RNA–Protein interactions for RNA: ENST00000579647.1

CBX3P2-201, Transcript of chromobox 3 pseudogene 2, humanhuman

TSL 2 BASIC

Gene CBX3P2, Length 1,429 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P2-201ENST00000579647 NISCHQ9Y2I1 1504 aa40.95■■■■■ 4.15
CBX3P2-201ENST00000579647 CCDC180Q9P1Z9 1646 aa36.26■■■■□ 3.4
CBX3P2-201ENST00000579647 ABCC9O60706 1549 aa35.52■■■■□ 3.28
CBX3P2-201ENST00000579647 DCAF8L2P0C7V8 631 aa34.37■■■■□ 3.09
CBX3P2-201ENST00000579647 RB1CC1Q8TDY2 1594 aa34.13■■■■□ 3.05
CBX3P2-201ENST00000579647 NACADO15069 1562 aa34.11■■■■□ 3.05
CBX3P2-201ENST00000579647 ZCCHC6Q5VYS8 1495 aaKnown RBP34.1■■■■□ 3.05
CBX3P2-201ENST00000579647 MYO15BQ96JP2 1530 aa33.89■■■■□ 3.02
CBX3P2-201ENST00000579647 DCAF1Q9Y4B6 1507 aa33.81■■■■□ 3
CBX3P2-201ENST00000579647 UNC13AQ9UPW8 1703 aa33.35■■■□□ 2.93
CBX3P2-201ENST00000579647 PABPN1Q86U42 306 aaKnown RBP eCLIP33.28■■■□□ 2.92
CBX3P2-201ENST00000579647 SCRIBQ14160 1630 aa33.2■■■□□ 2.91
CBX3P2-201ENST00000579647 BICRAQ9NZM4 1560 aa33.11■■■□□ 2.89
CBX3P2-201ENST00000579647 SHROOM4Q9ULL8 1493 aa32.66■■■□□ 2.82
CBX3P2-201ENST00000579647 DNAJC5BQ9UF47 199 aa32.55■■■□□ 2.8
CBX3P2-201ENST00000579647 EIF4G1Q04637 1599 aaKnown RBP32.22■■■□□ 2.75
CBX3P2-201ENST00000579647 CC2D2AQ9P2K1 1620 aa32.08■■■□□ 2.73
CBX3P2-201ENST00000579647 CECR2Q9BXF3 1484 aa31.94■■■□□ 2.7
CBX3P2-201ENST00000579647 SMARCA4P51532 1647 aa31.72■■■□□ 2.67
CBX3P2-201ENST00000579647 BAZ1AQ9NRL2 1556 aaPredicted RBP31.7■■■□□ 2.67
CBX3P2-201ENST00000579647 MROH2BQ7Z745 1585 aa31.59■■■□□ 2.65
CBX3P2-201ENST00000579647 ATAD2BQ9ULI0 1458 aa31.56■■■□□ 2.64
CBX3P2-201ENST00000579647 NCAPD3P42695 1498 aa31.5■■■□□ 2.63
CBX3P2-201ENST00000579647 SMARCA2P51531 1590 aa31.48■■■□□ 2.63
CBX3P2-201ENST00000579647 PEG3Q9GZU2 1588 aa31.36■■■□□ 2.61
CBX3P2-201ENST00000579647 HMGXB3Q12766 1538 aa31.31■■■□□ 2.6
CBX3P2-201ENST00000579647 BAZ1BQ9UIG0 1483 aaKnown RBP31.3■■■□□ 2.6
CBX3P2-201ENST00000579647 RSF1Q96T23 1441 aaPredicted RBP31.29■■■□□ 2.6
CBX3P2-201ENST00000579647 WIZO95785 1651 aa31.26■■■□□ 2.59
CBX3P2-201ENST00000579647 TOP2AP11388 1531 aaKnown RBP30.88■■■□□ 2.53
CBX3P2-201ENST00000579647 NESP48681 1621 aa30.77■■■□□ 2.52
CBX3P2-201ENST00000579647 SUPT5HO00267 1087 aaKnown RBP30.73■■■□□ 2.51
CBX3P2-201ENST00000579647 CADPSQ9ULU8 1353 aa30.63■■■□□ 2.49
CBX3P2-201ENST00000579647 LAMC3Q9Y6N6 1575 aa30.62■■■□□ 2.49
CBX3P2-201ENST00000579647 CCDC88BA6NC98 1476 aa30.58■■■□□ 2.49
CBX3P2-201ENST00000579647 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
CBX3P2-201ENST00000579647 PDS5BQ9NTI5 1447 aa30.45■■■□□ 2.47
CBX3P2-201ENST00000579647 CFTRP13569 1480 aa30.44■■■□□ 2.46
CBX3P2-201ENST00000579647 KIF21AQ7Z4S6 1674 aa30.35■■■□□ 2.45
CBX3P2-201ENST00000579647 FANCD2Q9BXW9 1451 aa30.26■■■□□ 2.44
CBX3P2-201ENST00000579647 CEP164Q9UPV0 1460 aa30.2■■■□□ 2.43
CBX3P2-201ENST00000579647 THOC2Q8NI27 1593 aaKnown RBP30.18■■■□□ 2.42
CBX3P2-201ENST00000579647 CUX2O14529 1486 aa30.14■■■□□ 2.42
CBX3P2-201ENST00000579647 PRDM2Q13029 1718 aa30.14■■■□□ 2.41
CBX3P2-201ENST00000579647 MRC2Q9UBG0 1479 aa30.12■■■□□ 2.41
CBX3P2-201ENST00000579647 WDR62O43379 1518 aa29.99■■■□□ 2.39
CBX3P2-201ENST00000579647 URB2Q14146 1524 aaKnown RBP29.95■■■□□ 2.39
CBX3P2-201ENST00000579647 TOPBP1Q92547 1522 aa29.79■■■□□ 2.36
CBX3P2-201ENST00000579647 ABCC8Q09428 1581 aa29.76■■■□□ 2.35
CBX3P2-201ENST00000579647 DNMBPQ6XZF7 1577 aa29.73■■■□□ 2.35
CBX3P2-201ENST00000579647 CUX1P39880 1505 aa29.62■■■□□ 2.33
CBX3P2-201ENST00000579647 IFT140Q96RY7 1462 aa29.55■■■□□ 2.32
CBX3P2-201ENST00000579647 POLA1P09884 1462 aaPredicted RBP29.54■■■□□ 2.32
CBX3P2-201ENST00000579647 FGD5Q6ZNL6 1462 aa29.5■■■□□ 2.31
CBX3P2-201ENST00000579647 WRNQ14191 1432 aaPredicted RBP eCLIP29.48■■■□□ 2.31
CBX3P2-201ENST00000579647 SOGA1O94964 1423 aa29.47■■■□□ 2.31
CBX3P2-201ENST00000579647 RAD54L2Q9Y4B4 1467 aa29.47■■■□□ 2.31
CBX3P2-201ENST00000579647 ZNF608Q9ULD9 1512 aaPredicted RBP29.46■■■□□ 2.31
CBX3P2-201ENST00000579647 TARBP1Q13395 1621 aaKnown RBP29.43■■■□□ 2.3
CBX3P2-201ENST00000579647 SYNJ1O43426 1573 aa29.39■■■□□ 2.29
CBX3P2-201ENST00000579647 TOP2BQ02880 1626 aa29.36■■■□□ 2.29
CBX3P2-201ENST00000579647 BIVM-ERCC5R4GMW8 1640 aa29.34■■■□□ 2.29
CBX3P2-201ENST00000579647 AQRO60306 1485 aaKnown RBP eCLIP29.34■■■□□ 2.29
CBX3P2-201ENST00000579647 TDRD9Q8NDG6 1382 aaKnown RBP29.32■■■□□ 2.28
CBX3P2-201ENST00000579647 EIF4G3O43432 1585 aaKnown RBP29.28■■■□□ 2.28
CBX3P2-201ENST00000579647 ABCA10Q8WWZ4 1543 aa29.19■■■□□ 2.26
CBX3P2-201ENST00000579647 WDR97A6NE52 1622 aa29.18■■■□□ 2.26
CBX3P2-201ENST00000579647 DNAJC5Q9H3Z4 198 aa29.17■■■□□ 2.26
CBX3P2-201ENST00000579647 GAPVD1Q14C86 1478 aa29.1■■■□□ 2.25
CBX3P2-201ENST00000579647 GRIN2BQ13224 1484 aa29.07■■■□□ 2.24
CBX3P2-201ENST00000579647 ABCA5Q8WWZ7 1642 aa29.04■■■□□ 2.24
CBX3P2-201ENST00000579647 FBLN2P98095 1184 aa29.03■■■□□ 2.24
CBX3P2-201ENST00000579647 OSCARQ8IYS5 282 aa29.03■■■□□ 2.24
CBX3P2-201ENST00000579647 SNAPC4Q5SXM2 1469 aa29.03■■■□□ 2.24
CBX3P2-201ENST00000579647 PBRM1Q86U86 1689 aa28.98■■■□□ 2.23
CBX3P2-201ENST00000579647 TRIM41Q8WV44 630 aa28.97■■■□□ 2.23
CBX3P2-201ENST00000579647 MAGI1Q96QZ7 1491 aaPredicted RBP28.94■■■□□ 2.22
CBX3P2-201ENST00000579647 CHMP7Q8WUX9 453 aaPredicted RBP28.93■■■□□ 2.22
CBX3P2-201ENST00000579647 CHD1O14646 1710 aa28.91■■■□□ 2.22
CBX3P2-201ENST00000579647 KIF27Q86VH2 1401 aa28.85■■■□□ 2.21
CBX3P2-201ENST00000579647 SYNJ2O15056 1496 aa28.85■■■□□ 2.21
CBX3P2-201ENST00000579647 ERICH3Q5RHP9 1530 aa28.83■■■□□ 2.21
CBX3P2-201ENST00000579647 IGF1RP08069 1367 aa28.76■■■□□ 2.19
CBX3P2-201ENST00000579647 FHAD1B1AJZ9 1412 aa28.76■■■□□ 2.19
CBX3P2-201ENST00000579647 ADAMTS12P58397 1594 aa28.76■■■□□ 2.19
CBX3P2-201ENST00000579647 CHIC1Q5VXU3 224 aa28.7■■■□□ 2.19
CBX3P2-201ENST00000579647 RUSC2Q8N2Y8 1516 aa28.7■■■□□ 2.19
CBX3P2-201ENST00000579647 GRIN2AQ12879 1464 aa28.68■■■□□ 2.18
CBX3P2-201ENST00000579647 CARMIL1Q5VZK9 1371 aa28.6■■■□□ 2.17
CBX3P2-201ENST00000579647 CUL7Q14999 1698 aa28.57■■■□□ 2.16
CBX3P2-201ENST00000579647 CLASP1Q7Z460 1538 aa28.57■■■□□ 2.16
CBX3P2-201ENST00000579647 NUP160Q12769 1436 aa28.54■■■□□ 2.16
CBX3P2-201ENST00000579647 CEP170Q5SW79 1584 aa28.53■■■□□ 2.16
CBX3P2-201ENST00000579647 ARHGEF11O15085 1522 aa28.49■■■□□ 2.15
CBX3P2-201ENST00000579647 RIMBP3CA6NJZ7 1639 aa28.48■■■□□ 2.15
CBX3P2-201ENST00000579647 RIMBP3BA6NNM3 1639 aa28.48■■■□□ 2.15
CBX3P2-201ENST00000579647 RIMBP3Q9UFD9 1639 aa28.48■■■□□ 2.15
CBX3P2-201ENST00000579647 FAM9AQ8IZU1 332 aaPredicted RBP28.43■■■□□ 2.14
CBX3P2-201ENST00000579647 CSRNP3Q8WYN3 585 aa28.42■■■□□ 2.14
CBX3P2-201ENST00000579647 RAPGEF2Q9Y4G8 1499 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms