Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.332e-6■■□□□ 12.9
EIF3DO15371 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC12.15□□□□□ -0.462e-6■■□□□ 12.9
EIF3DO15371 NPIPB4-222ENST00000614197 1216 ntTSL 5 BASIC11.82□□□□□ -0.522e-6■■□□□ 12.9
EIF3DO15371 PTPRM-203ENST00000400060 5030 ntTSL 5 BASIC10.35□□□□□ -0.752e-6■■□□□ 12.9
EIF3DO15371 NPIPB4-211ENST00000539318 695 ntTSL 59.8□□□□□ -0.842e-6■■□□□ 12.9
EIF3DO15371 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.882e-6■■□□□ 12.9
EIF3DO15371 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.882e-6■■□□□ 12.9
EIF3DO15371 DYNC1H1-203ENST00000554854 721 ntTSL 39.06□□□□□ -0.962e-6■■□□□ 12.9
EIF3DO15371 NPIPB4-213ENST00000541329 432 ntTSL 58.32□□□□□ -1.082e-6■■□□□ 12.9
EIF3DO15371 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.122e-6■■□□□ 12.9
EIF3DO15371 NPIPB4-215ENST00000542133 910 ntTSL 37.8□□□□□ -1.162e-6■■□□□ 12.9
EIF3DO15371 NPIPB4-202ENST00000341400 767 ntTSL 26.26□□□□□ -1.412e-6■■□□□ 12.9
EIF3DO15371 NPIPB4-204ENST00000518761 576 ntTSL 33.45□□□□□ -1.862e-6■■□□□ 12.9
EIF3DO15371 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.237e-7■■□□□ 12.8
EIF3DO15371 SEPT9-227ENST00000590059 670 ntTSL 522.97■■□□□ 1.271e-6■■□□□ 12.8
EIF3DO15371 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.441e-6■■□□□ 12.8
EIF3DO15371 ATP11A-209ENST00000466946 431 ntTSL 58.18□□□□□ -1.11e-6■■□□□ 12.8
EIF3DO15371 EIF4G1-224ENST00000444861 2384 ntTSL 1 (best)23.52■■□□□ 1.364e-8■■□□□ 12.8
EIF3DO15371 STAT1-207ENST00000424722 736 ntTSL 318.02■□□□□ 0.482e-7■■□□□ 12.8
EIF3DO15371 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.342e-7■■□□□ 12.8
EIF3DO15371 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.242e-7■■□□□ 12.8
EIF3DO15371 STAT1-210ENST00000454414 572 ntTSL 416.19■□□□□ 0.182e-7■■□□□ 12.8
EIF3DO15371 STAT1-209ENST00000452281 2594 ntTSL 1 (best)16.13■□□□□ 0.172e-7■■□□□ 12.8
EIF3DO15371 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.242e-7■■□□□ 12.8
EIF3DO15371 STAT1-212ENST00000540176 4216 ntTSL 5 BASIC12.09□□□□□ -0.472e-7■■□□□ 12.8
EIF3DO15371 STAT1-208ENST00000432058 567 ntTSL 411.55□□□□□ -0.562e-7■■□□□ 12.8
EIF3DO15371 SUPT16H-207ENST00000557394 2324 ntTSL 210.91□□□□□ -0.665e-7■■□□□ 12.8
EIF3DO15371 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC13.91□□□□□ -0.187e-9■■□□□ 12.8
EIF3DO15371 MT1G-204ENST00000569500 305 ntTSL 3 BASIC13.19□□□□□ -0.37e-9■■□□□ 12.8
EIF3DO15371 MT1G-201ENST00000379811 405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.547e-9■■□□□ 12.8
EIF3DO15371 MT1G-202ENST00000444837 406 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.927e-9■■□□□ 12.8
EIF3DO15371 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.283e-6■■□□□ 12.8
EIF3DO15371 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.72■□□□□ 0.113e-6■■□□□ 12.8
EIF3DO15371 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.193e-6■■□□□ 12.8
EIF3DO15371 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.321e-6■■□□□ 12.7
EIF3DO15371 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.181e-6■■□□□ 12.7
EIF3DO15371 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.37■■□□□ 1.171e-6■■□□□ 12.7
EIF3DO15371 MYO18A-208ENST00000530557 1118 ntTSL 520.44■□□□□ 0.861e-6■■□□□ 12.7
EIF3DO15371 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.85■□□□□ 0.611e-6■■□□□ 12.7
EIF3DO15371 MYO18A-217ENST00000533652 542 ntTSL 515.53■□□□□ 0.081e-6■■□□□ 12.7
EIF3DO15371 MYO18A-207ENST00000530254 6479 ntTSL 1 (best)13.84□□□□□ -0.191e-6■■□□□ 12.7
EIF3DO15371 USP34-213ENST00000482250 515 ntTSL 312.2□□□□□ -0.461e-6■■□□□ 12.7
EIF3DO15371 MYO18A-202ENST00000527372 9992 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.521e-6■■□□□ 12.7
EIF3DO15371 MYO18A-209ENST00000531253 7504 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.551e-6■■□□□ 12.7
EIF3DO15371 MYO18A-223ENST00000628822 7501 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.551e-6■■□□□ 12.7
EIF3DO15371 MYO18A-214ENST00000533112 7522 ntTSL 1 (best) BASIC11.03□□□□□ -0.641e-6■■□□□ 12.7
EIF3DO15371 KMT2C-212ENST00000558084 16862 ntTSL 1 (best)7.49□□□□□ -1.213e-6■■□□□ 12.7
EIF3DO15371 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.213e-6■■□□□ 12.7
EIF3DO15371 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.213e-6■■□□□ 12.7
EIF3DO15371 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.221e-6■■□□□ 12.7
EIF3DO15371 KMT2C-203ENST00000360104 11186 ntTSL 1 (best)5.81□□□□□ -1.483e-6■■□□□ 12.7
EIF3DO15371 USP34-216ENST00000487547 612 ntTSL 35.74□□□□□ -1.491e-6■■□□□ 12.7
EIF3DO15371 KMT2C-208ENST00000473186 12854 ntTSL 1 (best)4.84□□□□□ -1.633e-6■■□□□ 12.7
EIF3DO15371 BRWD3-202ENST00000473691 2829 ntTSL 24.4□□□□□ -1.71e-6■■□□□ 12.7
EIF3DO15371 TTC3-214ENST00000472398 2305 ntTSL 1 (best)3.3□□□□□ -1.881e-6■■□□□ 12.7
EIF3DO15371 USP34-209ENST00000468703 228 ntTSL 52.89□□□□□ -1.951e-6■■□□□ 12.7
EIF3DO15371 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.189e-7■■□□□ 12.7
EIF3DO15371 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.349e-7■■□□□ 12.7
EIF3DO15371 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.599e-7■■□□□ 12.7
EIF3DO15371 SEPT11-210ENST00000510641 1870 ntTSL 1 (best)19.98■□□□□ 0.794e-9■■□□□ 12.7
EIF3DO15371 SEPT11-205ENST00000504637 548 ntTSL 519.54■□□□□ 0.724e-9■■□□□ 12.7
EIF3DO15371 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.46■□□□□ 0.714e-9■■□□□ 12.7
EIF3DO15371 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.654e-9■■□□□ 12.7
EIF3DO15371 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.364e-9■■□□□ 12.7
EIF3DO15371 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.344e-9■■□□□ 12.7
EIF3DO15371 SEPT11-212ENST00000512575 587 ntTSL 44.02□□□□□ -1.774e-9■■□□□ 12.7
EIF3DO15371 SEPT9-219ENST00000588575 559 ntTSL 422.14■■□□□ 1.131e-6■■□□□ 12.7
EIF3DO15371 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.171e-6■■□□□ 12.7
EIF3DO15371 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.48■□□□□ 0.071e-6■■□□□ 12.7
EIF3DO15371 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.331e-6■■□□□ 12.7
EIF3DO15371 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.581e-16■■□□□ 12.7
EIF3DO15371 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC13.53□□□□□ -0.241e-16■■□□□ 12.7
EIF3DO15371 MT1E-203ENST00000568293 332 ntTSL 2 BASIC11.09□□□□□ -0.631e-16■■□□□ 12.7
EIF3DO15371 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.564e-6■■□□□ 12.7
EIF3DO15371 TSPAN6-203ENST00000496771 1025 ntTSL 321.17■□□□□ 0.981e-11■■□□□ 12.6
EIF3DO15371 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.773e-6■■□□□ 12.6
EIF3DO15371 MAD1L1-212ENST00000450235 850 ntTSL 318.19■□□□□ 0.53e-6■■□□□ 12.6
EIF3DO15371 TSPAN6-201ENST00000373020 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.211e-11■■□□□ 12.6
EIF3DO15371 PPM1G-202ENST00000472077 3752 ntTSL 210.03□□□□□ -0.83e-6■■□□□ 12.6
EIF3DO15371 ATP11A-205ENST00000419448 435 ntTSL 38.64□□□□□ -1.034e-7■■□□□ 12.6
EIF3DO15371 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.54□□□□□ -1.21e-11■■□□□ 12.6
EIF3DO15371 TSPAN6-202ENST00000494424 820 ntTSL 26.3□□□□□ -1.41e-11■■□□□ 12.6
EIF3DO15371 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.88□□□□□ -1.471e-11■■□□□ 12.6
EIF3DO15371 GREB1-209ENST00000472040 571 ntTSL 516.2■□□□□ 0.182e-7■■□□□ 12.6
EIF3DO15371 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC13.87□□□□□ -0.192e-7■■□□□ 12.6
EIF3DO15371 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.332e-7■■□□□ 12.6
EIF3DO15371 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.372e-7■■□□□ 12.6
EIF3DO15371 USP34-207ENST00000463046 6307 ntTSL 26.72□□□□□ -1.333e-6■■□□□ 12.6
EIF3DO15371 SLBP-203ENST00000480936 558 ntTSL 425.72■■□□□ 1.715e-12■■□□□ 12.6
EIF3DO15371 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.75e-12■■□□□ 12.6
EIF3DO15371 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.845e-12■■□□□ 12.6
EIF3DO15371 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.47■□□□□ 0.715e-12■■□□□ 12.6
EIF3DO15371 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.59■□□□□ 0.415e-12■■□□□ 12.6
EIF3DO15371 PKD1-220ENST00000487932 6464 ntTSL 515.85■□□□□ 0.131e-6■■□□□ 12.6
EIF3DO15371 BZW1-208ENST00000452206 1059 ntTSL 514.3□□□□□ -0.128e-9■■□□□ 12.5
EIF3DO15371 BZW1-204ENST00000410110 1075 ntTSL 511.33□□□□□ -0.68e-9■■□□□ 12.5
EIF3DO15371 BZW1-212ENST00000464483 530 ntTSL 210.62□□□□□ -0.718e-9■■□□□ 12.5
EIF3DO15371 BZW1-207ENST00000450637 578 ntTSL 47.85□□□□□ -1.158e-9■■□□□ 12.5
EIF3DO15371 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.168e-9■■□□□ 12.5
EIF3DO15371 BZW1-210ENST00000460660 265 ntTSL 1 (best)7.51□□□□□ -1.218e-9■■□□□ 12.5
Retrieved 100 of 4,069 protein–RNA pairs in 279.6 ms