RNA–Protein interactions for RNA: ENST00000330439.6

MT1E-202, Transcript of metallothionein 1E, humanhuman

TSL 1 (best) BASIC

Gene MT1E, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT1E-202ENST00000330439 NISCHQ9Y2I1 1504 aa32.62■■■□□ 2.81
MT1E-202ENST00000330439 ABCC9O60706 1549 aa30.09■■■□□ 2.41
MT1E-202ENST00000330439 CCDC180Q9P1Z9 1646 aa29.44■■■□□ 2.3
MT1E-202ENST00000330439 DNAJC5BQ9UF47 199 aa28.97■■■□□ 2.23
MT1E-202ENST00000330439 RB1CC1Q8TDY2 1594 aa28.31■■■□□ 2.12
MT1E-202ENST00000330439 NACADO15069 1562 aa28.01■■■□□ 2.07
MT1E-202ENST00000330439 PABPN1Q86U42 306 aaKnown RBP eCLIP27.95■■■□□ 2.06
MT1E-202ENST00000330439 UNC13AQ9UPW8 1703 aa27.73■■■□□ 2.03
MT1E-202ENST00000330439 BICRAQ9NZM4 1560 aa27.68■■■□□ 2.02
MT1E-202ENST00000330439 DCAF8L2P0C7V8 631 aa27.63■■■□□ 2.01
MT1E-202ENST00000330439 MYO15BQ96JP2 1530 aa27.5■■□□□ 1.99
MT1E-202ENST00000330439 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
MT1E-202ENST00000330439 CC2D2AQ9P2K1 1620 aa27.16■■□□□ 1.94
MT1E-202ENST00000330439 SHROOM4Q9ULL8 1493 aa27.12■■□□□ 1.93
MT1E-202ENST00000330439 EIF4G1Q04637 1599 aaKnown RBP26.96■■□□□ 1.91
MT1E-202ENST00000330439 DNAJC5Q9H3Z4 198 aa26.93■■□□□ 1.9
MT1E-202ENST00000330439 ZCCHC6Q5VYS8 1495 aaKnown RBP26.92■■□□□ 1.9
MT1E-202ENST00000330439 DCAF1Q9Y4B6 1507 aa26.91■■□□□ 1.9
MT1E-202ENST00000330439 SCRIBQ14160 1630 aa26.79■■□□□ 1.88
MT1E-202ENST00000330439 CUX2O14529 1486 aa26.17■■□□□ 1.78
MT1E-202ENST00000330439 NCAPD3P42695 1498 aa25.95■■□□□ 1.74
MT1E-202ENST00000330439 ERCC6Q03468 1493 aa25.91■■□□□ 1.74
MT1E-202ENST00000330439 ATAD2BQ9ULI0 1458 aa25.78■■□□□ 1.72
MT1E-202ENST00000330439 NESP48681 1621 aa25.74■■□□□ 1.71
MT1E-202ENST00000330439 HMGXB3Q12766 1538 aa25.63■■□□□ 1.69
MT1E-202ENST00000330439 THOC2Q8NI27 1593 aaKnown RBP25.56■■□□□ 1.68
MT1E-202ENST00000330439 SMARCA2P51531 1590 aa25.56■■□□□ 1.68
MT1E-202ENST00000330439 SMARCA4P51532 1647 aa25.53■■□□□ 1.68
MT1E-202ENST00000330439 BAZ1BQ9UIG0 1483 aaKnown RBP25.39■■□□□ 1.65
MT1E-202ENST00000330439 LAMC3Q9Y6N6 1575 aa25.36■■□□□ 1.65
MT1E-202ENST00000330439 PEG3Q9GZU2 1588 aa25.35■■□□□ 1.65
MT1E-202ENST00000330439 TRIM41Q8WV44 630 aa25.35■■□□□ 1.65
MT1E-202ENST00000330439 BAZ1AQ9NRL2 1556 aaPredicted RBP25.29■■□□□ 1.64
MT1E-202ENST00000330439 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
MT1E-202ENST00000330439 PDS5BQ9NTI5 1447 aa25.22■■□□□ 1.63
MT1E-202ENST00000330439 MROH2BQ7Z745 1585 aa25.16■■□□□ 1.62
MT1E-202ENST00000330439 CADPSQ9ULU8 1353 aa25.1■■□□□ 1.61
MT1E-202ENST00000330439 MRC2Q9UBG0 1479 aa25.08■■□□□ 1.6
MT1E-202ENST00000330439 WDR62O43379 1518 aa25.07■■□□□ 1.6
MT1E-202ENST00000330439 OSCARQ8IYS5 282 aa24.85■■□□□ 1.57
MT1E-202ENST00000330439 CEP164Q9UPV0 1460 aa24.82■■□□□ 1.56
MT1E-202ENST00000330439 FANCD2Q9BXW9 1451 aa24.78■■□□□ 1.56
MT1E-202ENST00000330439 WIZO95785 1651 aa24.78■■□□□ 1.56
MT1E-202ENST00000330439 CFTRP13569 1480 aa24.7■■□□□ 1.55
MT1E-202ENST00000330439 URB2Q14146 1524 aaKnown RBP24.68■■□□□ 1.54
MT1E-202ENST00000330439 RIMBP3CA6NJZ7 1639 aa24.62■■□□□ 1.53
MT1E-202ENST00000330439 RIMBP3BA6NNM3 1639 aa24.62■■□□□ 1.53
MT1E-202ENST00000330439 RIMBP3Q9UFD9 1639 aa24.62■■□□□ 1.53
MT1E-202ENST00000330439 ARHGEF11O15085 1522 aa24.5■■□□□ 1.51
MT1E-202ENST00000330439 ZNF608Q9ULD9 1512 aaPredicted RBP24.48■■□□□ 1.51
MT1E-202ENST00000330439 RSF1Q96T23 1441 aaPredicted RBP24.43■■□□□ 1.5
MT1E-202ENST00000330439 TOP2AP11388 1531 aaKnown RBP24.4■■□□□ 1.5
MT1E-202ENST00000330439 IFT140Q96RY7 1462 aa24.38■■□□□ 1.49
MT1E-202ENST00000330439 CYB5RLQ6IPT4 315 aa24.32■■□□□ 1.48
MT1E-202ENST00000330439 TOPBP1Q92547 1522 aa24.27■■□□□ 1.48
MT1E-202ENST00000330439 ARAP1Q96P48 1450 aa24.26■■□□□ 1.47
MT1E-202ENST00000330439 PRDM2Q13029 1718 aa24.26■■□□□ 1.47
MT1E-202ENST00000330439 EIF4G3O43432 1585 aaKnown RBP24.22■■□□□ 1.47
MT1E-202ENST00000330439 CCDC88BA6NC98 1476 aa24.19■■□□□ 1.46
MT1E-202ENST00000330439 AQRO60306 1485 aaKnown RBP eCLIP24.15■■□□□ 1.46
MT1E-202ENST00000330439 TRHP20396 242 aaPredicted RBP24.14■■□□□ 1.45
MT1E-202ENST00000330439 CHD1O14646 1710 aa24.13■■□□□ 1.45
MT1E-202ENST00000330439 AEBP2Q6ZN18 517 aaPredicted RBP24.12■■□□□ 1.45
MT1E-202ENST00000330439 TARBP1Q13395 1621 aaKnown RBP24.12■■□□□ 1.45
MT1E-202ENST00000330439 ABCC8Q09428 1581 aa24.08■■□□□ 1.45
MT1E-202ENST00000330439 DNMBPQ6XZF7 1577 aa24.08■■□□□ 1.44
MT1E-202ENST00000330439 POLA1P09884 1462 aaPredicted RBP23.99■■□□□ 1.43
MT1E-202ENST00000330439 FBLN2P98095 1184 aa23.97■■□□□ 1.43
MT1E-202ENST00000330439 CLASP1Q7Z460 1538 aa23.94■■□□□ 1.42
MT1E-202ENST00000330439 RAD54L2Q9Y4B4 1467 aa23.93■■□□□ 1.42
MT1E-202ENST00000330439 TDRD9Q8NDG6 1382 aaKnown RBP23.9■■□□□ 1.42
MT1E-202ENST00000330439 SNAPC4Q5SXM2 1469 aa23.85■■□□□ 1.41
MT1E-202ENST00000330439 SOGA1O94964 1423 aa23.84■■□□□ 1.41
MT1E-202ENST00000330439 MAGI1Q96QZ7 1491 aaPredicted RBP23.74■■□□□ 1.39
MT1E-202ENST00000330439 SYNJ1O43426 1573 aa23.74■■□□□ 1.39
MT1E-202ENST00000330439 WDR97A6NE52 1622 aa23.73■■□□□ 1.39
MT1E-202ENST00000330439 CHMP7Q8WUX9 453 aaPredicted RBP23.73■■□□□ 1.39
MT1E-202ENST00000330439 FGD5Q6ZNL6 1462 aa23.72■■□□□ 1.39
MT1E-202ENST00000330439 SYNJ2O15056 1496 aa23.68■■□□□ 1.38
MT1E-202ENST00000330439 GRIN2BQ13224 1484 aa23.68■■□□□ 1.38
MT1E-202ENST00000330439 GAPVD1Q14C86 1478 aa23.67■■□□□ 1.38
MT1E-202ENST00000330439 CUX1P39880 1505 aa23.66■■□□□ 1.38
MT1E-202ENST00000330439 ERCC6L2Q5T890 1561 aa23.57■■□□□ 1.36
MT1E-202ENST00000330439 PBRM1Q86U86 1689 aa23.49■■□□□ 1.35
MT1E-202ENST00000330439 ABCA5Q8WWZ7 1642 aa23.45■■□□□ 1.34
MT1E-202ENST00000330439 ABCA10Q8WWZ4 1543 aa23.44■■□□□ 1.34
MT1E-202ENST00000330439 NUP160Q12769 1436 aa23.4■■□□□ 1.34
MT1E-202ENST00000330439 GRIN2AQ12879 1464 aa23.39■■□□□ 1.34
MT1E-202ENST00000330439 CEP170Q5SW79 1584 aa23.39■■□□□ 1.33
MT1E-202ENST00000330439 SHROOM2Q13796 1616 aa23.34■■□□□ 1.33
MT1E-202ENST00000330439 KIF13AQ9H1H9 1805 aa23.33■■□□□ 1.32
MT1E-202ENST00000330439 ADAMTS12P58397 1594 aa23.3■■□□□ 1.32
MT1E-202ENST00000330439 FHAD1B1AJZ9 1412 aa23.21■■□□□ 1.31
MT1E-202ENST00000330439 KDM4FA0A1W2PPD8 638 aa23.17■■□□□ 1.3
MT1E-202ENST00000330439 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
MT1E-202ENST00000330439 ABCC10Q5T3U5 1492 aa23.16■■□□□ 1.3
MT1E-202ENST00000330439 PRG4Q92954 1404 aaPredicted RBP23.16■■□□□ 1.3
MT1E-202ENST00000330439 FAM69CQ0P6D2 419 aa23.11■■□□□ 1.29
MT1E-202ENST00000330439 JPH4Q96JJ6 628 aa23.11■■□□□ 1.29
MT1E-202ENST00000330439 ERICH3Q5RHP9 1530 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms