCO1-207ENST00000580248 IGF1RP08069 1367 aa27.57■■■□□ 2
TMCO1-207ENST00000580248 EIF4G3O43432 1585 aaKnown RBP27.54■■■□□ 2
TMCO1-207ENST00000580248 CEP162Q5TB80 1403 aa27.52■■■□□ 2
TMCO1-207ENST00000580248 ERICH3Q5RHP9 1530 aa27.51■■□□□ 1.99
TMCO1-207ENST00000580248 GRIN2BQ13224 1484 aa27.49■■□□□ 1.99
TMCO1-207ENST00000580248 PBRM1Q86U86 1689 aa27.47■■□□□ 1.99
TMCO1-207ENST00000580248 UBTFP17480 764 aaKnown RBP27.44■■□□□ 1.98
TMCO1-207ENST00000580248 PRXQ9BXM0 1461 aa27.43■■□□□ 1.98
TMCO1-207ENST00000580248 CARMIL1Q5VZK9 1371 aa27.42■■□□□ 1.98
TMCO1-207ENST00000580248 CUL7Q14999 1698 aa27.4■■□□□ 1.98
TMCO1-207ENST00000580248 SNAPC4Q5SXM2 1469 aa27.34■■□□□ 1.97
TMCO1-207ENST00000580248 RAPGEF2Q9Y4G8 1499 aa27.33■■□□□ 1.97
TMCO1-207ENST00000580248 MAGI1Q96QZ7 1491 aaPredicted RBP27.32■■□□□ 1.96
TMCO1-207ENST00000580248 FHAD1B1AJZ9 1412 aa27.32■■□□□ 1.96
TMCO1-207ENST00000580248 ADAMTS12P58397 1594 aa27.3■■□□□ 1.96
TMCO1-207ENST00000580248 SYNJ2O15056 1496 aa27.21■■□□□ 1.95
TMCO1-207ENST00000580248 CLIP1P30622 1438 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms