RNA–Protein interactions for RNA: ENST00000539318.5

NPIPB4-211, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 695 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-211ENST00000539318 NISCHQ9Y2I1 1504 aa21.48■■□□□ 1.03
NPIPB4-211ENST00000539318 CCDC180Q9P1Z9 1646 aa18.97■□□□□ 0.63
NPIPB4-211ENST00000539318 ABCC9O60706 1549 aa18.39■□□□□ 0.53
NPIPB4-211ENST00000539318 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
NPIPB4-211ENST00000539318 ZCCHC6Q5VYS8 1495 aaKnown RBP17.9■□□□□ 0.46
NPIPB4-211ENST00000539318 DCAF8L2P0C7V8 631 aa17.84■□□□□ 0.45
NPIPB4-211ENST00000539318 NACADO15069 1562 aa17.81■□□□□ 0.44
NPIPB4-211ENST00000539318 MYO15BQ96JP2 1530 aa17.81■□□□□ 0.44
NPIPB4-211ENST00000539318 DCAF1Q9Y4B6 1507 aa17.78■□□□□ 0.44
NPIPB4-211ENST00000539318 RB1CC1Q8TDY2 1594 aa17.76■□□□□ 0.43
NPIPB4-211ENST00000539318 UNC13AQ9UPW8 1703 aa17.41■□□□□ 0.38
NPIPB4-211ENST00000539318 SCRIBQ14160 1630 aa17.29■□□□□ 0.36
NPIPB4-211ENST00000539318 BICRAQ9NZM4 1560 aa17.28■□□□□ 0.36
NPIPB4-211ENST00000539318 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.35
NPIPB4-211ENST00000539318 SHROOM4Q9ULL8 1493 aa17.05■□□□□ 0.32
NPIPB4-211ENST00000539318 CHIC1Q5VXU3 224 aa16.85■□□□□ 0.29
NPIPB4-211ENST00000539318 DNAJC5BQ9UF47 199 aa16.85■□□□□ 0.29
NPIPB4-211ENST00000539318 EIF4G1Q04637 1599 aaKnown RBP16.77■□□□□ 0.27
NPIPB4-211ENST00000539318 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
NPIPB4-211ENST00000539318 CC2D2AQ9P2K1 1620 aa16.66■□□□□ 0.26
NPIPB4-211ENST00000539318 BAZ1AQ9NRL2 1556 aaPredicted RBP16.6■□□□□ 0.25
NPIPB4-211ENST00000539318 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
NPIPB4-211ENST00000539318 MROH2BQ7Z745 1585 aa16.55■□□□□ 0.24
NPIPB4-211ENST00000539318 ATAD2BQ9ULI0 1458 aa16.49■□□□□ 0.23
NPIPB4-211ENST00000539318 NCAPD3P42695 1498 aa16.48■□□□□ 0.23
NPIPB4-211ENST00000539318 PEG3Q9GZU2 1588 aa16.47■□□□□ 0.23
NPIPB4-211ENST00000539318 RSF1Q96T23 1441 aaPredicted RBP16.45■□□□□ 0.22
NPIPB4-211ENST00000539318 SMARCA2P51531 1590 aa16.43■□□□□ 0.22
NPIPB4-211ENST00000539318 WIZO95785 1651 aa16.37■□□□□ 0.21
NPIPB4-211ENST00000539318 HMGXB3Q12766 1538 aa16.35■□□□□ 0.21
NPIPB4-211ENST00000539318 BAZ1BQ9UIG0 1483 aaKnown RBP16.31■□□□□ 0.2
NPIPB4-211ENST00000539318 TOP2AP11388 1531 aaKnown RBP16.18■□□□□ 0.18
NPIPB4-211ENST00000539318 SUPT5HO00267 1087 aaKnown RBP16.13■□□□□ 0.17
NPIPB4-211ENST00000539318 CCDC88BA6NC98 1476 aa16.04■□□□□ 0.16
NPIPB4-211ENST00000539318 NESP48681 1621 aa16■□□□□ 0.15
NPIPB4-211ENST00000539318 CADPSQ9ULU8 1353 aa16■□□□□ 0.15
NPIPB4-211ENST00000539318 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.14
NPIPB4-211ENST00000539318 CFTRP13569 1480 aa15.93■□□□□ 0.14
NPIPB4-211ENST00000539318 PDS5BQ9NTI5 1447 aa15.85■□□□□ 0.13
NPIPB4-211ENST00000539318 PRDM2Q13029 1718 aa15.78■□□□□ 0.12
NPIPB4-211ENST00000539318 KIF21AQ7Z4S6 1674 aa15.78■□□□□ 0.12
NPIPB4-211ENST00000539318 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
NPIPB4-211ENST00000539318 FANCD2Q9BXW9 1451 aa15.77■□□□□ 0.11
NPIPB4-211ENST00000539318 CEP164Q9UPV0 1460 aa15.7■□□□□ 0.1
NPIPB4-211ENST00000539318 THOC2Q8NI27 1593 aaKnown RBP15.68■□□□□ 0.1
NPIPB4-211ENST00000539318 MRC2Q9UBG0 1479 aa15.65■□□□□ 0.1
NPIPB4-211ENST00000539318 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
NPIPB4-211ENST00000539318 WDR62O43379 1518 aa15.61■□□□□ 0.09
NPIPB4-211ENST00000539318 CUX2O14529 1486 aa15.6■□□□□ 0.09
NPIPB4-211ENST00000539318 ABCC8Q09428 1581 aa15.56■□□□□ 0.08
NPIPB4-211ENST00000539318 TOPBP1Q92547 1522 aa15.55■□□□□ 0.08
NPIPB4-211ENST00000539318 DNMBPQ6XZF7 1577 aa15.53■□□□□ 0.08
NPIPB4-211ENST00000539318 CUX1P39880 1505 aa15.51■□□□□ 0.07
NPIPB4-211ENST00000539318 WRNQ14191 1432 aaPredicted RBP eCLIP15.46■□□□□ 0.07
NPIPB4-211ENST00000539318 SENP3Q9H4L4 574 aaPredicted RBP15.46■□□□□ 0.07
NPIPB4-211ENST00000539318 POLA1P09884 1462 aaPredicted RBP15.43■□□□□ 0.06
NPIPB4-211ENST00000539318 SYNJ1O43426 1573 aa15.41■□□□□ 0.06
NPIPB4-211ENST00000539318 TOP2BQ02880 1626 aa15.41■□□□□ 0.06
NPIPB4-211ENST00000539318 FGD5Q6ZNL6 1462 aa15.4■□□□□ 0.06
NPIPB4-211ENST00000539318 BIVM-ERCC5R4GMW8 1640 aa15.4■□□□□ 0.06
NPIPB4-211ENST00000539318 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
NPIPB4-211ENST00000539318 SOGA1O94964 1423 aa15.39■□□□□ 0.05
NPIPB4-211ENST00000539318 TARBP1Q13395 1621 aaKnown RBP15.39■□□□□ 0.05
NPIPB4-211ENST00000539318 RAD54L2Q9Y4B4 1467 aa15.37■□□□□ 0.05
NPIPB4-211ENST00000539318 ZNF608Q9ULD9 1512 aaPredicted RBP15.33■□□□□ 0.05
NPIPB4-211ENST00000539318 ABCA10Q8WWZ4 1543 aa15.29■□□□□ 0.04
NPIPB4-211ENST00000539318 AQRO60306 1485 aaKnown RBP eCLIP15.28■□□□□ 0.049e-14■■■□□ 18.6
NPIPB4-211ENST00000539318 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
NPIPB4-211ENST00000539318 WDR97A6NE52 1622 aa15.27■□□□□ 0.03
NPIPB4-211ENST00000539318 TRIM41Q8WV44 630 aa15.23■□□□□ 0.03
NPIPB4-211ENST00000539318 EIF4G3O43432 1585 aaKnown RBP15.23■□□□□ 0.03
NPIPB4-211ENST00000539318 GAPVD1Q14C86 1478 aa15.2■□□□□ 0.02
NPIPB4-211ENST00000539318 ABCA5Q8WWZ7 1642 aa15.19■□□□□ 0.02
NPIPB4-211ENST00000539318 PHF23Q9BUL5 403 aaPredicted RBP15.17■□□□□ 0.02
NPIPB4-211ENST00000539318 GRIN2BQ13224 1484 aa15.15■□□□□ 0.02
NPIPB4-211ENST00000539318 IGF1RP08069 1367 aa15.11■□□□□ 0.01
NPIPB4-211ENST00000539318 KIF27Q86VH2 1401 aa15.11■□□□□ 0.01
NPIPB4-211ENST00000539318 PBRM1Q86U86 1689 aa15.11■□□□□ 0.01
NPIPB4-211ENST00000539318 SNAPC4Q5SXM2 1469 aa15.09■□□□□ 0.01
NPIPB4-211ENST00000539318 MAGI1Q96QZ7 1491 aaPredicted RBP15.09■□□□□ 0.01
NPIPB4-211ENST00000539318 ERICH3Q5RHP9 1530 aa15.09■□□□□ 0.01
NPIPB4-211ENST00000539318 RUSC2Q8N2Y8 1516 aa15.09■□□□□ 0.01
NPIPB4-211ENST00000539318 OSCARQ8IYS5 282 aa15.04■□□□□ -0
NPIPB4-211ENST00000539318 SYNJ2O15056 1496 aa15.03■□□□□ -0
NPIPB4-211ENST00000539318 CHMP7Q8WUX9 453 aaPredicted RBP15.03■□□□□ -0
NPIPB4-211ENST00000539318 FHAD1B1AJZ9 1412 aa15.02■□□□□ -0
NPIPB4-211ENST00000539318 CHD1O14646 1710 aa15.02□□□□□ -0.01
NPIPB4-211ENST00000539318 FBLN2P98095 1184 aa15.01□□□□□ -0.01
NPIPB4-211ENST00000539318 ADAMTS12P58397 1594 aa15.01□□□□□ -0.01
NPIPB4-211ENST00000539318 DNAJC5Q9H3Z4 198 aa15□□□□□ -0.01
NPIPB4-211ENST00000539318 CARMIL1Q5VZK9 1371 aa14.98□□□□□ -0.01
NPIPB4-211ENST00000539318 CSRNP3Q8WYN3 585 aa14.96□□□□□ -0.01
NPIPB4-211ENST00000539318 CUL7Q14999 1698 aa14.96□□□□□ -0.01
NPIPB4-211ENST00000539318 GRIN2AQ12879 1464 aa14.95□□□□□ -0.02
NPIPB4-211ENST00000539318 EEA1Q15075 1411 aa14.95□□□□□ -0.02
NPIPB4-211ENST00000539318 PRXQ9BXM0 1461 aa14.92□□□□□ -0.02
NPIPB4-211ENST00000539318 NUP160Q12769 1436 aa14.92□□□□□ -0.02
NPIPB4-211ENST00000539318 FAM9AQ8IZU1 332 aaPredicted RBP14.89□□□□□ -0.03
NPIPB4-211ENST00000539318 RAPGEF2Q9Y4G8 1499 aa14.89□□□□□ -0.03
NPIPB4-211ENST00000539318 CLASP1Q7Z460 1538 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms