Protein–RNA interactions for Protein: Q9Y221

NIP7, 60S ribosome subunit biogenesis protein NIP7 homolog, humanhuman

Known RBP eCLIP

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7Q9Y221 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.363e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.193e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.193e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-203ENST00000393088 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.053e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-204ENST00000402629 1450 ntTSL 1 (best) BASIC15.2■□□□□ 0.023e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-202ENST00000393087 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.073e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-210ENST00000489769 1562 ntTSL 1 (best)14.59□□□□□ -0.073e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-201ENST00000355814 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.693e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-207ENST00000440909 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.723e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.773e-37■□□□□ 9.8
NIP7Q9Y221 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.933e-37■□□□□ 9.8
NIP7Q9Y221 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.542e-6■□□□□ 9.7
NIP7Q9Y221 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC17.38■□□□□ 0.372e-6■□□□□ 9.7
NIP7Q9Y221 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC15.74■□□□□ 0.112e-6■□□□□ 9.7
NIP7Q9Y221 NDRG1-204ENST00000517599 2918 ntTSL 214.08□□□□□ -0.162e-6■□□□□ 9.7
NIP7Q9Y221 NDRG1-201ENST00000323851 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.322e-6■□□□□ 9.7
NIP7Q9Y221 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC12.03□□□□□ -0.482e-6■□□□□ 9.7
NIP7Q9Y221 C4A-255ENST00000483974 465 ntTSL 227.08■■□□□ 1.935e-11■□□□□ 9.7
NIP7Q9Y221 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.27■■□□□ 14e-6■□□□□ 9.7
NIP7Q9Y221 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.924e-6■□□□□ 9.7
NIP7Q9Y221 C4A-258ENST00000496659 567 ntTSL 212.51□□□□□ -0.415e-11■□□□□ 9.7
NIP7Q9Y221 C3-204ENST00000594936 625 ntTSL 220.06■□□□□ 0.83e-30■□□□□ 9.6
NIP7Q9Y221 C3-213ENST00000600744 708 ntTSL 519.48■□□□□ 0.713e-30■□□□□ 9.6
NIP7Q9Y221 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.061e-9■□□□□ 9.6
NIP7Q9Y221 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.341e-9■□□□□ 9.6
NIP7Q9Y221 SLC25A6-202ENST00000475167 900 ntTSL 220.77■□□□□ 0.921e-9■□□□□ 9.6
NIP7Q9Y221 SERINC2-204ENST00000491976 2807 ntTSL 219.4■□□□□ 0.71e-9■□□□□ 9.6
NIP7Q9Y221 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.22■□□□□ 0.671e-9■□□□□ 9.6
NIP7Q9Y221 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.94■□□□□ 0.621e-9■□□□□ 9.6
NIP7Q9Y221 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.05■□□□□ 0.481e-9■□□□□ 9.6
NIP7Q9Y221 SLC25A6-203ENST00000484026 854 ntTSL 517.26■□□□□ 0.351e-9■□□□□ 9.6
NIP7Q9Y221 AAMDC-205ENST00000526164 726 ntTSL 220.73■□□□□ 0.913e-9■□□□□ 9.6
NIP7Q9Y221 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC17.01■□□□□ 0.313e-9■□□□□ 9.6
NIP7Q9Y221 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC16.51■□□□□ 0.233e-9■□□□□ 9.6
NIP7Q9Y221 AAMDC-212ENST00000630098 542 ntTSL 5 BASIC13.94□□□□□ -0.183e-9■□□□□ 9.6
NIP7Q9Y221 AAMDC-201ENST00000304716 619 ntTSL 1 (best) BASIC13.56□□□□□ -0.243e-9■□□□□ 9.6
NIP7Q9Y221 AAMDC-208ENST00000529666 440 ntTSL 38.42□□□□□ -1.063e-9■□□□□ 9.6
NIP7Q9Y221 C3-211ENST00000599668 627 ntTSL 312.07□□□□□ -0.483e-20■□□□□ 9.6
NIP7Q9Y221 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.246e-7■□□□□ 9.6
NIP7Q9Y221 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC16.29■□□□□ 0.26e-7■□□□□ 9.6
NIP7Q9Y221 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.172e-9■□□□□ 9.6
NIP7Q9Y221 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.352e-9■□□□□ 9.6
NIP7Q9Y221 SDF4-205ENST00000465727 2095 ntTSL 221.51■■□□□ 1.032e-9■□□□□ 9.6
NIP7Q9Y221 SDF4-204ENST00000459994 604 ntTSL 520.33■□□□□ 0.852e-9■□□□□ 9.6
NIP7Q9Y221 BCL2L1-205ENST00000422920 1157 ntTSL 233.51■■■□□ 2.952e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC32■■■□□ 2.712e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-205ENST00000593431 582 ntTSL 325.07■■□□□ 1.62e-8■□□□□ 9.5
NIP7Q9Y221 BCL2L1-208ENST00000450273 894 ntTSL 323.96■■□□□ 1.432e-8■□□□□ 9.5
NIP7Q9Y221 BCL2L1-209ENST00000456404 914 ntTSL 223.42■■□□□ 1.342e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC23.21■■□□□ 1.312e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-203ENST00000452439 1351 ntTSL 222.93■■□□□ 1.262e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-214ENST00000598927 1616 ntTSL 522.66■■□□□ 1.222e-8■□□□□ 9.5
NIP7Q9Y221 NDRG1-220ENST00000521664 594 ntTSL 222.39■■□□□ 1.172e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-209ENST00000596147 383 ntTSL 322.31■■□□□ 1.162e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.152e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-215ENST00000598936 870 ntTSL 322.06■■□□□ 1.122e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-208ENST00000595881 2681 ntTSL 221.6■■□□□ 1.052e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.022e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-212ENST00000598319 1888 ntTSL 520.62■□□□□ 0.892e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-206ENST00000594823 819 ntTSL 520.07■□□□□ 0.82e-8■□□□□ 9.5
NIP7Q9Y221 NDRG1-223ENST00000522665 411 ntTSL 218.82■□□□□ 0.62e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-211ENST00000598076 676 ntTSL 317.62■□□□□ 0.412e-8■□□□□ 9.5
NIP7Q9Y221 FCGRT-204ENST00000593381 566 ntTSL 416.84■□□□□ 0.292e-8■□□□□ 9.5
NIP7Q9Y221 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.112e-8■□□□□ 9.5
NIP7Q9Y221 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC15.75■□□□□ 0.112e-8■□□□□ 9.5
NIP7Q9Y221 BCL2L1-207ENST00000439267 781 ntTSL 215.65■□□□□ 0.12e-8■□□□□ 9.5
NIP7Q9Y221 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.12e-8■□□□□ 9.5
NIP7Q9Y221 BCL2L1-204ENST00000420488 820 ntTSL 214.03□□□□□ -0.162e-8■□□□□ 9.5
NIP7Q9Y221 BCL2L1-206ENST00000434194 381 ntTSL 39.84□□□□□ -0.832e-8■□□□□ 9.5
NIP7Q9Y221 UBAP2-209ENST00000474372 1339 ntTSL 517.86■□□□□ 0.452e-20■□□□□ 9.5
NIP7Q9Y221 UBAP2-211ENST00000488443 492 ntTSL 517.72■□□□□ 0.432e-20■□□□□ 9.5
NIP7Q9Y221 UBAP2-205ENST00000379239 2513 ntTSL 2 BASIC11.9□□□□□ -0.52e-20■□□□□ 9.5
NIP7Q9Y221 SNORD121B-201ENST00000458838 81 ntBASIC3.02□□□□□ -1.932e-20■□□□□ 9.5
NIP7Q9Y221 NDRG1-203ENST00000517331 584 ntTSL 520.61■□□□□ 0.892e-6■□□□□ 9.5
NIP7Q9Y221 NDRG1-221ENST00000522377 1103 ntTSL 516.59■□□□□ 0.252e-6■□□□□ 9.5
NIP7Q9Y221 NDRG1-207ENST00000518066 560 ntTSL 5 BASIC15.17■□□□□ 0.022e-6■□□□□ 9.5
NIP7Q9Y221 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.214e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-225ENST00000522890 581 ntTSL 521.28■■□□□ 14e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-210ENST00000518480 558 ntTSL 420.03■□□□□ 0.84e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-211ENST00000519228 729 ntTSL 419.99■□□□□ 0.794e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-205ENST00000517745 391 ntTSL 318.94■□□□□ 0.624e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-214ENST00000520230 582 ntTSL 417.71■□□□□ 0.434e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-213ENST00000519580 550 ntTSL 517.18■□□□□ 0.344e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-219ENST00000521544 709 ntTSL 517.18■□□□□ 0.344e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-206ENST00000518010 581 ntTSL 416.86■□□□□ 0.294e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-224ENST00000522738 530 ntTSL 515.21■□□□□ 0.034e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-215ENST00000520943 536 ntTSL 413.32□□□□□ -0.284e-6■□□□□ 9.4
NIP7Q9Y221 NDRG1-208ENST00000518094 347 ntTSL 210.98□□□□□ -0.654e-6■□□□□ 9.4
NIP7Q9Y221 HSPA8-208ENST00000526686 740 ntTSL 1 (best)3.23□□□□□ -1.897e-26■□□□□ 9.4
NIP7Q9Y221 SNORD14D-201ENST00000384390 87 ntBASIC1.8□□□□□ -2.127e-26■□□□□ 9.4
NIP7Q9Y221 A2M-205ENST00000472360 692 ntTSL 29.85□□□□□ -0.836e-16■□□□□ 9.4
NIP7Q9Y221 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC18.78■□□□□ 0.62e-12■□□□□ 9.3
NIP7Q9Y221 EEF2-204ENST00000598182 581 ntTSL 217.72■□□□□ 0.431e-6■□□□□ 9.3
NIP7Q9Y221 SNORD116-6-201ENST00000384711 96 ntBASIC2.9□□□□□ -1.952e-12■□□□□ 9.3
NIP7Q9Y221 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC24.61■■□□□ 1.533e-26■□□□□ 9.3
NIP7Q9Y221 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.933e-26■□□□□ 9.3
NIP7Q9Y221 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC17.27■□□□□ 0.363e-26■□□□□ 9.3
NIP7Q9Y221 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC15.42■□□□□ 0.063e-26■□□□□ 9.3
NIP7Q9Y221 HSPA8-203ENST00000524552 963 ntTSL 1 (best)15.19■□□□□ 0.023e-26■□□□□ 9.3
NIP7Q9Y221 HSPA8-207ENST00000526110 1924 ntTSL 5 BASIC14.64□□□□□ -0.073e-26■□□□□ 9.3
Retrieved 100 of 1,619 protein–RNA pairs in 79.9 ms