RNA–Protein interactions for RNA: ENST00000611173.1

HMCN2-204, Transcript of hemicentin 2, humanhuman

TSL 1 (best) BASIC

Gene HMCN2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2-204ENST00000611173 NISCHQ9Y2I1 1504 aa37.94■■■■□ 3.66
HMCN2-204ENST00000611173 CCDC180Q9P1Z9 1646 aa33.15■■■□□ 2.9
HMCN2-204ENST00000611173 ZCCHC6Q5VYS8 1495 aaKnown RBP31.86■■■□□ 2.69
HMCN2-204ENST00000611173 ABCC9O60706 1549 aa31.45■■■□□ 2.62
HMCN2-204ENST00000611173 DCAF1Q9Y4B6 1507 aa31.34■■■□□ 2.61
HMCN2-204ENST00000611173 DCAF8L2P0C7V8 631 aa31.3■■■□□ 2.6
HMCN2-204ENST00000611173 MYO15BQ96JP2 1530 aa30.99■■■□□ 2.55
HMCN2-204ENST00000611173 SHROOM4Q9ULL8 1493 aa30.89■■■□□ 2.54
HMCN2-204ENST00000611173 NACADO15069 1562 aa30.86■■■□□ 2.53
HMCN2-204ENST00000611173 RB1CC1Q8TDY2 1594 aa30.63■■■□□ 2.49
HMCN2-204ENST00000611173 SCRIBQ14160 1630 aa30.49■■■□□ 2.47
HMCN2-204ENST00000611173 UNC13AQ9UPW8 1703 aa30.14■■■□□ 2.42
HMCN2-204ENST00000611173 SUPT5HO00267 1087 aaKnown RBP30.06■■■□□ 2.4
HMCN2-204ENST00000611173 BICRAQ9NZM4 1560 aa29.8■■■□□ 2.36
HMCN2-204ENST00000611173 PABPN1Q86U42 306 aaKnown RBP eCLIP29.63■■■□□ 2.33
HMCN2-204ENST00000611173 CECR2Q9BXF3 1484 aa29.53■■■□□ 2.32
HMCN2-204ENST00000611173 RSF1Q96T23 1441 aaPredicted RBP29.39■■■□□ 2.3
HMCN2-204ENST00000611173 MROH2BQ7Z745 1585 aa29.35■■■□□ 2.29
HMCN2-204ENST00000611173 BAZ1AQ9NRL2 1556 aaPredicted RBP29.28■■■□□ 2.28
HMCN2-204ENST00000611173 SMARCA4P51532 1647 aa29.22■■■□□ 2.27
HMCN2-204ENST00000611173 CHIC1Q5VXU3 224 aa29.18■■■□□ 2.26
HMCN2-204ENST00000611173 WIZO95785 1651 aa29.12■■■□□ 2.25
HMCN2-204ENST00000611173 EIF4G1Q04637 1599 aaKnown RBP28.86■■■□□ 2.21
HMCN2-204ENST00000611173 PEG3Q9GZU2 1588 aa28.84■■■□□ 2.21
HMCN2-204ENST00000611173 TOP2AP11388 1531 aaKnown RBP28.77■■■□□ 2.2
HMCN2-204ENST00000611173 ATAD2BQ9ULI0 1458 aa28.74■■■□□ 2.19
HMCN2-204ENST00000611173 SMARCA2P51531 1590 aa28.69■■■□□ 2.18
HMCN2-204ENST00000611173 BAZ1BQ9UIG0 1483 aaKnown RBP28.55■■■□□ 2.16
HMCN2-204ENST00000611173 NCAPD3P42695 1498 aa28.48■■■□□ 2.15
HMCN2-204ENST00000611173 CC2D2AQ9P2K1 1620 aa28.47■■■□□ 2.15
HMCN2-204ENST00000611173 CCDC88BA6NC98 1476 aa28.47■■■□□ 2.15
HMCN2-204ENST00000611173 HMGXB3Q12766 1538 aa28.45■■■□□ 2.15
HMCN2-204ENST00000611173 TRIM41Q8WV44 630 aa28.2■■■□□ 2.1
HMCN2-204ENST00000611173 LOC105371045A0A1W2PR82 267 aa28.12■■■□□ 2.09
HMCN2-204ENST00000611173 ABCC8Q09428 1581 aa27.88■■■□□ 2.05
HMCN2-204ENST00000611173 DNAJC5BQ9UF47 199 aa27.86■■■□□ 2.05
HMCN2-204ENST00000611173 CFTRP13569 1480 aa27.83■■■□□ 2.05
HMCN2-204ENST00000611173 PRDM2Q13029 1718 aa27.75■■■□□ 2.03
HMCN2-204ENST00000611173 CADPSQ9ULU8 1353 aa27.73■■■□□ 2.03
HMCN2-204ENST00000611173 FAM9AQ8IZU1 332 aaPredicted RBP27.73■■■□□ 2.03
HMCN2-204ENST00000611173 WRNQ14191 1432 aaPredicted RBP eCLIP27.64■■■□□ 2.02
HMCN2-204ENST00000611173 NESP48681 1621 aa27.61■■■□□ 2.01
HMCN2-204ENST00000611173 SYNJ1O43426 1573 aa27.6■■■□□ 2.01
HMCN2-204ENST00000611173 PCGF6Q9BYE7 350 aa27.57■■■□□ 2
HMCN2-204ENST00000611173 LAMC3Q9Y6N6 1575 aa27.54■■■□□ 2
HMCN2-204ENST00000611173 TOP2BQ02880 1626 aa27.47■■□□□ 1.99
HMCN2-204ENST00000611173 BIVM-ERCC5R4GMW8 1640 aa27.46■■□□□ 1.99
HMCN2-204ENST00000611173 FANCD2Q9BXW9 1451 aa27.45■■□□□ 1.99
HMCN2-204ENST00000611173 CUX1P39880 1505 aa27.44■■□□□ 1.98
HMCN2-204ENST00000611173 HRCP23327 699 aa27.37■■□□□ 1.97
HMCN2-204ENST00000611173 TRIM26Q12899 539 aaPredicted RBP27.36■■□□□ 1.97
HMCN2-204ENST00000611173 EEA1Q15075 1411 aa27.33■■□□□ 1.96
HMCN2-204ENST00000611173 EHMT2Q96KQ7 1210 aa27.31■■□□□ 1.96
HMCN2-204ENST00000611173 SOGA1O94964 1423 aa27.31■■□□□ 1.96
HMCN2-204ENST00000611173 KIF21AQ7Z4S6 1674 aa27.3■■□□□ 1.96
HMCN2-204ENST00000611173 PDS5BQ9NTI5 1447 aa27.28■■□□□ 1.96
HMCN2-204ENST00000611173 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
HMCN2-204ENST00000611173 RUSC2Q8N2Y8 1516 aa27.24■■□□□ 1.95
HMCN2-204ENST00000611173 DNMBPQ6XZF7 1577 aa27.2■■□□□ 1.94
HMCN2-204ENST00000611173 CSRNP3Q8WYN3 585 aa27.18■■□□□ 1.94
HMCN2-204ENST00000611173 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
HMCN2-204ENST00000611173 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
HMCN2-204ENST00000611173 FGD5Q6ZNL6 1462 aa27.13■■□□□ 1.93
HMCN2-204ENST00000611173 TNIKQ9UKE5 1360 aa27.08■■□□□ 1.93
HMCN2-204ENST00000611173 POLA1P09884 1462 aaPredicted RBP27.02■■□□□ 1.92
HMCN2-204ENST00000611173 GOLGA3Q08378 1498 aa26.99■■□□□ 1.91
HMCN2-204ENST00000611173 MRC2Q9UBG0 1479 aa26.99■■□□□ 1.91
HMCN2-204ENST00000611173 CEP162Q5TB80 1403 aa26.99■■□□□ 1.91
HMCN2-204ENST00000611173 RAD54L2Q9Y4B4 1467 aa26.95■■□□□ 1.9
HMCN2-204ENST00000611173 KIF27Q86VH2 1401 aa26.92■■□□□ 1.9
HMCN2-204ENST00000611173 CUX2O14529 1486 aa26.92■■□□□ 1.9
HMCN2-204ENST00000611173 ERCC6Q03468 1493 aa26.92■■□□□ 1.9
HMCN2-204ENST00000611173 KIF21BO75037 1637 aa26.91■■□□□ 1.9
HMCN2-204ENST00000611173 WDR62O43379 1518 aa26.87■■□□□ 1.89
HMCN2-204ENST00000611173 ABCA10Q8WWZ4 1543 aa26.87■■□□□ 1.89
HMCN2-204ENST00000611173 WDR97A6NE52 1622 aa26.87■■□□□ 1.89
HMCN2-204ENST00000611173 UBTFP17480 764 aaKnown RBP26.87■■□□□ 1.89
HMCN2-204ENST00000611173 THOC2Q8NI27 1593 aaKnown RBP26.86■■□□□ 1.89
HMCN2-204ENST00000611173 TARBP1Q13395 1621 aaKnown RBP26.8■■□□□ 1.88
HMCN2-204ENST00000611173 PRXQ9BXM0 1461 aa26.76■■□□□ 1.87
HMCN2-204ENST00000611173 RAPGEF2Q9Y4G8 1499 aa26.75■■□□□ 1.87
HMCN2-204ENST00000611173 IGF1RP08069 1367 aa26.73■■□□□ 1.87
HMCN2-204ENST00000611173 PPARGC1BQ86YN6 1023 aaKnown RBP26.72■■□□□ 1.87
HMCN2-204ENST00000611173 ABCA5Q8WWZ7 1642 aa26.71■■□□□ 1.87
HMCN2-204ENST00000611173 ERICH3Q5RHP9 1530 aa26.69■■□□□ 1.86
HMCN2-204ENST00000611173 TDRD9Q8NDG6 1382 aaKnown RBP26.67■■□□□ 1.86
HMCN2-204ENST00000611173 IFT140Q96RY7 1462 aa26.62■■□□□ 1.85
HMCN2-204ENST00000611173 ZEB1P37275 1124 aaPredicted RBP26.61■■□□□ 1.85
HMCN2-204ENST00000611173 CLIP1P30622 1438 aa26.61■■□□□ 1.85
HMCN2-204ENST00000611173 GAPVD1Q14C86 1478 aa26.61■■□□□ 1.85
HMCN2-204ENST00000611173 CARMIL1Q5VZK9 1371 aa26.58■■□□□ 1.84
HMCN2-204ENST00000611173 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
HMCN2-204ENST00000611173 CUL7Q14999 1698 aa26.54■■□□□ 1.84
HMCN2-204ENST00000611173 PBRM1Q86U86 1689 aa26.54■■□□□ 1.84
HMCN2-204ENST00000611173 AQRO60306 1485 aaKnown RBP eCLIP26.53■■□□□ 1.84
HMCN2-204ENST00000611173 VPS8Q8N3P4 1428 aa26.48■■□□□ 1.83
HMCN2-204ENST00000611173 EIF4G3O43432 1585 aaKnown RBP26.46■■□□□ 1.83
HMCN2-204ENST00000611173 GRIN2BQ13224 1484 aa26.41■■□□□ 1.82
HMCN2-204ENST00000611173 ADAMTS12P58397 1594 aa26.36■■□□□ 1.81
HMCN2-204ENST00000611173 TTBK1Q5TCY1 1321 aaPredicted RBP26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms