RNA–Protein interactions for RNA: ENST00000542797.1

AC117500.4-201, humanhuman

TSL 3 BASIC

Gene AC117500.4, Length 617 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC117500.4-201ENST00000542797 NISCHQ9Y2I1 1504 aa47.04■■■■■ 5.12
AC117500.4-201ENST00000542797 CCDC180Q9P1Z9 1646 aa41.95■■■■■ 4.31
AC117500.4-201ENST00000542797 ABCC9O60706 1549 aa41.5■■■■■ 4.23
AC117500.4-201ENST00000542797 DCAF8L2P0C7V8 631 aa39.82■■■■□ 3.97
AC117500.4-201ENST00000542797 RB1CC1Q8TDY2 1594 aa39.7■■■■□ 3.95
AC117500.4-201ENST00000542797 NACADO15069 1562 aa39.5■■■■□ 3.91
AC117500.4-201ENST00000542797 ZCCHC6Q5VYS8 1495 aaKnown RBP39.1■■■■□ 3.85
AC117500.4-201ENST00000542797 MYO15BQ96JP2 1530 aa39.01■■■■□ 3.84
AC117500.4-201ENST00000542797 DCAF1Q9Y4B6 1507 aa38.78■■■■□ 3.8
AC117500.4-201ENST00000542797 UNC13AQ9UPW8 1703 aa38.77■■■■□ 3.8
AC117500.4-201ENST00000542797 PABPN1Q86U42 306 aaKnown RBP eCLIP38.77■■■■□ 3.8
AC117500.4-201ENST00000542797 SCRIBQ14160 1630 aa38.43■■■■□ 3.74
AC117500.4-201ENST00000542797 BICRAQ9NZM4 1560 aa38.4■■■■□ 3.74
AC117500.4-201ENST00000542797 DNAJC5BQ9UF47 199 aa38.22■■■■□ 3.71
AC117500.4-201ENST00000542797 SHROOM4Q9ULL8 1493 aa37.9■■■■□ 3.66
AC117500.4-201ENST00000542797 EIF4G1Q04637 1599 aaKnown RBP37.49■■■■□ 3.59
AC117500.4-201ENST00000542797 CC2D2AQ9P2K1 1620 aa37.44■■■■□ 3.58
AC117500.4-201ENST00000542797 CECR2Q9BXF3 1484 aa37.26■■■■□ 3.56
AC117500.4-201ENST00000542797 SMARCA4P51532 1647 aa36.61■■■■□ 3.45
AC117500.4-201ENST00000542797 BAZ1AQ9NRL2 1556 aaPredicted RBP36.53■■■■□ 3.44
AC117500.4-201ENST00000542797 ATAD2BQ9ULI0 1458 aa36.43■■■■□ 3.42
AC117500.4-201ENST00000542797 SMARCA2P51531 1590 aa36.43■■■■□ 3.42
AC117500.4-201ENST00000542797 NCAPD3P42695 1498 aa36.4■■■■□ 3.42
AC117500.4-201ENST00000542797 MROH2BQ7Z745 1585 aa36.28■■■■□ 3.4
AC117500.4-201ENST00000542797 BAZ1BQ9UIG0 1483 aaKnown RBP36.24■■■■□ 3.39
AC117500.4-201ENST00000542797 HMGXB3Q12766 1538 aa36.24■■■■□ 3.39
AC117500.4-201ENST00000542797 PEG3Q9GZU2 1588 aa36.1■■■■□ 3.37
AC117500.4-201ENST00000542797 WIZO95785 1651 aa35.94■■■■□ 3.34
AC117500.4-201ENST00000542797 ERCC6Q03468 1493 aa35.87■■■■□ 3.33
AC117500.4-201ENST00000542797 NESP48681 1621 aa35.78■■■■□ 3.32
AC117500.4-201ENST00000542797 RSF1Q96T23 1441 aaPredicted RBP35.73■■■■□ 3.31
AC117500.4-201ENST00000542797 LAMC3Q9Y6N6 1575 aa35.58■■■■□ 3.29
AC117500.4-201ENST00000542797 TOP2AP11388 1531 aaKnown RBP35.49■■■■□ 3.27
AC117500.4-201ENST00000542797 CADPSQ9ULU8 1353 aa35.4■■■■□ 3.26
AC117500.4-201ENST00000542797 CUX2O14529 1486 aa35.4■■■■□ 3.26
AC117500.4-201ENST00000542797 PDS5BQ9NTI5 1447 aa35.4■■■■□ 3.26
AC117500.4-201ENST00000542797 KIF21AQ7Z4S6 1674 aa35.37■■■■□ 3.25
AC117500.4-201ENST00000542797 THOC2Q8NI27 1593 aaKnown RBP35.21■■■■□ 3.23
AC117500.4-201ENST00000542797 CFTRP13569 1480 aa35.09■■■■□ 3.21
AC117500.4-201ENST00000542797 CCDC88BA6NC98 1476 aa35.08■■■■□ 3.21
AC117500.4-201ENST00000542797 CEP164Q9UPV0 1460 aa35.08■■■■□ 3.21
AC117500.4-201ENST00000542797 FANCD2Q9BXW9 1451 aa35.06■■■■□ 3.2
AC117500.4-201ENST00000542797 MRC2Q9UBG0 1479 aa35.05■■■■□ 3.2
AC117500.4-201ENST00000542797 SUPT5HO00267 1087 aaKnown RBP34.92■■■■□ 3.18
AC117500.4-201ENST00000542797 PRDM2Q13029 1718 aa34.88■■■■□ 3.17
AC117500.4-201ENST00000542797 WDR62O43379 1518 aa34.87■■■■□ 3.17
AC117500.4-201ENST00000542797 URB2Q14146 1524 aaKnown RBP34.68■■■■□ 3.14
AC117500.4-201ENST00000542797 DNAJC5Q9H3Z4 198 aa34.66■■■■□ 3.14
AC117500.4-201ENST00000542797 TOPBP1Q92547 1522 aa34.44■■■■□ 3.1
AC117500.4-201ENST00000542797 ABCC8Q09428 1581 aa34.4■■■■□ 3.1
AC117500.4-201ENST00000542797 DNMBPQ6XZF7 1577 aa34.38■■■■□ 3.09
AC117500.4-201ENST00000542797 IFT140Q96RY7 1462 aa34.3■■■■□ 3.08
AC117500.4-201ENST00000542797 ZNF608Q9ULD9 1512 aaPredicted RBP34.18■■■■□ 3.06
AC117500.4-201ENST00000542797 POLA1P09884 1462 aaPredicted RBP34.12■■■■□ 3.05
AC117500.4-201ENST00000542797 EIF4G3O43432 1585 aaKnown RBP34.06■■■■□ 3.04
AC117500.4-201ENST00000542797 CUX1P39880 1505 aa34.06■■■■□ 3.04
AC117500.4-201ENST00000542797 FGD5Q6ZNL6 1462 aa34.05■■■■□ 3.04
AC117500.4-201ENST00000542797 RAD54L2Q9Y4B4 1467 aa34.04■■■■□ 3.04
AC117500.4-201ENST00000542797 TARBP1Q13395 1621 aaKnown RBP34.04■■■■□ 3.04
AC117500.4-201ENST00000542797 SOGA1O94964 1423 aa34.04■■■■□ 3.04
AC117500.4-201ENST00000542797 AQRO60306 1485 aaKnown RBP eCLIP33.99■■■■□ 3.03
AC117500.4-201ENST00000542797 OSCARQ8IYS5 282 aa33.98■■■■□ 3.03
AC117500.4-201ENST00000542797 TDRD9Q8NDG6 1382 aaKnown RBP33.9■■■■□ 3.02
AC117500.4-201ENST00000542797 FBLN2P98095 1184 aa33.86■■■■□ 3.01
AC117500.4-201ENST00000542797 WRNQ14191 1432 aaPredicted RBP eCLIP33.79■■■■□ 3
AC117500.4-201ENST00000542797 CHD1O14646 1710 aa33.73■■■□□ 2.99
AC117500.4-201ENST00000542797 WDR97A6NE52 1622 aa33.71■■■□□ 2.99
AC117500.4-201ENST00000542797 SYNJ1O43426 1573 aa33.7■■■□□ 2.99
AC117500.4-201ENST00000542797 TRIM41Q8WV44 630 aa33.7■■■□□ 2.99
AC117500.4-201ENST00000542797 TOP2BQ02880 1626 aa33.68■■■□□ 2.98
AC117500.4-201ENST00000542797 SNAPC4Q5SXM2 1469 aa33.68■■■□□ 2.98
AC117500.4-201ENST00000542797 BIVM-ERCC5R4GMW8 1640 aa33.68■■■□□ 2.98
AC117500.4-201ENST00000542797 GRIN2BQ13224 1484 aa33.64■■■□□ 2.98
AC117500.4-201ENST00000542797 GAPVD1Q14C86 1478 aa33.63■■■□□ 2.97
AC117500.4-201ENST00000542797 ABCA10Q8WWZ4 1543 aa33.61■■■□□ 2.97
AC117500.4-201ENST00000542797 PBRM1Q86U86 1689 aa33.61■■■□□ 2.97
AC117500.4-201ENST00000542797 CHMP7Q8WUX9 453 aaPredicted RBP33.6■■■□□ 2.97
AC117500.4-201ENST00000542797 MAGI1Q96QZ7 1491 aaPredicted RBP33.55■■■□□ 2.96
AC117500.4-201ENST00000542797 ABCA5Q8WWZ7 1642 aa33.52■■■□□ 2.96
AC117500.4-201ENST00000542797 RIMBP3CA6NJZ7 1639 aa33.45■■■□□ 2.95
AC117500.4-201ENST00000542797 RIMBP3BA6NNM3 1639 aa33.45■■■□□ 2.95
AC117500.4-201ENST00000542797 RIMBP3Q9UFD9 1639 aa33.45■■■□□ 2.95
AC117500.4-201ENST00000542797 SYNJ2O15056 1496 aa33.44■■■□□ 2.94
AC117500.4-201ENST00000542797 ARHGEF11O15085 1522 aa33.38■■■□□ 2.93
AC117500.4-201ENST00000542797 ADAMTS12P58397 1594 aa33.26■■■□□ 2.92
AC117500.4-201ENST00000542797 CLASP1Q7Z460 1538 aa33.23■■■□□ 2.91
AC117500.4-201ENST00000542797 CYB5RLQ6IPT4 315 aa33.22■■■□□ 2.91
AC117500.4-201ENST00000542797 ERICH3Q5RHP9 1530 aa33.22■■■□□ 2.91
AC117500.4-201ENST00000542797 GRIN2AQ12879 1464 aa33.2■■■□□ 2.91
AC117500.4-201ENST00000542797 FHAD1B1AJZ9 1412 aa33.19■■■□□ 2.9
AC117500.4-201ENST00000542797 KIF27Q86VH2 1401 aa33.11■■■□□ 2.89
AC117500.4-201ENST00000542797 ARAP1Q96P48 1450 aa33.07■■■□□ 2.88
AC117500.4-201ENST00000542797 CEP170Q5SW79 1584 aa33.05■■■□□ 2.88
AC117500.4-201ENST00000542797 NUP160Q12769 1436 aa32.98■■■□□ 2.87
AC117500.4-201ENST00000542797 CUL7Q14999 1698 aa32.92■■■□□ 2.86
AC117500.4-201ENST00000542797 IGF1RP08069 1367 aa32.92■■■□□ 2.86
AC117500.4-201ENST00000542797 ERCC6L2Q5T890 1561 aa32.82■■■□□ 2.84
AC117500.4-201ENST00000542797 CARMIL1Q5VZK9 1371 aa32.81■■■□□ 2.84
AC117500.4-201ENST00000542797 TRHP20396 242 aaPredicted RBP32.79■■■□□ 2.84
AC117500.4-201ENST00000542797 RUSC2Q8N2Y8 1516 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms