RNA–Protein interactions for RNA: ENST00000395936.5

PMP22-202, Transcript of peripheral myelin protein 22, humanhuman

TSL 3 BASIC

Gene PMP22, Length 816 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-202ENST00000395936 NISCHQ9Y2I1 1504 aa42.26■■■■■ 4.36
PMP22-202ENST00000395936 CCDC180Q9P1Z9 1646 aa37.86■■■■□ 3.65
PMP22-202ENST00000395936 ABCC9O60706 1549 aa37.75■■■■□ 3.63
PMP22-202ENST00000395936 RB1CC1Q8TDY2 1594 aa36■■■■□ 3.35
PMP22-202ENST00000395936 NACADO15069 1562 aa35.81■■■■□ 3.32
PMP22-202ENST00000395936 DCAF8L2P0C7V8 631 aa35.63■■■■□ 3.29
PMP22-202ENST00000395936 MYO15BQ96JP2 1530 aa35.37■■■■□ 3.25
PMP22-202ENST00000395936 DNAJC5BQ9UF47 199 aa35.36■■■■□ 3.25
PMP22-202ENST00000395936 PABPN1Q86U42 306 aaKnown RBP eCLIP35.18■■■■□ 3.22
PMP22-202ENST00000395936 UNC13AQ9UPW8 1703 aa35.15■■■■□ 3.22
PMP22-202ENST00000395936 ZCCHC6Q5VYS8 1495 aaKnown RBP35.03■■■■□ 3.2
PMP22-202ENST00000395936 DCAF1Q9Y4B6 1507 aa34.95■■■■□ 3.19
PMP22-202ENST00000395936 BICRAQ9NZM4 1560 aa34.94■■■■□ 3.18
PMP22-202ENST00000395936 SHROOM4Q9ULL8 1493 aa34.52■■■■□ 3.12
PMP22-202ENST00000395936 SCRIBQ14160 1630 aa34.46■■■■□ 3.11
PMP22-202ENST00000395936 CC2D2AQ9P2K1 1620 aa34.12■■■■□ 3.05
PMP22-202ENST00000395936 EIF4G1Q04637 1599 aaKnown RBP34.07■■■■□ 3.05
PMP22-202ENST00000395936 CECR2Q9BXF3 1484 aa34.01■■■■□ 3.03
PMP22-202ENST00000395936 NCAPD3P42695 1498 aa33.07■■■□□ 2.88
PMP22-202ENST00000395936 ATAD2BQ9ULI0 1458 aa32.96■■■□□ 2.87
PMP22-202ENST00000395936 SMARCA4P51532 1647 aa32.91■■■□□ 2.86
PMP22-202ENST00000395936 SMARCA2P51531 1590 aa32.87■■■□□ 2.85
PMP22-202ENST00000395936 HMGXB3Q12766 1538 aa32.8■■■□□ 2.84
PMP22-202ENST00000395936 BAZ1AQ9NRL2 1556 aaPredicted RBP32.79■■■□□ 2.84
PMP22-202ENST00000395936 PEG3Q9GZU2 1588 aa32.64■■■□□ 2.82
PMP22-202ENST00000395936 BAZ1BQ9UIG0 1483 aaKnown RBP32.62■■■□□ 2.81
PMP22-202ENST00000395936 ERCC6Q03468 1493 aa32.59■■■□□ 2.81
PMP22-202ENST00000395936 MROH2BQ7Z745 1585 aa32.54■■■□□ 2.8
PMP22-202ENST00000395936 CUX2O14529 1486 aa32.53■■■□□ 2.8
PMP22-202ENST00000395936 NESP48681 1621 aa32.44■■■□□ 2.78
PMP22-202ENST00000395936 DNAJC5Q9H3Z4 198 aa32.43■■■□□ 2.78
PMP22-202ENST00000395936 LAMC3Q9Y6N6 1575 aa32.28■■■□□ 2.76
PMP22-202ENST00000395936 WIZO95785 1651 aa32.15■■■□□ 2.74
PMP22-202ENST00000395936 PDS5BQ9NTI5 1447 aa32.11■■■□□ 2.73
PMP22-202ENST00000395936 THOC2Q8NI27 1593 aaKnown RBP32.1■■■□□ 2.73
PMP22-202ENST00000395936 CADPSQ9ULU8 1353 aa32.07■■■□□ 2.72
PMP22-202ENST00000395936 KIF21AQ7Z4S6 1674 aa32.02■■■□□ 2.72
PMP22-202ENST00000395936 RSF1Q96T23 1441 aaPredicted RBP31.93■■■□□ 2.7
PMP22-202ENST00000395936 MRC2Q9UBG0 1479 aa31.79■■■□□ 2.68
PMP22-202ENST00000395936 TOP2AP11388 1531 aaKnown RBP31.75■■■□□ 2.67
PMP22-202ENST00000395936 CFTRP13569 1480 aa31.72■■■□□ 2.67
PMP22-202ENST00000395936 WDR62O43379 1518 aa31.71■■■□□ 2.67
PMP22-202ENST00000395936 CEP164Q9UPV0 1460 aa31.68■■■□□ 2.66
PMP22-202ENST00000395936 FANCD2Q9BXW9 1451 aa31.67■■■□□ 2.66
PMP22-202ENST00000395936 CCDC88BA6NC98 1476 aa31.42■■■□□ 2.62
PMP22-202ENST00000395936 URB2Q14146 1524 aaKnown RBP31.39■■■□□ 2.61
PMP22-202ENST00000395936 PRDM2Q13029 1718 aa31.35■■■□□ 2.61
PMP22-202ENST00000395936 OSCARQ8IYS5 282 aa31.1■■■□□ 2.57
PMP22-202ENST00000395936 TOPBP1Q92547 1522 aa31.08■■■□□ 2.57
PMP22-202ENST00000395936 ABCC8Q09428 1581 aa31.07■■■□□ 2.56
PMP22-202ENST00000395936 IFT140Q96RY7 1462 aa31.07■■■□□ 2.56
PMP22-202ENST00000395936 TRIM41Q8WV44 630 aa30.99■■■□□ 2.55
PMP22-202ENST00000395936 ZNF608Q9ULD9 1512 aaPredicted RBP30.98■■■□□ 2.55
PMP22-202ENST00000395936 DNMBPQ6XZF7 1577 aa30.96■■■□□ 2.55
PMP22-202ENST00000395936 EIF4G3O43432 1585 aaKnown RBP30.79■■■□□ 2.52
PMP22-202ENST00000395936 TARBP1Q13395 1621 aaKnown RBP30.79■■■□□ 2.52
PMP22-202ENST00000395936 POLA1P09884 1462 aaPredicted RBP30.76■■■□□ 2.52
PMP22-202ENST00000395936 AQRO60306 1485 aaKnown RBP eCLIP30.73■■■□□ 2.51
PMP22-202ENST00000395936 SOGA1O94964 1423 aa30.65■■■□□ 2.5
PMP22-202ENST00000395936 RAD54L2Q9Y4B4 1467 aa30.64■■■□□ 2.5
PMP22-202ENST00000395936 RIMBP3CA6NJZ7 1639 aa30.6■■■□□ 2.49
PMP22-202ENST00000395936 RIMBP3BA6NNM3 1639 aa30.6■■■□□ 2.49
PMP22-202ENST00000395936 RIMBP3Q9UFD9 1639 aa30.6■■■□□ 2.49
PMP22-202ENST00000395936 FGD5Q6ZNL6 1462 aa30.57■■■□□ 2.48
PMP22-202ENST00000395936 SUPT5HO00267 1087 aaKnown RBP30.57■■■□□ 2.48
PMP22-202ENST00000395936 CUX1P39880 1505 aa30.57■■■□□ 2.48
PMP22-202ENST00000395936 TDRD9Q8NDG6 1382 aaKnown RBP30.55■■■□□ 2.48
PMP22-202ENST00000395936 CHD1O14646 1710 aa30.53■■■□□ 2.48
PMP22-202ENST00000395936 ARHGEF11O15085 1522 aa30.53■■■□□ 2.48
PMP22-202ENST00000395936 WDR97A6NE52 1622 aa30.51■■■□□ 2.48
PMP22-202ENST00000395936 FBLN2P98095 1184 aa30.51■■■□□ 2.47
PMP22-202ENST00000395936 SNAPC4Q5SXM2 1469 aa30.39■■■□□ 2.46
PMP22-202ENST00000395936 GRIN2BQ13224 1484 aa30.36■■■□□ 2.45
PMP22-202ENST00000395936 MAGI1Q96QZ7 1491 aaPredicted RBP30.36■■■□□ 2.45
PMP22-202ENST00000395936 CYB5RLQ6IPT4 315 aa30.34■■■□□ 2.45
PMP22-202ENST00000395936 CHMP7Q8WUX9 453 aaPredicted RBP30.33■■■□□ 2.45
PMP22-202ENST00000395936 GAPVD1Q14C86 1478 aa30.27■■■□□ 2.44
PMP22-202ENST00000395936 ABCA10Q8WWZ4 1543 aa30.27■■■□□ 2.44
PMP22-202ENST00000395936 SYNJ2O15056 1496 aa30.25■■■□□ 2.43
PMP22-202ENST00000395936 ARAP1Q96P48 1450 aa30.23■■■□□ 2.43
PMP22-202ENST00000395936 CLASP1Q7Z460 1538 aa30.22■■■□□ 2.43
PMP22-202ENST00000395936 SYNJ1O43426 1573 aa30.22■■■□□ 2.43
PMP22-202ENST00000395936 PBRM1Q86U86 1689 aa30.2■■■□□ 2.43
PMP22-202ENST00000395936 ABCA5Q8WWZ7 1642 aa30.18■■■□□ 2.42
PMP22-202ENST00000395936 WRNQ14191 1432 aaPredicted RBP eCLIP30.17■■■□□ 2.42
PMP22-202ENST00000395936 TOP2BQ02880 1626 aa30.11■■■□□ 2.41
PMP22-202ENST00000395936 BIVM-ERCC5R4GMW8 1640 aa30.11■■■□□ 2.41
PMP22-202ENST00000395936 GRIN2AQ12879 1464 aa29.96■■■□□ 2.39
PMP22-202ENST00000395936 TRHP20396 242 aaPredicted RBP29.95■■■□□ 2.39
PMP22-202ENST00000395936 ADAMTS12P58397 1594 aa29.93■■■□□ 2.38
PMP22-202ENST00000395936 FHAD1B1AJZ9 1412 aa29.9■■■□□ 2.38
PMP22-202ENST00000395936 ERICH3Q5RHP9 1530 aa29.89■■■□□ 2.38
PMP22-202ENST00000395936 NUP160Q12769 1436 aa29.88■■■□□ 2.37
PMP22-202ENST00000395936 CEP170Q5SW79 1584 aa29.82■■■□□ 2.36
PMP22-202ENST00000395936 ERCC6L2Q5T890 1561 aa29.73■■■□□ 2.35
PMP22-202ENST00000395936 SHROOM2Q13796 1616 aa29.71■■■□□ 2.35
PMP22-202ENST00000395936 JPH4Q96JJ6 628 aa29.61■■■□□ 2.33
PMP22-202ENST00000395936 PRG4Q92954 1404 aaPredicted RBP29.57■■■□□ 2.32
PMP22-202ENST00000395936 KIF27Q86VH2 1401 aa29.55■■■□□ 2.32
PMP22-202ENST00000395936 IGF1RP08069 1367 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 228.6 ms