Protein–RNA interactions for Protein: Q9Y221

NIP7, 60S ribosome subunit biogenesis protein NIP7 homolog, humanhuman

Known RBP eCLIP

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7Q9Y221 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.363e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.193e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.193e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-203ENST00000393088 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.053e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-204ENST00000402629 1450 ntTSL 1 (best) BASIC15.2■□□□□ 0.023e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-202ENST00000393087 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.073e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-210ENST00000489769 1562 ntTSL 1 (best)14.59□□□□□ -0.073e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-201ENST00000355814 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.693e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-207ENST00000440909 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.723e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.773e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.933e-37■□□□□ 9.8
NIP7Q9Y221 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.542e-6■□□□□ 9.7
NIP7Q9Y221 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC17.38■□□□□ 0.372e-6■□□□□ 9.7
NIP7Q9Y221 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC15.74■□□□□ 0.112e-6■□□□□ 9.7
NIP7Q9Y221 NDRG1-204ENST00000517599 2918 ntTSL 214.08□□□□□ -0.162e-6■□□□□ 9.7
NIP7Q9Y221 NDRG1-201ENST00000323851 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.322e-6■□□□□ 9.7
NIP7Q9Y221 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC12.03□□□□□ -0.482e-6■□□□□ 9.7
NIP7Q9Y221 C4A-255ENST00000483974 465 ntTSL 227.08■■□□□ 1.935e-11■□□□□ 9.7
NIP7Q9Y221 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.27■■□□□ 14e-6■□□□□ 9.7
NIP7Q9Y221 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.924e-6■□□□□ 9.7
NIP7Q9Y221 C4A-258ENST00000496659 567 ntTSL 212.51□□□□□ -0.415e-11■□□□□ 9.7
NIP7Q9Y221 C3-204ENST00000594936 625 ntTSL 220.06■□□□□ 0.83e-30■□□□□ 9.6
NIP7Q9Y221 C3-213ENST00000600744 708 ntTSL 519.48■□□□□ 0.713e-30■□□□□ 9.6
NIP7Q9Y221 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.061e-9■□□□□ 9.6
NIP7Q9Y221 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.341e-9■□□□□ 9.6
NIP7Q9Y221 SLC25A6-202ENST00000475167 900 ntTSL 220.77■□□□□ 0.921e-9■□□□□ 9.6
NIP7Q9Y221 SERINC2-204ENST00000491976 2807 ntTSL 219.4■□□□□ 0.71e-9■□□□□ 9.6
NIP7Q9Y221 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.22■□□□□ 0.671e-9■□□□□ 9.6
NIP7Q9Y221 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.94■□□□□ 0.621e-9■□□□□ 9.6
NIP7Q9Y221 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.05■□□□□ 0.481e-9■□□□□ 9.6
NIP7Q9Y221 SLC25A6-203ENST00000484026 854 ntTSL 517.26■□□□□ 0.351e-9■□□□□ 9.6
NIP7Q9Y221 AAMDC-205ENST00000526164 726 ntTSL 220.73■□□□□ 0.913e-9■□□□□ 9.6
NIP7Q9Y221 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC17.01■□□□□ 0.313e-9■□□□□ 9.6
NIP7Q9Y221 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC16.51■□□□□ 0.233e-9■□□□□ 9.6
NIP7Q9Y221 AAMDC-212ENST00000630098 542 ntTSL 5 BASIC13.94□□□□□ -0.183e-9■□□□□ 9.6
NIP7Q9Y221 AAMDC-201ENST00000304716 619 ntTSL 1 (best) BASIC13.56□□□□□ -0.243e-9■□□□□ 9.6
NIP7Q9Y221 AAMDC-208ENST00000529666 440 ntTSL 38.42□□□□□ -1.063e-9■□□□□ 9.6
NIP7Q9Y221 C3-211ENST00000599668 627 ntTSL 312.07□□□□□ -0.483e-20■□□□□ 9.6
NIP7Q9Y221 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.246e-7■□□□□ 9.6
NIP7Q9Y221 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC16.29■□□□□ 0.26e-7■□□□□ 9.6
NIP7Q9Y221 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.172e-9■□□□□ 9.6
NIP7Q9Y221 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.352e-9■□□□□ 9.6
NIP7Q9Y221 SDF4-205ENST00000465727 2095 ntTSL 221.51■■□□□ 1.032e-9■□□□□ 9.6
NIP7Q9Y221 SDF4-204ENST00000459994 604 ntTSL 520.33■□□□□ 0.852e-9■□□□□ 9.6
NIP7Q9Y221 BCL2L1-205ENST00000422920 1157 ntTSL 233.51■■■□□ 2.952e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC32■■■□□ 2.712e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-205ENST00000593431 582 ntTSL 325.07■■□□□ 1.62e-8■□□□□ 9.5
NIP7Q9Y221 BCL2L1-208ENST00000450273 894 ntTSL 323.96■■□□□ 1.432e-8■□□□□ 9.5
NIP7Q9Y221 BCL2L1-209ENST00000456404 914 ntTSL 223.42■■□□□ 1.342e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC23.21■■□□□ 1.312e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-203ENST00000452439 1351 ntTSL 222.93■■□□□ 1.262e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-214ENST00000598927 1616 ntTSL 522.66■■□□□ 1.222e-8■□□□□ 9.5
NIP7Q9Y221 NDRG1-220ENST00000521664 594 ntTSL 222.39■■□□□ 1.172e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-209ENST00000596147 383 ntTSL 322.31■■□□□ 1.162e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.152e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-215ENST00000598936 870 ntTSL 322.06■■□□□ 1.122e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-208ENST00000595881 2681 ntTSL 221.6■■□□□ 1.052e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.022e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-212ENST00000598319 1888 ntTSL 520.62■□□□□ 0.892e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-206ENST00000594823 819 ntTSL 520.07■□□□□ 0.82e-8■□□□□ 9.5
NIP7Q9Y221 NDRG1-223ENST00000522665 411 ntTSL 218.82■□□□□ 0.62e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-211ENST00000598076 676 ntTSL 317.62■□□□□ 0.412e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-204ENST00000593381 566 ntTSL 416.84■□□□□ 0.292e-8■□□□□ 9.5
NIP7Q9Y221 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.112e-8■□□□□ 9.5
NIP7Q9Y221 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC15.75■□□□□ 0.112e-8■□□□□ 9.5
NIP7Q9Y221 BCL2L1-207ENST00000439267 781 ntTSL 215.65■□□□□ 0.12e-8■□□□□ 9.5
NIP7Q9Y221 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.12e-8■□□□□ 9.5
NIP7Q9Y221 BCL2L1-204ENST00000420488 820 ntTSL 214.03□□□□□ -0.162e-8■□□□□ 9.5
NIP7Q9Y221 BCL2L1-206ENST00000434194 381 ntTSL 39.84□□□□□ -0.832e-8■□□□□ 9.5
NIP7Q9Y221 UBAP2-209ENST00000474372 1339 ntTSL 517.86■□□□□ 0.452e-20■□□□□ 9.5
NIP7Q9Y221 UBAP2-211ENST00000488443 492 ntTSL 517.72■□□□□ 0.432e-20■□□□□ 9.5
NIP7Q9Y221 UBAP2-205ENST00000379239 2513 ntTSL 2 BASIC11.9□□□□□ -0.52e-20■□□□□ 9.5
NIP7Q9Y221 SNORD121B-201ENST00000458838 81 ntBASIC3.02□□□□□ -1.932e-20■□□□□ 9.5
NIP7Q9Y221 NDRG1-203ENST00000517331 584 ntTSL 520.61■□□□□ 0.892e-6■□□□□ 9.5
NIP7Q9Y221 NDRG1-221ENST00000522377 1103 ntTSL 516.59■□□□□ 0.252e-6■□□□□ 9.5
NIP7Q9Y221 NDRG1-207ENST00000518066 560 ntTSL 5 BASIC15.17■□□□□ 0.022e-6■□□□□ 9.5
NIP7Q9Y221 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.214e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-225ENST00000522890 581 ntTSL 521.28■■□□□ 14e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-210ENST00000518480 558 ntTSL 420.03■□□□□ 0.84e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-211ENST00000519228 729 ntTSL 419.99■□□□□ 0.794e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-205ENST00000517745 391 ntTSL 318.94■□□□□ 0.624e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-214ENST00000520230 582 ntTSL 417.71■□□□□ 0.434e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-213ENST00000519580 550 ntTSL 517.18■□□□□ 0.344e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-219ENST00000521544 709 ntTSL 517.18■□□□□ 0.344e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-206ENST00000518010 581 ntTSL 416.86■□□□□ 0.294e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-224ENST00000522738 530 ntTSL 515.21■□□□□ 0.034e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-215ENST00000520943 536 ntTSL 413.32□□□□□ -0.284e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-208ENST00000518094 347 ntTSL 210.98□□□□□ -0.654e-6■□□□□ 9.4
NIP7Q9Y221 HSPA8-208ENST00000526686 740 ntTSL 1 (best)3.23□□□□□ -1.897e-26■□□□□ 9.4
NIP7Q9Y221 SNORD14D-201ENST00000384390 87 ntBASIC1.8□□□□□ -2.127e-26■□□□□ 9.4
NIP7Q9Y221 A2M-205ENST00000472360 692 ntTSL 29.85□□□□□ -0.836e-16■□□□□ 9.4
NIP7Q9Y221 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC18.78■□□□□ 0.62e-12■□□□□ 9.3
NIP7Q9Y221 EEF2-204ENST00000598182 581 ntTSL 217.72■□□□□ 0.431e-6■□□□□ 9.3
NIP7Q9Y221 SNORD116-6-201ENST00000384711 96 ntBASIC2.9□□□□□ -1.952e-12■□□□□ 9.3
NIP7Q9Y221 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC24.61■■□□□ 1.533e-26■□□□□ 9.3
NIP7Q9Y221 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.933e-26■□□□□ 9.3
NIP7Q9Y221 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC17.27■□□□□ 0.363e-26■□□□□ 9.3
NIP7Q9Y221 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC15.42■□□□□ 0.063e-26■□□□□ 9.3
NIP7Q9Y221 HSPA8-203ENST00000524552 963 ntTSL 1 (best)15.19■□□□□ 0.023e-26■□□□□ 9.3
NIP7Q9Y221 HSPA8-207ENST00000526110 1924 ntTSL 5 BASIC14.64□□□□□ -0.073e-26■□□□□ 9.3
Retrieved 100 of 1,619 protein–RNA pairs in 104 ms