RNA–Protein interactions for RNA: ENST00000612152.4

TSPAN6-204, Transcript of tetraspanin 6, humanhuman

TSL 5 BASIC

Gene TSPAN6, Length 3,796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-204ENST00000612152 NISCHQ9Y2I1 1504 aa13.29□□□□□ -0.28
TSPAN6-204ENST00000612152 CCDC180Q9P1Z9 1646 aa11.74□□□□□ -0.53
TSPAN6-204ENST00000612152 ABCC9O60706 1549 aa11.37□□□□□ -0.59
TSPAN6-204ENST00000612152 ZCCHC6Q5VYS8 1495 aaKnown RBP11.13□□□□□ -0.63
TSPAN6-204ENST00000612152 UNC13AQ9UPW8 1703 aa11.05□□□□□ -0.64
TSPAN6-204ENST00000612152 DCAF1Q9Y4B6 1507 aa10.92□□□□□ -0.66
TSPAN6-204ENST00000612152 NACADO15069 1562 aa10.91□□□□□ -0.66
TSPAN6-204ENST00000612152 RB1CC1Q8TDY2 1594 aa10.89□□□□□ -0.67
TSPAN6-204ENST00000612152 DCAF8L2P0C7V8 631 aa10.89□□□□□ -0.67
TSPAN6-204ENST00000612152 MYO15BQ96JP2 1530 aa10.87□□□□□ -0.67
TSPAN6-204ENST00000612152 SCRIBQ14160 1630 aa10.83□□□□□ -0.68
TSPAN6-204ENST00000612152 BICRAQ9NZM4 1560 aa10.82□□□□□ -0.68
TSPAN6-204ENST00000612152 SHROOM4Q9ULL8 1493 aa10.65□□□□□ -0.7
TSPAN6-204ENST00000612152 PABPN1Q86U42 306 aaKnown RBP eCLIP10.65□□□□□ -0.71
TSPAN6-204ENST00000612152 CECR2Q9BXF3 1484 aa10.46□□□□□ -0.73
TSPAN6-204ENST00000612152 DNAJC5BQ9UF47 199 aa10.45□□□□□ -0.74
TSPAN6-204ENST00000612152 EIF4G1Q04637 1599 aaKnown RBP10.39□□□□□ -0.75
TSPAN6-204ENST00000612152 CC2D2AQ9P2K1 1620 aa10.35□□□□□ -0.75
TSPAN6-204ENST00000612152 MROH2BQ7Z745 1585 aa10.35□□□□□ -0.75
TSPAN6-204ENST00000612152 SMARCA4P51532 1647 aa10.34□□□□□ -0.75
TSPAN6-204ENST00000612152 WIZO95785 1651 aa10.31□□□□□ -0.76
TSPAN6-204ENST00000612152 BAZ1AQ9NRL2 1556 aaPredicted RBP10.21□□□□□ -0.77
TSPAN6-204ENST00000612152 RSF1Q96T23 1441 aaPredicted RBP10.21□□□□□ -0.78
TSPAN6-204ENST00000612152 PEG3Q9GZU2 1588 aa10.2□□□□□ -0.78
TSPAN6-204ENST00000612152 ATAD2BQ9ULI0 1458 aa10.17□□□□□ -0.78
TSPAN6-204ENST00000612152 NCAPD3P42695 1498 aa10.08□□□□□ -0.8
TSPAN6-204ENST00000612152 HMGXB3Q12766 1538 aa10.08□□□□□ -0.8
TSPAN6-204ENST00000612152 SMARCA2P51531 1590 aa10.07□□□□□ -0.8
TSPAN6-204ENST00000612152 TOP2AP11388 1531 aaKnown RBP10.04□□□□□ -0.8
TSPAN6-204ENST00000612152 BAZ1BQ9UIG0 1483 aaKnown RBP10.03□□□□□ -0.8
TSPAN6-204ENST00000612152 NESP48681 1621 aa10□□□□□ -0.81
TSPAN6-204ENST00000612152 SUPT5HO00267 1087 aaKnown RBP9.97□□□□□ -0.81
TSPAN6-204ENST00000612152 CCDC88BA6NC98 1476 aa9.96□□□□□ -0.81
TSPAN6-204ENST00000612152 KIF21AQ7Z4S6 1674 aa9.94□□□□□ -0.82
TSPAN6-204ENST00000612152 PRDM2Q13029 1718 aa9.91□□□□□ -0.82
TSPAN6-204ENST00000612152 DNAJC5Q9H3Z4 198 aa9.85□□□□□ -0.83
TSPAN6-204ENST00000612152 CFTRP13569 1480 aa9.81□□□□□ -0.84
TSPAN6-204ENST00000612152 THOC2Q8NI27 1593 aaKnown RBP9.8□□□□□ -0.84
TSPAN6-204ENST00000612152 LAMC3Q9Y6N6 1575 aa9.8□□□□□ -0.84
TSPAN6-204ENST00000612152 CADPSQ9ULU8 1353 aa9.77□□□□□ -0.85
TSPAN6-204ENST00000612152 ABCC8Q09428 1581 aa9.76□□□□□ -0.85
TSPAN6-204ENST00000612152 URB2Q14146 1524 aaKnown RBP9.72□□□□□ -0.85
TSPAN6-204ENST00000612152 SLC24A1O60721 1099 aa9.71□□□□□ -0.85
TSPAN6-204ENST00000612152 FANCD2Q9BXW9 1451 aa9.71□□□□□ -0.85
TSPAN6-204ENST00000612152 SYNJ1O43426 1573 aa9.7□□□□□ -0.86
TSPAN6-204ENST00000612152 CUX1P39880 1505 aa9.69□□□□□ -0.86
TSPAN6-204ENST00000612152 WDR62O43379 1518 aa9.66□□□□□ -0.86
TSPAN6-204ENST00000612152 CEP164Q9UPV0 1460 aa9.63□□□□□ -0.87
TSPAN6-204ENST00000612152 BIVM-ERCC5R4GMW8 1640 aa9.63□□□□□ -0.87
TSPAN6-204ENST00000612152 ERCC6Q03468 1493 aa9.63□□□□□ -0.87
TSPAN6-204ENST00000612152 WDR97A6NE52 1622 aa9.62□□□□□ -0.87
TSPAN6-204ENST00000612152 CUX2O14529 1486 aa9.62□□□□□ -0.87
TSPAN6-204ENST00000612152 TOPBP1Q92547 1522 aa9.62□□□□□ -0.87
TSPAN6-204ENST00000612152 TARBP1Q13395 1621 aaKnown RBP9.61□□□□□ -0.87
TSPAN6-204ENST00000612152 MRC2Q9UBG0 1479 aa9.6□□□□□ -0.87
TSPAN6-204ENST00000612152 PDS5BQ9NTI5 1447 aa9.6□□□□□ -0.87
TSPAN6-204ENST00000612152 DNMBPQ6XZF7 1577 aa9.59□□□□□ -0.87
TSPAN6-204ENST00000612152 TOP2BQ02880 1626 aa9.59□□□□□ -0.87
TSPAN6-204ENST00000612152 RAD54L2Q9Y4B4 1467 aa9.57□□□□□ -0.88
TSPAN6-204ENST00000612152 CHIC1Q5VXU3 224 aa9.56□□□□□ -0.88
TSPAN6-204ENST00000612152 POLA1P09884 1462 aaPredicted RBP9.56□□□□□ -0.88
TSPAN6-204ENST00000612152 ZNF608Q9ULD9 1512 aaPredicted RBP9.56□□□□□ -0.88
TSPAN6-204ENST00000612152 FGD5Q6ZNL6 1462 aa9.54□□□□□ -0.88
TSPAN6-204ENST00000612152 RUSC2Q8N2Y8 1516 aa9.52□□□□□ -0.89
TSPAN6-204ENST00000612152 EIF4G3O43432 1585 aaKnown RBP9.51□□□□□ -0.89
TSPAN6-204ENST00000612152 WRNQ14191 1432 aaPredicted RBP eCLIP9.51□□□□□ -0.89
TSPAN6-204ENST00000612152 APLP2Q06481 763 aa9.5□□□□□ -0.89
TSPAN6-204ENST00000612152 PBRM1Q86U86 1689 aa9.49□□□□□ -0.89
TSPAN6-204ENST00000612152 ABCA5Q8WWZ7 1642 aa9.49□□□□□ -0.89
TSPAN6-204ENST00000612152 AEBP2Q6ZN18 517 aaPredicted RBP9.47□□□□□ -0.89
TSPAN6-204ENST00000612152 AQRO60306 1485 aaKnown RBP eCLIP9.46□□□□□ -0.9
TSPAN6-204ENST00000612152 SOGA1O94964 1423 aa9.44□□□□□ -0.9
TSPAN6-204ENST00000612152 CHD1O14646 1710 aa9.43□□□□□ -0.9
TSPAN6-204ENST00000612152 ABCA10Q8WWZ4 1543 aa9.42□□□□□ -0.9
TSPAN6-204ENST00000612152 TDRD9Q8NDG6 1382 aaKnown RBP9.41□□□□□ -0.9
TSPAN6-204ENST00000612152 IFT140Q96RY7 1462 aa9.4□□□□□ -0.9
TSPAN6-204ENST00000612152 ADAMTS12P58397 1594 aa9.34□□□□□ -0.91
TSPAN6-204ENST00000612152 SNAPC4Q5SXM2 1469 aa9.34□□□□□ -0.91
TSPAN6-204ENST00000612152 GAPVD1Q14C86 1478 aa9.33□□□□□ -0.92
TSPAN6-204ENST00000612152 TRIM41Q8WV44 630 aa9.33□□□□□ -0.92
TSPAN6-204ENST00000612152 CEP170Q5SW79 1584 aa9.31□□□□□ -0.92
TSPAN6-204ENST00000612152 IGF1RP08069 1367 aa9.3□□□□□ -0.92
TSPAN6-204ENST00000612152 ERICH3Q5RHP9 1530 aa9.28□□□□□ -0.92
TSPAN6-204ENST00000612152 PRKCSHP14314 528 aaPredicted RBP9.28□□□□□ -0.92
TSPAN6-204ENST00000612152 ERCC6L2Q5T890 1561 aa9.27□□□□□ -0.93
TSPAN6-204ENST00000612152 GRIN2BQ13224 1484 aa9.27□□□□□ -0.93
TSPAN6-204ENST00000612152 CUL7Q14999 1698 aa9.25□□□□□ -0.93
TSPAN6-204ENST00000612152 RAPGEF2Q9Y4G8 1499 aa9.24□□□□□ -0.93
TSPAN6-204ENST00000612152 CLASP1Q7Z460 1538 aa9.24□□□□□ -0.93
TSPAN6-204ENST00000612152 FAM9AQ8IZU1 332 aaPredicted RBP9.23□□□□□ -0.93
TSPAN6-204ENST00000612152 PRXQ9BXM0 1461 aa9.23□□□□□ -0.93
TSPAN6-204ENST00000612152 CTTNBP2Q8WZ74 1663 aa9.23□□□□□ -0.93
TSPAN6-204ENST00000612152 MAGI1Q96QZ7 1491 aaPredicted RBP9.23□□□□□ -0.93
TSPAN6-204ENST00000612152 GRIN2AQ12879 1464 aa9.22□□□□□ -0.93
TSPAN6-204ENST00000612152 SYNJ2O15056 1496 aa9.22□□□□□ -0.93
TSPAN6-204ENST00000612152 KIF27Q86VH2 1401 aa9.22□□□□□ -0.93
TSPAN6-204ENST00000612152 SHROOM2Q13796 1616 aa9.2□□□□□ -0.94
TSPAN6-204ENST00000612152 EHMT2Q96KQ7 1210 aa9.2□□□□□ -0.94
TSPAN6-204ENST00000612152 DAXXQ9UER7 740 aaPredicted RBP9.2□□□□□ -0.94
TSPAN6-204ENST00000612152 KIF21BO75037 1637 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms