RNA–Protein interactions for RNA: ENST00000402629.1

SERPINA1-204, Transcript of serpin family A member 1, humanhuman

TSL 1 (best) BASIC

Gene SERPINA1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA1-204ENST00000402629 NISCHQ9Y2I1 1504 aa28.26■■■□□ 2.11
SERPINA1-204ENST00000402629 CCDC180Q9P1Z9 1646 aa25.09■■□□□ 1.61
SERPINA1-204ENST00000402629 ABCC9O60706 1549 aa24.53■■□□□ 1.52
SERPINA1-204ENST00000402629 DCAF8L2P0C7V8 631 aa23.77■■□□□ 1.4
SERPINA1-204ENST00000402629 RB1CC1Q8TDY2 1594 aa23.66■■□□□ 1.38
SERPINA1-204ENST00000402629 NACADO15069 1562 aa23.63■■□□□ 1.37
SERPINA1-204ENST00000402629 ZCCHC6Q5VYS8 1495 aaKnown RBP23.52■■□□□ 1.36
SERPINA1-204ENST00000402629 MYO15BQ96JP2 1530 aa23.48■■□□□ 1.35
SERPINA1-204ENST00000402629 DCAF1Q9Y4B6 1507 aa23.39■■□□□ 1.34
SERPINA1-204ENST00000402629 UNC13AQ9UPW8 1703 aa22.97■■□□□ 1.27
SERPINA1-204ENST00000402629 PABPN1Q86U42 306 aaKnown RBP eCLIP22.96■■□□□ 1.27
SERPINA1-204ENST00000402629 SCRIBQ14160 1630 aa22.9■■□□□ 1.26
SERPINA1-204ENST00000402629 BICRAQ9NZM4 1560 aa22.81■■□□□ 1.24
SERPINA1-204ENST00000402629 SHROOM4Q9ULL8 1493 aa22.71■■□□□ 1.23
SERPINA1-204ENST00000402629 DNAJC5BQ9UF47 199 aa22.4■■□□□ 1.18
SERPINA1-204ENST00000402629 EIF4G1Q04637 1599 aaKnown RBP22.27■■□□□ 1.16
SERPINA1-204ENST00000402629 CC2D2AQ9P2K1 1620 aa22.16■■□□□ 1.14
SERPINA1-204ENST00000402629 CECR2Q9BXF3 1484 aa22.06■■□□□ 1.12
SERPINA1-204ENST00000402629 BAZ1AQ9NRL2 1556 aaPredicted RBP21.94■■□□□ 1.1
SERPINA1-204ENST00000402629 SMARCA4P51532 1647 aa21.9■■□□□ 1.1
SERPINA1-204ENST00000402629 SMARCA2P51531 1590 aa21.82■■□□□ 1.08
SERPINA1-204ENST00000402629 NCAPD3P42695 1498 aa21.79■■□□□ 1.08
SERPINA1-204ENST00000402629 ATAD2BQ9ULI0 1458 aa21.79■■□□□ 1.08
SERPINA1-204ENST00000402629 MROH2BQ7Z745 1585 aa21.74■■□□□ 1.07
SERPINA1-204ENST00000402629 HMGXB3Q12766 1538 aa21.67■■□□□ 1.06
SERPINA1-204ENST00000402629 PEG3Q9GZU2 1588 aa21.67■■□□□ 1.06
SERPINA1-204ENST00000402629 BAZ1BQ9UIG0 1483 aaKnown RBP21.66■■□□□ 1.06
SERPINA1-204ENST00000402629 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
SERPINA1-204ENST00000402629 WIZO95785 1651 aa21.51■■□□□ 1.03
SERPINA1-204ENST00000402629 TOP2AP11388 1531 aaKnown RBP21.33■■□□□ 1
SERPINA1-204ENST00000402629 ERCC6Q03468 1493 aa21.24■□□□□ 0.99
SERPINA1-204ENST00000402629 LAMC3Q9Y6N6 1575 aa21.22■□□□□ 0.99
SERPINA1-204ENST00000402629 CADPSQ9ULU8 1353 aa21.19■□□□□ 0.98
SERPINA1-204ENST00000402629 NESP48681 1621 aa21.19■□□□□ 0.98
SERPINA1-204ENST00000402629 SUPT5HO00267 1087 aaKnown RBP21.16■□□□□ 0.98
SERPINA1-204ENST00000402629 PDS5BQ9NTI5 1447 aa21.15■□□□□ 0.98
SERPINA1-204ENST00000402629 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
SERPINA1-204ENST00000402629 CFTRP13569 1480 aa21.03■□□□□ 0.96
SERPINA1-204ENST00000402629 CUX2O14529 1486 aa20.94■□□□□ 0.94
SERPINA1-204ENST00000402629 KIF21AQ7Z4S6 1674 aa20.93■□□□□ 0.94
SERPINA1-204ENST00000402629 FANCD2Q9BXW9 1451 aa20.93■□□□□ 0.94
SERPINA1-204ENST00000402629 CEP164Q9UPV0 1460 aa20.92■□□□□ 0.94
SERPINA1-204ENST00000402629 MRC2Q9UBG0 1479 aa20.86■□□□□ 0.93
SERPINA1-204ENST00000402629 THOC2Q8NI27 1593 aaKnown RBP20.84■□□□□ 0.93
SERPINA1-204ENST00000402629 PRDM2Q13029 1718 aa20.83■□□□□ 0.93
SERPINA1-204ENST00000402629 WDR62O43379 1518 aa20.74■□□□□ 0.91
SERPINA1-204ENST00000402629 ABCC8Q09428 1581 aa20.67■□□□□ 0.9
SERPINA1-204ENST00000402629 URB2Q14146 1524 aaKnown RBP20.65■□□□□ 0.9
SERPINA1-204ENST00000402629 TOPBP1Q92547 1522 aa20.57■□□□□ 0.88
SERPINA1-204ENST00000402629 DNMBPQ6XZF7 1577 aa20.56■□□□□ 0.88
SERPINA1-204ENST00000402629 IFT140Q96RY7 1462 aa20.48■□□□□ 0.87
SERPINA1-204ENST00000402629 CUX1P39880 1505 aa20.39■□□□□ 0.86
SERPINA1-204ENST00000402629 POLA1P09884 1462 aaPredicted RBP20.39■□□□□ 0.85
SERPINA1-204ENST00000402629 SOGA1O94964 1423 aa20.38■□□□□ 0.85
SERPINA1-204ENST00000402629 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
SERPINA1-204ENST00000402629 FGD5Q6ZNL6 1462 aa20.36■□□□□ 0.85
SERPINA1-204ENST00000402629 RAD54L2Q9Y4B4 1467 aa20.3■□□□□ 0.84
SERPINA1-204ENST00000402629 ZNF608Q9ULD9 1512 aaPredicted RBP20.29■□□□□ 0.84
SERPINA1-204ENST00000402629 TARBP1Q13395 1621 aaKnown RBP20.29■□□□□ 0.84
SERPINA1-204ENST00000402629 TOP2BQ02880 1626 aa20.27■□□□□ 0.84
SERPINA1-204ENST00000402629 DNAJC5Q9H3Z4 198 aa20.25■□□□□ 0.83
SERPINA1-204ENST00000402629 AQRO60306 1485 aaKnown RBP eCLIP20.24■□□□□ 0.831e-14■■■■□ 19.6
SERPINA1-204ENST00000402629 BIVM-ERCC5R4GMW8 1640 aa20.24■□□□□ 0.83
SERPINA1-204ENST00000402629 TDRD9Q8NDG6 1382 aaKnown RBP20.23■□□□□ 0.83
SERPINA1-204ENST00000402629 EIF4G3O43432 1585 aaKnown RBP20.23■□□□□ 0.83
SERPINA1-204ENST00000402629 WDR97A6NE52 1622 aa20.22■□□□□ 0.83
SERPINA1-204ENST00000402629 SYNJ1O43426 1573 aa20.22■□□□□ 0.83
SERPINA1-204ENST00000402629 ABCA10Q8WWZ4 1543 aa20.18■□□□□ 0.82
SERPINA1-204ENST00000402629 OSCARQ8IYS5 282 aa20.17■□□□□ 0.82
SERPINA1-204ENST00000402629 GRIN2BQ13224 1484 aa20.13■□□□□ 0.81
SERPINA1-204ENST00000402629 GAPVD1Q14C86 1478 aa20.13■□□□□ 0.81
SERPINA1-204ENST00000402629 FBLN2P98095 1184 aa20.11■□□□□ 0.81
SERPINA1-204ENST00000402629 CHMP7Q8WUX9 453 aaPredicted RBP20.07■□□□□ 0.8
SERPINA1-204ENST00000402629 MAGI1Q96QZ7 1491 aaPredicted RBP20.06■□□□□ 0.8
SERPINA1-204ENST00000402629 SNAPC4Q5SXM2 1469 aa20.05■□□□□ 0.8
SERPINA1-204ENST00000402629 ABCA5Q8WWZ7 1642 aa20.03■□□□□ 0.8
SERPINA1-204ENST00000402629 TRIM41Q8WV44 630 aa20.02■□□□□ 0.8
SERPINA1-204ENST00000402629 PBRM1Q86U86 1689 aa20.02■□□□□ 0.79
SERPINA1-204ENST00000402629 KIF27Q86VH2 1401 aa19.99■□□□□ 0.79
SERPINA1-204ENST00000402629 SYNJ2O15056 1496 aa19.98■□□□□ 0.79
SERPINA1-204ENST00000402629 ERICH3Q5RHP9 1530 aa19.95■□□□□ 0.78
SERPINA1-204ENST00000402629 CHD1O14646 1710 aa19.95■□□□□ 0.78
SERPINA1-204ENST00000402629 FHAD1B1AJZ9 1412 aa19.91■□□□□ 0.78
SERPINA1-204ENST00000402629 ADAMTS12P58397 1594 aa19.86■□□□□ 0.77
SERPINA1-204ENST00000402629 GRIN2AQ12879 1464 aa19.84■□□□□ 0.77
SERPINA1-204ENST00000402629 IGF1RP08069 1367 aa19.83■□□□□ 0.77
SERPINA1-204ENST00000402629 CUL7Q14999 1698 aa19.78■□□□□ 0.76
SERPINA1-204ENST00000402629 CARMIL1Q5VZK9 1371 aa19.77■□□□□ 0.75
SERPINA1-204ENST00000402629 CLASP1Q7Z460 1538 aa19.73■□□□□ 0.75
SERPINA1-204ENST00000402629 NUP160Q12769 1436 aa19.72■□□□□ 0.75
SERPINA1-204ENST00000402629 ARHGEF11O15085 1522 aa19.72■□□□□ 0.75
SERPINA1-204ENST00000402629 CHIC1Q5VXU3 224 aa19.71■□□□□ 0.75
SERPINA1-204ENST00000402629 RIMBP3CA6NJZ7 1639 aa19.69■□□□□ 0.74
SERPINA1-204ENST00000402629 RIMBP3BA6NNM3 1639 aa19.69■□□□□ 0.74
SERPINA1-204ENST00000402629 RIMBP3Q9UFD9 1639 aa19.69■□□□□ 0.74
SERPINA1-204ENST00000402629 CEP170Q5SW79 1584 aa19.68■□□□□ 0.74
SERPINA1-204ENST00000402629 RUSC2Q8N2Y8 1516 aa19.67■□□□□ 0.74
SERPINA1-204ENST00000402629 EEA1Q15075 1411 aa19.65■□□□□ 0.74
SERPINA1-204ENST00000402629 RAPGEF2Q9Y4G8 1499 aa19.64■□□□□ 0.74
SERPINA1-204ENST00000402629 CYB5RLQ6IPT4 315 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms