RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-222ENST00000614197 NISCHQ9Y2I1 1504 aa26.77■■□□□ 1.88
NPIPB4-222ENST00000614197 CCDC180Q9P1Z9 1646 aa23.89■■□□□ 1.42
NPIPB4-222ENST00000614197 ABCC9O60706 1549 aa23.75■■□□□ 1.39
NPIPB4-222ENST00000614197 RB1CC1Q8TDY2 1594 aa22.72■■□□□ 1.23
NPIPB4-222ENST00000614197 DCAF8L2P0C7V8 631 aa22.7■■□□□ 1.22
NPIPB4-222ENST00000614197 NACADO15069 1562 aa22.6■■□□□ 1.21
NPIPB4-222ENST00000614197 MYO15BQ96JP2 1530 aa22.34■■□□□ 1.17
NPIPB4-222ENST00000614197 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
NPIPB4-222ENST00000614197 PABPN1Q86U42 306 aaKnown RBP eCLIP22.18■■□□□ 1.14
NPIPB4-222ENST00000614197 DCAF1Q9Y4B6 1507 aa22.13■■□□□ 1.13
NPIPB4-222ENST00000614197 DNAJC5BQ9UF47 199 aa21.99■■□□□ 1.11
NPIPB4-222ENST00000614197 UNC13AQ9UPW8 1703 aa21.97■■□□□ 1.11
NPIPB4-222ENST00000614197 BICRAQ9NZM4 1560 aa21.9■■□□□ 1.1
NPIPB4-222ENST00000614197 SCRIBQ14160 1630 aa21.81■■□□□ 1.08
NPIPB4-222ENST00000614197 SHROOM4Q9ULL8 1493 aa21.78■■□□□ 1.08
NPIPB4-222ENST00000614197 EIF4G1Q04637 1599 aaKnown RBP21.43■■□□□ 1.02
NPIPB4-222ENST00000614197 CC2D2AQ9P2K1 1620 aa21.41■■□□□ 1.02
NPIPB4-222ENST00000614197 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.01
NPIPB4-222ENST00000614197 NCAPD3P42695 1498 aa20.86■□□□□ 0.93
NPIPB4-222ENST00000614197 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
NPIPB4-222ENST00000614197 SMARCA2P51531 1590 aa20.81■□□□□ 0.92
NPIPB4-222ENST00000614197 BAZ1AQ9NRL2 1556 aaPredicted RBP20.81■□□□□ 0.92
NPIPB4-222ENST00000614197 SMARCA4P51532 1647 aa20.81■□□□□ 0.92
NPIPB4-222ENST00000614197 HMGXB3Q12766 1538 aa20.71■□□□□ 0.91
NPIPB4-222ENST00000614197 BAZ1BQ9UIG0 1483 aaKnown RBP20.69■□□□□ 0.9
NPIPB4-222ENST00000614197 MROH2BQ7Z745 1585 aa20.6■□□□□ 0.89
NPIPB4-222ENST00000614197 ERCC6Q03468 1493 aa20.59■□□□□ 0.89
NPIPB4-222ENST00000614197 PEG3Q9GZU2 1588 aa20.59■□□□□ 0.89
NPIPB4-222ENST00000614197 CUX2O14529 1486 aa20.41■□□□□ 0.86
NPIPB4-222ENST00000614197 NESP48681 1621 aa20.4■□□□□ 0.86
NPIPB4-222ENST00000614197 LAMC3Q9Y6N6 1575 aa20.35■□□□□ 0.85
NPIPB4-222ENST00000614197 WIZO95785 1651 aa20.33■□□□□ 0.85
NPIPB4-222ENST00000614197 PDS5BQ9NTI5 1447 aa20.32■□□□□ 0.84
NPIPB4-222ENST00000614197 RSF1Q96T23 1441 aaPredicted RBP20.29■□□□□ 0.84
NPIPB4-222ENST00000614197 CADPSQ9ULU8 1353 aa20.27■□□□□ 0.84
NPIPB4-222ENST00000614197 TOP2AP11388 1531 aaKnown RBP20.17■□□□□ 0.82
NPIPB4-222ENST00000614197 DNAJC5Q9H3Z4 198 aa20.14■□□□□ 0.81
NPIPB4-222ENST00000614197 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
NPIPB4-222ENST00000614197 KIF21AQ7Z4S6 1674 aa20.1■□□□□ 0.81
NPIPB4-222ENST00000614197 MRC2Q9UBG0 1479 aa20.07■□□□□ 0.8
NPIPB4-222ENST00000614197 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
NPIPB4-222ENST00000614197 CFTRP13569 1480 aa20.05■□□□□ 0.8
NPIPB4-222ENST00000614197 FANCD2Q9BXW9 1451 aa20.03■□□□□ 0.8
NPIPB4-222ENST00000614197 WDR62O43379 1518 aa19.95■□□□□ 0.78
NPIPB4-222ENST00000614197 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
NPIPB4-222ENST00000614197 AEBP2Q6ZN18 517 aaPredicted RBP19.89■□□□□ 0.77
NPIPB4-222ENST00000614197 URB2Q14146 1524 aaKnown RBP19.78■□□□□ 0.76
NPIPB4-222ENST00000614197 PRDM2Q13029 1718 aa19.75■□□□□ 0.75
NPIPB4-222ENST00000614197 ABCC8Q09428 1581 aa19.71■□□□□ 0.75
NPIPB4-222ENST00000614197 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
NPIPB4-222ENST00000614197 IFT140Q96RY7 1462 aa19.64■□□□□ 0.73
NPIPB4-222ENST00000614197 TOPBP1Q92547 1522 aa19.64■□□□□ 0.73
NPIPB4-222ENST00000614197 DNMBPQ6XZF7 1577 aa19.59■□□□□ 0.73
NPIPB4-222ENST00000614197 OSCARQ8IYS5 282 aa19.59■□□□□ 0.73
NPIPB4-222ENST00000614197 ZNF608Q9ULD9 1512 aaPredicted RBP19.51■□□□□ 0.71
NPIPB4-222ENST00000614197 POLA1P09884 1462 aaPredicted RBP19.45■□□□□ 0.7
NPIPB4-222ENST00000614197 SOGA1O94964 1423 aa19.44■□□□□ 0.7
NPIPB4-222ENST00000614197 TRIM41Q8WV44 630 aa19.44■□□□□ 0.7
NPIPB4-222ENST00000614197 EIF4G3O43432 1585 aaKnown RBP19.4■□□□□ 0.7
NPIPB4-222ENST00000614197 AQRO60306 1485 aaKnown RBP eCLIP19.4■□□□□ 0.7
NPIPB4-222ENST00000614197 TARBP1Q13395 1621 aaKnown RBP19.38■□□□□ 0.69
NPIPB4-222ENST00000614197 FGD5Q6ZNL6 1462 aa19.38■□□□□ 0.69
NPIPB4-222ENST00000614197 RAD54L2Q9Y4B4 1467 aa19.37■□□□□ 0.69
NPIPB4-222ENST00000614197 FBLN2P98095 1184 aa19.37■□□□□ 0.69
NPIPB4-222ENST00000614197 TDRD9Q8NDG6 1382 aaKnown RBP19.35■□□□□ 0.69
NPIPB4-222ENST00000614197 CUX1P39880 1505 aa19.35■□□□□ 0.69
NPIPB4-222ENST00000614197 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
NPIPB4-222ENST00000614197 CHMP7Q8WUX9 453 aaPredicted RBP19.25■□□□□ 0.67
NPIPB4-222ENST00000614197 GRIN2BQ13224 1484 aa19.24■□□□□ 0.67
NPIPB4-222ENST00000614197 WRNQ14191 1432 aaPredicted RBP eCLIP19.22■□□□□ 0.67
NPIPB4-222ENST00000614197 SNAPC4Q5SXM2 1469 aa19.22■□□□□ 0.67
NPIPB4-222ENST00000614197 MAGI1Q96QZ7 1491 aaPredicted RBP19.2■□□□□ 0.66
NPIPB4-222ENST00000614197 GAPVD1Q14C86 1478 aa19.19■□□□□ 0.66
NPIPB4-222ENST00000614197 CHD1O14646 1710 aa19.17■□□□□ 0.66
NPIPB4-222ENST00000614197 ABCA10Q8WWZ4 1543 aa19.17■□□□□ 0.66
NPIPB4-222ENST00000614197 ARHGEF11O15085 1522 aa19.15■□□□□ 0.66
NPIPB4-222ENST00000614197 RIMBP3CA6NJZ7 1639 aa19.14■□□□□ 0.66
NPIPB4-222ENST00000614197 RIMBP3BA6NNM3 1639 aa19.14■□□□□ 0.66
NPIPB4-222ENST00000614197 RIMBP3Q9UFD9 1639 aa19.14■□□□□ 0.66
NPIPB4-222ENST00000614197 SYNJ2O15056 1496 aa19.13■□□□□ 0.65
NPIPB4-222ENST00000614197 TOP2BQ02880 1626 aa19.11■□□□□ 0.65
NPIPB4-222ENST00000614197 CYB5RLQ6IPT4 315 aa19.1■□□□□ 0.65
NPIPB4-222ENST00000614197 SYNJ1O43426 1573 aa19.1■□□□□ 0.65
NPIPB4-222ENST00000614197 BIVM-ERCC5R4GMW8 1640 aa19.07■□□□□ 0.64
NPIPB4-222ENST00000614197 PBRM1Q86U86 1689 aa19.05■□□□□ 0.64
NPIPB4-222ENST00000614197 ABCA5Q8WWZ7 1642 aa19.05■□□□□ 0.64
NPIPB4-222ENST00000614197 CHIC1Q5VXU3 224 aa19.04■□□□□ 0.64
NPIPB4-222ENST00000614197 CLASP1Q7Z460 1538 aa19■□□□□ 0.63
NPIPB4-222ENST00000614197 FHAD1B1AJZ9 1412 aa18.97■□□□□ 0.63
NPIPB4-222ENST00000614197 ARAP1Q96P48 1450 aa18.97■□□□□ 0.63
NPIPB4-222ENST00000614197 GRIN2AQ12879 1464 aa18.96■□□□□ 0.63
NPIPB4-222ENST00000614197 ERICH3Q5RHP9 1530 aa18.95■□□□□ 0.62
NPIPB4-222ENST00000614197 ADAMTS12P58397 1594 aa18.93■□□□□ 0.62
NPIPB4-222ENST00000614197 TRHP20396 242 aaPredicted RBP18.89■□□□□ 0.61
NPIPB4-222ENST00000614197 NUP160Q12769 1436 aa18.86■□□□□ 0.61
NPIPB4-222ENST00000614197 KIF27Q86VH2 1401 aa18.86■□□□□ 0.61
NPIPB4-222ENST00000614197 CEP170Q5SW79 1584 aa18.81■□□□□ 0.6
NPIPB4-222ENST00000614197 JPH4Q96JJ6 628 aa18.76■□□□□ 0.59
NPIPB4-222ENST00000614197 IGF1RP08069 1367 aa18.76■□□□□ 0.59
NPIPB4-222ENST00000614197 PRG4Q92954 1404 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms