RNA–Protein interactions for RNA: ENST00000474372.1

UBAP2-209, Transcript of ubiquitin associated protein 2, humanhuman

TSL 5

Gene UBAP2, Length 1,339 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-209ENST00000474372 NISCHQ9Y2I1 1504 aa33.48■■■□□ 2.95
UBAP2-209ENST00000474372 CCDC180Q9P1Z9 1646 aa29.53■■■□□ 2.32
UBAP2-209ENST00000474372 ABCC9O60706 1549 aa28.64■■■□□ 2.18
UBAP2-209ENST00000474372 ZCCHC6Q5VYS8 1495 aaKnown RBP27.97■■■□□ 2.07
UBAP2-209ENST00000474372 DCAF8L2P0C7V8 631 aa27.83■■■□□ 2.05
UBAP2-209ENST00000474372 NACADO15069 1562 aa27.69■■■□□ 2.02
UBAP2-209ENST00000474372 DCAF1Q9Y4B6 1507 aa27.68■■■□□ 2.02
UBAP2-209ENST00000474372 MYO15BQ96JP2 1530 aa27.65■■■□□ 2.02
UBAP2-209ENST00000474372 RB1CC1Q8TDY2 1594 aa27.63■■■□□ 2.01
UBAP2-209ENST00000474372 SCRIBQ14160 1630 aa27.05■■□□□ 1.92
UBAP2-209ENST00000474372 UNC13AQ9UPW8 1703 aa27.03■■□□□ 1.92
UBAP2-209ENST00000474372 PABPN1Q86U42 306 aaKnown RBP eCLIP26.87■■□□□ 1.89
UBAP2-209ENST00000474372 BICRAQ9NZM4 1560 aa26.86■■□□□ 1.89
UBAP2-209ENST00000474372 SHROOM4Q9ULL8 1493 aa26.73■■□□□ 1.87
UBAP2-209ENST00000474372 CECR2Q9BXF3 1484 aa26.1■■□□□ 1.77
UBAP2-209ENST00000474372 EIF4G1Q04637 1599 aaKnown RBP26.09■■□□□ 1.77
UBAP2-209ENST00000474372 DNAJC5BQ9UF47 199 aa26.03■■□□□ 1.76
UBAP2-209ENST00000474372 SMARCA4P51532 1647 aa25.89■■□□□ 1.73
UBAP2-209ENST00000474372 CC2D2AQ9P2K1 1620 aa25.89■■□□□ 1.73
UBAP2-209ENST00000474372 BAZ1AQ9NRL2 1556 aaPredicted RBP25.89■■□□□ 1.73
UBAP2-209ENST00000474372 MROH2BQ7Z745 1585 aa25.85■■□□□ 1.73
UBAP2-209ENST00000474372 RSF1Q96T23 1441 aaPredicted RBP25.68■■□□□ 1.7
UBAP2-209ENST00000474372 ATAD2BQ9ULI0 1458 aa25.68■■□□□ 1.7
UBAP2-209ENST00000474372 PEG3Q9GZU2 1588 aa25.61■■□□□ 1.69
UBAP2-209ENST00000474372 SMARCA2P51531 1590 aa25.6■■□□□ 1.69
UBAP2-209ENST00000474372 NCAPD3P42695 1498 aa25.59■■□□□ 1.69
UBAP2-209ENST00000474372 WIZO95785 1651 aa25.56■■□□□ 1.68
UBAP2-209ENST00000474372 HMGXB3Q12766 1538 aa25.47■■□□□ 1.67
UBAP2-209ENST00000474372 BAZ1BQ9UIG0 1483 aaKnown RBP25.46■■□□□ 1.67
UBAP2-209ENST00000474372 SUPT5HO00267 1087 aaKnown RBP25.31■■□□□ 1.64
UBAP2-209ENST00000474372 TOP2AP11388 1531 aaKnown RBP25.29■■□□□ 1.64
UBAP2-209ENST00000474372 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
UBAP2-209ENST00000474372 NESP48681 1621 aa24.92■■□□□ 1.58
UBAP2-209ENST00000474372 CADPSQ9ULU8 1353 aa24.87■■□□□ 1.57
UBAP2-209ENST00000474372 LAMC3Q9Y6N6 1575 aa24.81■■□□□ 1.56
UBAP2-209ENST00000474372 CFTRP13569 1480 aa24.8■■□□□ 1.56
UBAP2-209ENST00000474372 PDS5BQ9NTI5 1447 aa24.64■■□□□ 1.54
UBAP2-209ENST00000474372 ERCC6Q03468 1493 aa24.6■■□□□ 1.53
UBAP2-209ENST00000474372 FANCD2Q9BXW9 1451 aa24.58■■□□□ 1.53
UBAP2-209ENST00000474372 KIF21AQ7Z4S6 1674 aa24.57■■□□□ 1.52
UBAP2-209ENST00000474372 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
UBAP2-209ENST00000474372 CEP164Q9UPV0 1460 aa24.5■■□□□ 1.51
UBAP2-209ENST00000474372 THOC2Q8NI27 1593 aaKnown RBP24.41■■□□□ 1.5
UBAP2-209ENST00000474372 MRC2Q9UBG0 1479 aa24.4■■□□□ 1.5
UBAP2-209ENST00000474372 URB2Q14146 1524 aaKnown RBP24.35■■□□□ 1.49
UBAP2-209ENST00000474372 WDR62O43379 1518 aa24.3■■□□□ 1.48
UBAP2-209ENST00000474372 TOPBP1Q92547 1522 aa24.24■■□□□ 1.47
UBAP2-209ENST00000474372 ABCC8Q09428 1581 aa24.23■■□□□ 1.47
UBAP2-209ENST00000474372 DNMBPQ6XZF7 1577 aa24.22■■□□□ 1.47
UBAP2-209ENST00000474372 CUX1P39880 1505 aa24.22■■□□□ 1.47
UBAP2-209ENST00000474372 CUX2O14529 1486 aa24.2■■□□□ 1.46
UBAP2-209ENST00000474372 WRNQ14191 1432 aaPredicted RBP eCLIP24.17■■□□□ 1.46
UBAP2-209ENST00000474372 SYNJ1O43426 1573 aa24.12■■□□□ 1.45
UBAP2-209ENST00000474372 POLA1P09884 1462 aaPredicted RBP24.07■■□□□ 1.44
UBAP2-209ENST00000474372 FGD5Q6ZNL6 1462 aa24.06■■□□□ 1.44
UBAP2-209ENST00000474372 TOP2BQ02880 1626 aa24.06■■□□□ 1.44
UBAP2-209ENST00000474372 BIVM-ERCC5R4GMW8 1640 aa24.05■■□□□ 1.44
UBAP2-209ENST00000474372 RAD54L2Q9Y4B4 1467 aa23.99■■□□□ 1.43
UBAP2-209ENST00000474372 IFT140Q96RY7 1462 aa23.97■■□□□ 1.43
UBAP2-209ENST00000474372 SOGA1O94964 1423 aa23.95■■□□□ 1.42
UBAP2-209ENST00000474372 TARBP1Q13395 1621 aaKnown RBP23.94■■□□□ 1.42
UBAP2-209ENST00000474372 ZNF608Q9ULD9 1512 aaPredicted RBP23.89■■□□□ 1.42
UBAP2-209ENST00000474372 CHIC1Q5VXU3 224 aa23.85■■□□□ 1.41
UBAP2-209ENST00000474372 TRIM41Q8WV44 630 aa23.84■■□□□ 1.41
UBAP2-209ENST00000474372 ABCA10Q8WWZ4 1543 aa23.83■■□□□ 1.41
UBAP2-209ENST00000474372 TDRD9Q8NDG6 1382 aaKnown RBP23.82■■□□□ 1.4
UBAP2-209ENST00000474372 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
UBAP2-209ENST00000474372 AQRO60306 1485 aaKnown RBP eCLIP23.8■■□□□ 1.42e-6■■■□□ 16.3
UBAP2-209ENST00000474372 EIF4G3O43432 1585 aaKnown RBP23.77■■□□□ 1.4
UBAP2-209ENST00000474372 ABCA5Q8WWZ7 1642 aa23.7■■□□□ 1.38
UBAP2-209ENST00000474372 GAPVD1Q14C86 1478 aa23.68■■□□□ 1.38
UBAP2-209ENST00000474372 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
UBAP2-209ENST00000474372 KIF27Q86VH2 1401 aa23.62■■□□□ 1.37
UBAP2-209ENST00000474372 RUSC2Q8N2Y8 1516 aa23.6■■□□□ 1.37
UBAP2-209ENST00000474372 PBRM1Q86U86 1689 aa23.57■■□□□ 1.36
UBAP2-209ENST00000474372 SNAPC4Q5SXM2 1469 aa23.56■■□□□ 1.36
UBAP2-209ENST00000474372 ERICH3Q5RHP9 1530 aa23.52■■□□□ 1.36
UBAP2-209ENST00000474372 IGF1RP08069 1367 aa23.52■■□□□ 1.36
UBAP2-209ENST00000474372 MAGI1Q96QZ7 1491 aaPredicted RBP23.51■■□□□ 1.35
UBAP2-209ENST00000474372 ADAMTS12P58397 1594 aa23.45■■□□□ 1.34
UBAP2-209ENST00000474372 SYNJ2O15056 1496 aa23.42■■□□□ 1.34
UBAP2-209ENST00000474372 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
UBAP2-209ENST00000474372 FBLN2P98095 1184 aa23.41■■□□□ 1.34
UBAP2-209ENST00000474372 FAM9AQ8IZU1 332 aaPredicted RBP23.4■■□□□ 1.34
UBAP2-209ENST00000474372 CHMP7Q8WUX9 453 aaPredicted RBP23.38■■□□□ 1.33
UBAP2-209ENST00000474372 CHD1O14646 1710 aa23.38■■□□□ 1.33
UBAP2-209ENST00000474372 EEA1Q15075 1411 aa23.38■■□□□ 1.33
UBAP2-209ENST00000474372 CARMIL1Q5VZK9 1371 aa23.37■■□□□ 1.33
UBAP2-209ENST00000474372 CUL7Q14999 1698 aa23.35■■□□□ 1.33
UBAP2-209ENST00000474372 CSRNP3Q8WYN3 585 aa23.34■■□□□ 1.33
UBAP2-209ENST00000474372 GRIN2AQ12879 1464 aa23.33■■□□□ 1.33
UBAP2-209ENST00000474372 PRXQ9BXM0 1461 aa23.29■■□□□ 1.32
UBAP2-209ENST00000474372 OSCARQ8IYS5 282 aa23.29■■□□□ 1.32
UBAP2-209ENST00000474372 RAPGEF2Q9Y4G8 1499 aa23.25■■□□□ 1.31
UBAP2-209ENST00000474372 NUP160Q12769 1436 aa23.23■■□□□ 1.31
UBAP2-209ENST00000474372 CEP170Q5SW79 1584 aa23.22■■□□□ 1.31
UBAP2-209ENST00000474372 CLASP1Q7Z460 1538 aa23.16■■□□□ 1.3
UBAP2-209ENST00000474372 DNAJC5Q9H3Z4 198 aa23.16■■□□□ 1.3
UBAP2-209ENST00000474372 KIF21BO75037 1637 aa23.13■■□□□ 1.29
UBAP2-209ENST00000474372 EHMT2Q96KQ7 1210 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms