RNA–Protein interactions for RNA: ENST00000538307.1

SH2B3-202, Transcript of SH2B adaptor protein 3, humanhuman

TSL 2 BASIC

Gene SH2B3, Length 2,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-202ENST00000538307 NISCHQ9Y2I1 1504 aa35.17■■■■□ 3.22
SH2B3-202ENST00000538307 CCDC180Q9P1Z9 1646 aa30.61■■■□□ 2.49
SH2B3-202ENST00000538307 SHROOM4Q9ULL8 1493 aa29.77■■■□□ 2.36
SH2B3-202ENST00000538307 ZCCHC6Q5VYS8 1495 aaKnown RBP29.76■■■□□ 2.35
SH2B3-202ENST00000538307 ABCC9O60706 1549 aa29.34■■■□□ 2.29
SH2B3-202ENST00000538307 SUPT5HO00267 1087 aaKnown RBP29.19■■■□□ 2.26
SH2B3-202ENST00000538307 DCAF8L2P0C7V8 631 aa29.17■■■□□ 2.26
SH2B3-202ENST00000538307 DCAF1Q9Y4B6 1507 aa28.94■■■□□ 2.22
SH2B3-202ENST00000538307 MYO15BQ96JP2 1530 aa28.66■■■□□ 2.18
SH2B3-202ENST00000538307 NACADO15069 1562 aa28.63■■■□□ 2.17
SH2B3-202ENST00000538307 RB1CC1Q8TDY2 1594 aa28.49■■■□□ 2.15
SH2B3-202ENST00000538307 CHIC1Q5VXU3 224 aa28.46■■■□□ 2.15
SH2B3-202ENST00000538307 SCRIBQ14160 1630 aa28.15■■■□□ 2.1
SH2B3-202ENST00000538307 UNC13AQ9UPW8 1703 aa27.84■■■□□ 2.05
SH2B3-202ENST00000538307 RSF1Q96T23 1441 aaPredicted RBP27.8■■■□□ 2.04
SH2B3-202ENST00000538307 PABPN1Q86U42 306 aaKnown RBP eCLIP27.64■■■□□ 2.02
SH2B3-202ENST00000538307 BICRAQ9NZM4 1560 aa27.57■■■□□ 2
SH2B3-202ENST00000538307 LOC105371045A0A1W2PR82 267 aa27.54■■■□□ 2
SH2B3-202ENST00000538307 HRCP23327 699 aa27.51■■□□□ 1.99
SH2B3-202ENST00000538307 PCGF6Q9BYE7 350 aa27.45■■□□□ 1.99
SH2B3-202ENST00000538307 CECR2Q9BXF3 1484 aa27.38■■□□□ 1.97
SH2B3-202ENST00000538307 MROH2BQ7Z745 1585 aa27.3■■□□□ 1.96
SH2B3-202ENST00000538307 TRIM41Q8WV44 630 aa27.26■■□□□ 1.95
SH2B3-202ENST00000538307 WIZO95785 1651 aa27.14■■□□□ 1.94
SH2B3-202ENST00000538307 TRIM26Q12899 539 aaPredicted RBP27.04■■□□□ 1.92
SH2B3-202ENST00000538307 BAZ1AQ9NRL2 1556 aaPredicted RBP27.03■■□□□ 1.92
SH2B3-202ENST00000538307 FAM9AQ8IZU1 332 aaPredicted RBP26.94■■□□□ 1.9
SH2B3-202ENST00000538307 SMARCA4P51532 1647 aa26.94■■□□□ 1.9
SH2B3-202ENST00000538307 PPARGC1BQ86YN6 1023 aaKnown RBP26.84■■□□□ 1.89
SH2B3-202ENST00000538307 EIF4G1Q04637 1599 aaKnown RBP26.84■■□□□ 1.89
SH2B3-202ENST00000538307 TOP2AP11388 1531 aaKnown RBP26.78■■□□□ 1.88
SH2B3-202ENST00000538307 EHMT2Q96KQ7 1210 aa26.63■■□□□ 1.85
SH2B3-202ENST00000538307 CCDC88BA6NC98 1476 aa26.63■■□□□ 1.85
SH2B3-202ENST00000538307 SMARCA2P51531 1590 aa26.61■■□□□ 1.85
SH2B3-202ENST00000538307 ATAD2BQ9ULI0 1458 aa26.6■■□□□ 1.85
SH2B3-202ENST00000538307 PEG3Q9GZU2 1588 aa26.59■■□□□ 1.85
SH2B3-202ENST00000538307 CC2D2AQ9P2K1 1620 aa26.51■■□□□ 1.83
SH2B3-202ENST00000538307 ABCC8Q09428 1581 aa26.49■■□□□ 1.83
SH2B3-202ENST00000538307 ZEB1P37275 1124 aaPredicted RBP26.46■■□□□ 1.83
SH2B3-202ENST00000538307 BAZ1BQ9UIG0 1483 aaKnown RBP26.46■■□□□ 1.83
SH2B3-202ENST00000538307 NCAPD3P42695 1498 aa26.42■■□□□ 1.82
SH2B3-202ENST00000538307 HMGXB3Q12766 1538 aa26.33■■□□□ 1.81
SH2B3-202ENST00000538307 SOGA1O94964 1423 aa26.25■■□□□ 1.79
SH2B3-202ENST00000538307 EEA1Q15075 1411 aa26.21■■□□□ 1.79
SH2B3-202ENST00000538307 DNAJC5BQ9UF47 199 aa26.18■■□□□ 1.78
SH2B3-202ENST00000538307 WRNQ14191 1432 aaPredicted RBP eCLIP26.16■■□□□ 1.783e-6■■■■□ 26.3
SH2B3-202ENST00000538307 TNIKQ9UKE5 1360 aa26.14■■□□□ 1.77
SH2B3-202ENST00000538307 CEP162Q5TB80 1403 aa26.13■■□□□ 1.77
SH2B3-202ENST00000538307 CSRNP3Q8WYN3 585 aa26.12■■□□□ 1.77
SH2B3-202ENST00000538307 RUSC2Q8N2Y8 1516 aa26.11■■□□□ 1.77
SH2B3-202ENST00000538307 GOLGA3Q08378 1498 aa25.98■■□□□ 1.75
SH2B3-202ENST00000538307 SYNJ1O43426 1573 aa25.97■■□□□ 1.75
SH2B3-202ENST00000538307 UBTFP17480 764 aaKnown RBP25.94■■□□□ 1.74
SH2B3-202ENST00000538307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.88■■□□□ 1.73
SH2B3-202ENST00000538307 CEP164Q9UPV0 1460 aa25.85■■□□□ 1.73
SH2B3-202ENST00000538307 KIF21BO75037 1637 aa25.84■■□□□ 1.73
SH2B3-202ENST00000538307 CCER1Q8TC90 406 aaPredicted RBP25.84■■□□□ 1.73
SH2B3-202ENST00000538307 TTBK1Q5TCY1 1321 aaPredicted RBP25.78■■□□□ 1.72
SH2B3-202ENST00000538307 CADPSQ9ULU8 1353 aa25.76■■□□□ 1.71
SH2B3-202ENST00000538307 CFTRP13569 1480 aa25.74■■□□□ 1.71
SH2B3-202ENST00000538307 TOP2BQ02880 1626 aa25.7■■□□□ 1.7
SH2B3-202ENST00000538307 CLIP1P30622 1438 aa25.65■■□□□ 1.7
SH2B3-202ENST00000538307 NESP48681 1621 aa25.62■■□□□ 1.69
SH2B3-202ENST00000538307 RAPGEF2Q9Y4G8 1499 aa25.62■■□□□ 1.69
SH2B3-202ENST00000538307 BIVM-ERCC5R4GMW8 1640 aa25.61■■□□□ 1.69
SH2B3-202ENST00000538307 LAMC3Q9Y6N6 1575 aa25.59■■□□□ 1.69
SH2B3-202ENST00000538307 VPS8Q8N3P4 1428 aa25.56■■□□□ 1.68
SH2B3-202ENST00000538307 PRDM2Q13029 1718 aa25.56■■□□□ 1.68
SH2B3-202ENST00000538307 FANCD2Q9BXW9 1451 aa25.47■■□□□ 1.67
SH2B3-202ENST00000538307 PDS5BQ9NTI5 1447 aa25.45■■□□□ 1.66
SH2B3-202ENST00000538307 ERICH3Q5RHP9 1530 aa25.44■■□□□ 1.66
SH2B3-202ENST00000538307 PRXQ9BXM0 1461 aa25.44■■□□□ 1.66
SH2B3-202ENST00000538307 CUX1P39880 1505 aa25.43■■□□□ 1.66
SH2B3-202ENST00000538307 APLP2Q06481 763 aa25.38■■□□□ 1.65
SH2B3-202ENST00000538307 RANGAP1P46060 587 aaPredicted RBP25.33■■□□□ 1.65
SH2B3-202ENST00000538307 HNRNPUL2Q1KMD3 747 aaKnown RBP25.32■■□□□ 1.64
SH2B3-202ENST00000538307 DIEXFQ68CQ4 756 aaKnown RBP25.32■■□□□ 1.64
SH2B3-202ENST00000538307 KIF27Q86VH2 1401 aa25.31■■□□□ 1.64
SH2B3-202ENST00000538307 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
SH2B3-202ENST00000538307 ARAP1Q96P48 1450 aa25.27■■□□□ 1.64
SH2B3-202ENST00000538307 SCAF1Q9H7N4 1312 aaKnown RBP25.27■■□□□ 1.64
SH2B3-202ENST00000538307 ERCC6Q03468 1493 aa25.23■■□□□ 1.63
SH2B3-202ENST00000538307 ZNF316A6NFI3 1004 aaPredicted RBP25.18■■□□□ 1.62
SH2B3-202ENST00000538307 DNMBPQ6XZF7 1577 aa25.15■■□□□ 1.62
SH2B3-202ENST00000538307 URB2Q14146 1524 aaKnown RBP25.14■■□□□ 1.62
SH2B3-202ENST00000538307 TOPBP1Q92547 1522 aa25.14■■□□□ 1.61
SH2B3-202ENST00000538307 MRC2Q9UBG0 1479 aa25.11■■□□□ 1.61
SH2B3-202ENST00000538307 ACIN1Q9UKV3 1341 aaKnown RBP25.09■■□□□ 1.61
SH2B3-202ENST00000538307 KANK4Q5T7N3 995 aaPredicted RBP25.07■■□□□ 1.6
SH2B3-202ENST00000538307 FGD5Q6ZNL6 1462 aa25.06■■□□□ 1.6
SH2B3-202ENST00000538307 ARHGAP35Q9NRY4 1499 aa25.06■■□□□ 1.6
SH2B3-202ENST00000538307 CUX2O14529 1486 aa25.04■■□□□ 1.6
SH2B3-202ENST00000538307 IGF1RP08069 1367 aa25.04■■□□□ 1.6
SH2B3-202ENST00000538307 NEUROD1Q13562 356 aa25.03■■□□□ 1.6
SH2B3-202ENST00000538307 RRBP1Q9P2E9 1410 aaKnown RBP24.99■■□□□ 1.59
SH2B3-202ENST00000538307 POLA1P09884 1462 aaPredicted RBP24.98■■□□□ 1.59
SH2B3-202ENST00000538307 CENPBP07199 599 aaPredicted RBP24.96■■□□□ 1.59
SH2B3-202ENST00000538307 WDR62O43379 1518 aa24.95■■□□□ 1.58
SH2B3-202ENST00000538307 CLSPNQ9HAW4 1339 aa24.95■■□□□ 1.58
SH2B3-202ENST00000538307 THOC2Q8NI27 1593 aaKnown RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms