RNA–Protein interactions for RNA: ENST00000615806.4

SDK1-210, Transcript of sidekick cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SDK1, Length 10,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-210ENST00000615806 DCAF8L2P0C7V8 631 aa26.34■■□□□ 1.81
SDK1-210ENST00000615806 EHMT2Q96KQ7 1210 aa25.14■■□□□ 1.62
SDK1-210ENST00000615806 SUPT5HO00267 1087 aaKnown RBP24.75■■□□□ 1.55
SDK1-210ENST00000615806 SHROOM4Q9ULL8 1493 aa24.32■■□□□ 1.48
SDK1-210ENST00000615806 TTBK1Q5TCY1 1321 aaPredicted RBP24.23■■□□□ 1.47
SDK1-210ENST00000615806 PELP1Q8IZL8 1130 aaKnown RBP23.94■■□□□ 1.42
SDK1-210ENST00000615806 RANGAP1P46060 587 aaPredicted RBP23.75■■□□□ 1.39
SDK1-210ENST00000615806 FAM9AQ8IZU1 332 aaPredicted RBP23.69■■□□□ 1.38
SDK1-210ENST00000615806 APLP2Q06481 763 aa23.61■■□□□ 1.37
SDK1-210ENST00000615806 ERICH6Q7L0X2 663 aa23.57■■□□□ 1.36
SDK1-210ENST00000615806 PCGF6Q9BYE7 350 aa23.45■■□□□ 1.34
SDK1-210ENST00000615806 ATP1B4Q9UN42 357 aaPredicted RBP23.36■■□□□ 1.33
SDK1-210ENST00000615806 YTHDC1Q96MU7 727 aaKnown RBP23.23■■□□□ 1.31
SDK1-210ENST00000615806 MYT1Q01538 1121 aa23.2■■□□□ 1.3
SDK1-210ENST00000615806 CCER1Q8TC90 406 aaPredicted RBP22.96■■□□□ 1.27
SDK1-210ENST00000615806 PPARGC1BQ86YN6 1023 aaKnown RBP22.94■■□□□ 1.26
SDK1-210ENST00000615806 CENPBP07199 599 aaPredicted RBP22.86■■□□□ 1.25
SDK1-210ENST00000615806 CNGB1Q14028 1251 aaPredicted RBP22.8■■□□□ 1.24
SDK1-210ENST00000615806 POLR3GLQ9BT43 218 aa22.71■■□□□ 1.23
SDK1-210ENST00000615806 NEFLP07196 543 aa22.69■■□□□ 1.22
SDK1-210ENST00000615806 CHIC1Q5VXU3 224 aa22.69■■□□□ 1.22
SDK1-210ENST00000615806 UBTFP17480 764 aaKnown RBP22.61■■□□□ 1.21
SDK1-210ENST00000615806 MYT1LQ9UL68 1186 aa22.52■■□□□ 1.2
SDK1-210ENST00000615806 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
SDK1-210ENST00000615806 NISCHQ9Y2I1 1504 aa22.48■■□□□ 1.19
SDK1-210ENST00000615806 ITGAEP38570 1179 aa22.45■■□□□ 1.18
SDK1-210ENST00000615806 DAXXQ9UER7 740 aaPredicted RBP22.38■■□□□ 1.17
SDK1-210ENST00000615806 SLC4A1APQ9BWU0 796 aaKnown RBP22.31■■□□□ 1.16
SDK1-210ENST00000615806 ZEB1P37275 1124 aaPredicted RBP22.26■■□□□ 1.15
SDK1-210ENST00000615806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.24■■□□□ 1.15
SDK1-210ENST00000615806 HNRNPUL2Q1KMD3 747 aaKnown RBP22.24■■□□□ 1.15
SDK1-210ENST00000615806 BCL11AQ9H165 835 aa22.03■■□□□ 1.12
SDK1-210ENST00000615806 CLSPNQ9HAW4 1339 aa21.92■■□□□ 1.1
SDK1-210ENST00000615806 ZNF316A6NFI3 1004 aaPredicted RBP21.9■■□□□ 1.1
SDK1-210ENST00000615806 BCANQ96GW7 911 aa21.81■■□□□ 1.08
SDK1-210ENST00000615806 HRCP23327 699 aa21.74■■□□□ 1.07
SDK1-210ENST00000615806 LOC105371045A0A1W2PR82 267 aa21.74■■□□□ 1.07
SDK1-210ENST00000615806 SLC24A1O60721 1099 aa21.71■■□□□ 1.07
SDK1-210ENST00000615806 RTL5Q5HYW3 569 aaPredicted RBP21.68■■□□□ 1.06
SDK1-210ENST00000615806 TRIM26Q12899 539 aaPredicted RBP21.64■■□□□ 1.06
SDK1-210ENST00000615806 NEUROD1Q13562 356 aa21.55■■□□□ 1.04
SDK1-210ENST00000615806 ZNF326Q5BKZ1 582 aaKnown RBP21.54■■□□□ 1.04
SDK1-210ENST00000615806 FAM50AQ14320 339 aaKnown RBP21.52■■□□□ 1.04
SDK1-210ENST00000615806 TRIM52Q96A61 297 aa21.46■■□□□ 1.03
SDK1-210ENST00000615806 DIEXFQ68CQ4 756 aaKnown RBP21.36■■□□□ 1.01
SDK1-210ENST00000615806 PLPPR3Q6T4P5 718 aa21.32■■□□□ 1
SDK1-210ENST00000615806 ARID3CA6NKF2 412 aa21.27■■□□□ 1
SDK1-210ENST00000615806 ZBTB47Q9UFB7 747 aaPredicted RBP21.26■□□□□ 0.99
SDK1-210ENST00000615806 CANXP27824 592 aaKnown RBP21.26■□□□□ 0.99
SDK1-210ENST00000615806 NPM2Q86SE8 214 aaKnown RBP21.23■□□□□ 0.99
SDK1-210ENST00000615806 GTF3C3Q9Y5Q9 886 aa21.17■□□□□ 0.98
SDK1-210ENST00000615806 FBLN2P98095 1184 aa21.13■□□□□ 0.97
SDK1-210ENST00000615806 CDK11AQ9UQ88 783 aaPredicted RBP21.07■□□□□ 0.96
SDK1-210ENST00000615806 ARXQ96QS3 562 aa21.02■□□□□ 0.96
SDK1-210ENST00000615806 ANP32CO43423 234 aa21.01■□□□□ 0.95
SDK1-210ENST00000615806 EIF5BO60841 1220 aaKnown RBP21.01■□□□□ 0.95
SDK1-210ENST00000615806 SENP3Q9H4L4 574 aaPredicted RBP20.95■□□□□ 0.94
SDK1-210ENST00000615806 P3H3Q8IVL6 736 aa20.94■□□□□ 0.94
SDK1-210ENST00000615806 PABPN1Q86U42 306 aaKnown RBP eCLIP20.91■□□□□ 0.94
SDK1-210ENST00000615806 PLEKHG5O94827 1062 aa20.89■□□□□ 0.93
SDK1-210ENST00000615806 SALL2Q9Y467 1007 aaPredicted RBP20.88■□□□□ 0.93
SDK1-210ENST00000615806 ZNF777Q9ULD5 760 aaPredicted RBP20.83■□□□□ 0.93
SDK1-210ENST00000615806 NEFMP07197 916 aa20.79■□□□□ 0.92
SDK1-210ENST00000615806 A0A0G2JS52 829 aa20.79■□□□□ 0.92
SDK1-210ENST00000615806 HSP90AA1P07900 732 aaKnown RBP20.76■□□□□ 0.91
SDK1-210ENST00000615806 ANP32AP39687 249 aaKnown RBP20.76■□□□□ 0.91
SDK1-210ENST00000615806 CHGAP10645 457 aaKnown RBP20.75■□□□□ 0.91
SDK1-210ENST00000615806 NBR1Q14596 966 aa20.75■□□□□ 0.91
SDK1-210ENST00000615806 SCAF1Q9H7N4 1312 aaKnown RBP20.72■□□□□ 0.91
SDK1-210ENST00000615806 FKBP8Q14318 412 aa20.63■□□□□ 0.89
SDK1-210ENST00000615806 ZBTB7CA1YPR0 619 aa20.63■□□□□ 0.89
SDK1-210ENST00000615806 FAM9BQ8IZU0 186 aa20.6■□□□□ 0.89
SDK1-210ENST00000615806 STAG3Q9UJ98 1225 aa20.6■□□□□ 0.89
SDK1-210ENST00000615806 SENP3-EIF4A1A0A087X0R7 540 aa20.6■□□□□ 0.89
SDK1-210ENST00000615806 TPRNQ4KMQ1 711 aa20.59■□□□□ 0.89
SDK1-210ENST00000615806 TULP1O00294 542 aaPredicted RBP20.58■□□□□ 0.89
SDK1-210ENST00000615806 ANP32BQ92688 251 aaKnown RBP20.58■□□□□ 0.88
SDK1-210ENST00000615806 IRX6P78412 446 aaPredicted RBP20.56■□□□□ 0.88
SDK1-210ENST00000615806 ESF1Q9H501 851 aaKnown RBP20.51■□□□□ 0.87
SDK1-210ENST00000615806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.47■□□□□ 0.879e-7■■□□□ 12.2
SDK1-210ENST00000615806 HNRNPUQ00839 825 aaKnown RBP eCLIP20.44■□□□□ 0.86
SDK1-210ENST00000615806 TAOK2Q9UL54 1235 aa20.43■□□□□ 0.86
SDK1-210ENST00000615806 ACIN1Q9UKV3 1341 aaKnown RBP20.42■□□□□ 0.86
SDK1-210ENST00000615806 ABCC9O60706 1549 aa20.4■□□□□ 0.86
SDK1-210ENST00000615806 HIRIP3Q9BW71 556 aaPredicted RBP20.39■□□□□ 0.85
SDK1-210ENST00000615806 DDX10Q13206 875 aaKnown RBP20.38■□□□□ 0.85
SDK1-210ENST00000615806 UPF2Q9HAU5 1272 aaKnown RBP20.36■□□□□ 0.85
SDK1-210ENST00000615806 KDM2AQ9Y2K7 1162 aa20.35■□□□□ 0.85
SDK1-210ENST00000615806 C14orf37Q86TY3 774 aa20.35■□□□□ 0.85
SDK1-210ENST00000615806 CHIC2Q9UKJ5 165 aa20.34■□□□□ 0.85
SDK1-210ENST00000615806 CCDC136Q96JN2 1154 aa20.26■□□□□ 0.83
SDK1-210ENST00000615806 CDK11BP21127 795 aaKnown RBP20.25■□□□□ 0.83
SDK1-210ENST00000615806 NCBP3Q53F19 620 aaKnown RBP20.22■□□□□ 0.83
SDK1-210ENST00000615806 TONSLQ96HA7 1378 aa20.19■□□□□ 0.82
SDK1-210ENST00000615806 TMC1Q8TDI8 760 aa20.17■□□□□ 0.82
SDK1-210ENST00000615806 WDR43Q15061 677 aaKnown RBP eCLIP20.17■□□□□ 0.82
SDK1-210ENST00000615806 NCLP19338 710 aaKnown RBP20.16■□□□□ 0.82
SDK1-210ENST00000615806 GLIPR1L2Q4G1C9 344 aa20.11■□□□□ 0.81
SDK1-210ENST00000615806 RTN4Q9NQC3 1192 aaKnown RBP20.11■□□□□ 0.81
SDK1-210ENST00000615806 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms