RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 NISCHQ9Y2I1 1504 aa20.5■□□□□ 0.87
SUPT16H-207ENST00000557394 AEBP2Q6ZN18 517 aaPredicted RBP19.75■□□□□ 0.75
SUPT16H-207ENST00000557394 CHIC1Q5VXU3 224 aa18.77■□□□□ 0.59
SUPT16H-207ENST00000557394 SLC24A1O60721 1099 aa18.45■□□□□ 0.54
SUPT16H-207ENST00000557394 CCDC180Q9P1Z9 1646 aa18.06■□□□□ 0.48
SUPT16H-207ENST00000557394 MYT1Q01538 1121 aa17.9■□□□□ 0.46
SUPT16H-207ENST00000557394 PELP1Q8IZL8 1130 aaKnown RBP17.84■□□□□ 0.45
SUPT16H-207ENST00000557394 HRCP23327 699 aa17.75■□□□□ 0.43
SUPT16H-207ENST00000557394 TTBK1Q5TCY1 1321 aaPredicted RBP17.56■□□□□ 0.4
SUPT16H-207ENST00000557394 PRKCSHP14314 528 aaPredicted RBP17.45■□□□□ 0.38
SUPT16H-207ENST00000557394 PPARGC1BQ86YN6 1023 aaKnown RBP17.19■□□□□ 0.34
SUPT16H-207ENST00000557394 ZCCHC6Q5VYS8 1495 aaKnown RBP17.18■□□□□ 0.34
SUPT16H-207ENST00000557394 APLP2Q06481 763 aa17.16■□□□□ 0.34
SUPT16H-207ENST00000557394 DAXXQ9UER7 740 aaPredicted RBP17.16■□□□□ 0.34
SUPT16H-207ENST00000557394 ABCC9O60706 1549 aa17.14■□□□□ 0.33
SUPT16H-207ENST00000557394 PCGF6Q9BYE7 350 aa17.13■□□□□ 0.33
SUPT16H-207ENST00000557394 MYO15BQ96JP2 1530 aa17.11■□□□□ 0.33
SUPT16H-207ENST00000557394 ERICH6Q7L0X2 663 aa17.09■□□□□ 0.33
SUPT16H-207ENST00000557394 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
SUPT16H-207ENST00000557394 SUPT5HO00267 1087 aaKnown RBP16.95■□□□□ 0.3
SUPT16H-207ENST00000557394 SHROOM4Q9ULL8 1493 aa16.93■□□□□ 0.3
SUPT16H-207ENST00000557394 DCAF8L2P0C7V8 631 aa16.87■□□□□ 0.29
SUPT16H-207ENST00000557394 NACADO15069 1562 aa16.83■□□□□ 0.29
SUPT16H-207ENST00000557394 SCAF1Q9H7N4 1312 aaKnown RBP16.83■□□□□ 0.29
SUPT16H-207ENST00000557394 RB1CC1Q8TDY2 1594 aa16.74■□□□□ 0.27
SUPT16H-207ENST00000557394 SENP3Q9H4L4 574 aaPredicted RBP16.71■□□□□ 0.27
SUPT16H-207ENST00000557394 TRIM26Q12899 539 aaPredicted RBP16.67■□□□□ 0.26
SUPT16H-207ENST00000557394 ZEB1P37275 1124 aaPredicted RBP16.67■□□□□ 0.26
SUPT16H-207ENST00000557394 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.25
SUPT16H-207ENST00000557394 SCRIBQ14160 1630 aa16.48■□□□□ 0.23
SUPT16H-207ENST00000557394 LOC105371045A0A1W2PR82 267 aa16.42■□□□□ 0.22
SUPT16H-207ENST00000557394 ACIN1Q9UKV3 1341 aaKnown RBP16.4■□□□□ 0.22
SUPT16H-207ENST00000557394 UNC13AQ9UPW8 1703 aa16.4■□□□□ 0.22
SUPT16H-207ENST00000557394 NCBP3Q53F19 620 aaKnown RBP16.31■□□□□ 0.2
SUPT16H-207ENST00000557394 NEUROD1Q13562 356 aa16.29■□□□□ 0.2
SUPT16H-207ENST00000557394 PLPPR3Q6T4P5 718 aa16.24■□□□□ 0.19
SUPT16H-207ENST00000557394 EIF5BO60841 1220 aaKnown RBP16.23■□□□□ 0.19
SUPT16H-207ENST00000557394 BICRAQ9NZM4 1560 aa16.21■□□□□ 0.19
SUPT16H-207ENST00000557394 EHMT2Q96KQ7 1210 aa16.2■□□□□ 0.18
SUPT16H-207ENST00000557394 BCL11AQ9H165 835 aa16.2■□□□□ 0.18
SUPT16H-207ENST00000557394 GTF3C3Q9Y5Q9 886 aa16.19■□□□□ 0.18
SUPT16H-207ENST00000557394 CENPBP07199 599 aaPredicted RBP16.14■□□□□ 0.17
SUPT16H-207ENST00000557394 RTN4Q9NQC3 1192 aaKnown RBP16.11■□□□□ 0.17
SUPT16H-207ENST00000557394 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.16
SUPT16H-207ENST00000557394 DIEXFQ68CQ4 756 aaKnown RBP15.96■□□□□ 0.15
SUPT16H-207ENST00000557394 FAM9AQ8IZU1 332 aaPredicted RBP15.93■□□□□ 0.14
SUPT16H-207ENST00000557394 CECR2Q9BXF3 1484 aa15.9■□□□□ 0.14
SUPT16H-207ENST00000557394 PLEKHG5O94827 1062 aa15.87■□□□□ 0.13
SUPT16H-207ENST00000557394 BAZ1AQ9NRL2 1556 aaPredicted RBP15.87■□□□□ 0.13
SUPT16H-207ENST00000557394 ARXQ96QS3 562 aa15.83■□□□□ 0.12
SUPT16H-207ENST00000557394 SMARCA4P51532 1647 aa15.82■□□□□ 0.12
SUPT16H-207ENST00000557394 TRIM41Q8WV44 630 aa15.82■□□□□ 0.12
SUPT16H-207ENST00000557394 MROH2BQ7Z745 1585 aa15.8■□□□□ 0.12
SUPT16H-207ENST00000557394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.8■□□□□ 0.12
SUPT16H-207ENST00000557394 CCER1Q8TC90 406 aaPredicted RBP15.8■□□□□ 0.12
SUPT16H-207ENST00000557394 RSF1Q96T23 1441 aaPredicted RBP15.78■□□□□ 0.12
SUPT16H-207ENST00000557394 TIMELESSQ9UNS1 1208 aa15.76■□□□□ 0.11
SUPT16H-207ENST00000557394 EIF4G1Q04637 1599 aaKnown RBP15.73■□□□□ 0.11
SUPT16H-207ENST00000557394 RANGAP1P46060 587 aaPredicted RBP15.71■□□□□ 0.1
SUPT16H-207ENST00000557394 KLHL34Q8N239 644 aa15.7■□□□□ 0.1
SUPT16H-207ENST00000557394 WIZO95785 1651 aa15.67■□□□□ 0.1
SUPT16H-207ENST00000557394 ZNF316A6NFI3 1004 aaPredicted RBP15.66■□□□□ 0.1
SUPT16H-207ENST00000557394 PEG3Q9GZU2 1588 aa15.66■□□□□ 0.1
SUPT16H-207ENST00000557394 FOXD1Q16676 465 aa15.66■□□□□ 0.1
SUPT16H-207ENST00000557394 SMARCA2P51531 1590 aa15.61■□□□□ 0.09
SUPT16H-207ENST00000557394 ATAD2BQ9ULI0 1458 aa15.59■□□□□ 0.09
SUPT16H-207ENST00000557394 CLSPNQ9HAW4 1339 aa15.57■□□□□ 0.08
SUPT16H-207ENST00000557394 ANP32EQ9BTT0 268 aa15.57■□□□□ 0.08
SUPT16H-207ENST00000557394 YTHDC1Q96MU7 727 aaKnown RBP15.56■□□□□ 0.08
SUPT16H-207ENST00000557394 CC2D2AQ9P2K1 1620 aa15.55■□□□□ 0.08
SUPT16H-207ENST00000557394 TOP2AP11388 1531 aaKnown RBP15.54■□□□□ 0.08
SUPT16H-207ENST00000557394 MIER1Q8N108 512 aa15.52■□□□□ 0.08
SUPT16H-207ENST00000557394 NCAPD3P42695 1498 aa15.51■□□□□ 0.07
SUPT16H-207ENST00000557394 WRNQ14191 1432 aaPredicted RBP eCLIP15.5■□□□□ 0.07
SUPT16H-207ENST00000557394 HMGXB3Q12766 1538 aa15.5■□□□□ 0.07
SUPT16H-207ENST00000557394 BAZ1BQ9UIG0 1483 aaKnown RBP15.49■□□□□ 0.07
SUPT16H-207ENST00000557394 TULP1O00294 542 aaPredicted RBP15.46■□□□□ 0.07
SUPT16H-207ENST00000557394 PODXL2Q9NZ53 605 aa15.45■□□□□ 0.06
SUPT16H-207ENST00000557394 TSHZ2Q9NRE2 1034 aa15.43■□□□□ 0.06
SUPT16H-207ENST00000557394 SUPT16HQ9Y5B9 1047 aaKnown RBP15.43■□□□□ 0.06
SUPT16H-207ENST00000557394 AMER1Q5JTC6 1135 aaPredicted RBP15.42■□□□□ 0.06
SUPT16H-207ENST00000557394 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
SUPT16H-207ENST00000557394 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.04
SUPT16H-207ENST00000557394 HOMEZQ8IX15 550 aa15.33■□□□□ 0.04
SUPT16H-207ENST00000557394 DNAJC5BQ9UF47 199 aa15.26■□□□□ 0.03
SUPT16H-207ENST00000557394 CEP162Q5TB80 1403 aa15.24■□□□□ 0.03
SUPT16H-207ENST00000557394 UBE2Q2Q8WVN8 375 aa15.22■□□□□ 0.03
SUPT16H-207ENST00000557394 TNIKQ9UKE5 1360 aa15.18■□□□□ 0.02
SUPT16H-207ENST00000557394 KCNA4P22459 653 aa15.15■□□□□ 0.02
SUPT16H-207ENST00000557394 TAOK2Q9UL54 1235 aa15.1■□□□□ 0.01
SUPT16H-207ENST00000557394 PRDM2Q13029 1718 aa15.1■□□□□ 0.01
SUPT16H-207ENST00000557394 CFTRP13569 1480 aa15.09■□□□□ 0.01
SUPT16H-207ENST00000557394 CADPSQ9ULU8 1353 aa15.07■□□□□ 0
SUPT16H-207ENST00000557394 PDIA4P13667 645 aaKnown RBP15.05■□□□□ -0
SUPT16H-207ENST00000557394 LAMC3Q9Y6N6 1575 aa15.04■□□□□ -0
SUPT16H-207ENST00000557394 RBM19Q9Y4C8 960 aaKnown RBP15.02■□□□□ -0
SUPT16H-207ENST00000557394 EEA1Q15075 1411 aa15.02□□□□□ -0.01
SUPT16H-207ENST00000557394 HNRNPUL2Q1KMD3 747 aaKnown RBP15□□□□□ -0.01
SUPT16H-207ENST00000557394 NESP48681 1621 aa14.98□□□□□ -0.01
SUPT16H-207ENST00000557394 ABCC8Q09428 1581 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms