Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SND1-IT1Q9HBX3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 AC090192.1-201ENST00000517740 490 ntBASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 AC100803.2-201ENST00000562459 1963 ntBASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 AL603756.1-201ENST00000606511 2163 ntBASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC11.74□□□□□ -0.53
SND1-IT1Q9HBX3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 RPPH1-201ENST00000516869 333 ntBASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 KRT18P6-201ENST00000555540 1265 ntBASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 CD177P1-201ENST00000606252 935 ntBASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 AC022898.2-201ENST00000616822 1312 ntBASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 LINC01451-201ENST00000623792 534 ntBASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 PCDHA1-201ENST00000378133 2726 ntBASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
SND1-IT1Q9HBX3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SND1-IT1Q9HBX3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms