RNA–Protein interactions for RNA: ENST00000373275.4

BRWD3-201, Transcript of bromodomain and WD repeat domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRWD3, Length 11,381 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD3-201ENST00000373275 MYT1Q01538 1121 aa11.5□□□□□ -0.57
BRWD3-201ENST00000373275 PELP1Q8IZL8 1130 aaKnown RBP11.33□□□□□ -0.6
BRWD3-201ENST00000373275 CCER1Q8TC90 406 aaPredicted RBP10.72□□□□□ -0.69
BRWD3-201ENST00000373275 TTBK1Q5TCY1 1321 aaPredicted RBP10.63□□□□□ -0.71
BRWD3-201ENST00000373275 ERICH6Q7L0X2 663 aa10.6□□□□□ -0.71
BRWD3-201ENST00000373275 CENPBP07199 599 aaPredicted RBP10.6□□□□□ -0.71
BRWD3-201ENST00000373275 YTHDC1Q96MU7 727 aaKnown RBP10.53□□□□□ -0.72
BRWD3-201ENST00000373275 ZEB1P37275 1124 aaPredicted RBP10.42□□□□□ -0.74
BRWD3-201ENST00000373275 NEFLP07196 543 aa10.2□□□□□ -0.78
BRWD3-201ENST00000373275 PCGF6Q9BYE7 350 aa9.99□□□□□ -0.81
BRWD3-201ENST00000373275 DAXXQ9UER7 740 aaPredicted RBP9.99□□□□□ -0.81
BRWD3-201ENST00000373275 APLP2Q06481 763 aa9.98□□□□□ -0.81
BRWD3-201ENST00000373275 RTL5Q5HYW3 569 aaPredicted RBP9.98□□□□□ -0.81
BRWD3-201ENST00000373275 GLIPR1L2Q4G1C9 344 aa9.95□□□□□ -0.82
BRWD3-201ENST00000373275 SUPT5HO00267 1087 aaKnown RBP9.93□□□□□ -0.82
BRWD3-201ENST00000373275 DCAF8L2P0C7V8 631 aa9.88□□□□□ -0.83
BRWD3-201ENST00000373275 MYT1LQ9UL68 1186 aa9.87□□□□□ -0.83
BRWD3-201ENST00000373275 HRCP23327 699 aa9.83□□□□□ -0.84
BRWD3-201ENST00000373275 CLSPNQ9HAW4 1339 aa9.72□□□□□ -0.85
BRWD3-201ENST00000373275 ZNF316A6NFI3 1004 aaPredicted RBP9.71□□□□□ -0.85
BRWD3-201ENST00000373275 TRIM26Q12899 539 aaPredicted RBP9.66□□□□□ -0.86
BRWD3-201ENST00000373275 FAM9AQ8IZU1 332 aaPredicted RBP9.65□□□□□ -0.87
BRWD3-201ENST00000373275 RANGAP1P46060 587 aaPredicted RBP9.57□□□□□ -0.88
BRWD3-201ENST00000373275 EIF5BO60841 1220 aaKnown RBP9.55□□□□□ -0.88
BRWD3-201ENST00000373275 CDK11AQ9UQ88 783 aaPredicted RBP9.54□□□□□ -0.88
BRWD3-201ENST00000373275 DIEXFQ68CQ4 756 aaKnown RBP9.5□□□□□ -0.89
BRWD3-201ENST00000373275 GTF3C3Q9Y5Q9 886 aa9.49□□□□□ -0.89
BRWD3-201ENST00000373275 ANP32BQ92688 251 aaKnown RBP9.47□□□□□ -0.89
BRWD3-201ENST00000373275 ANP32AP39687 249 aaKnown RBP9.46□□□□□ -0.89
BRWD3-201ENST00000373275 TNNT2P45379 298 aaPredicted RBP9.43□□□□□ -0.9
BRWD3-201ENST00000373275 EHMT2Q96KQ7 1210 aa9.42□□□□□ -0.9
BRWD3-201ENST00000373275 NISCHQ9Y2I1 1504 aa9.42□□□□□ -0.9
BRWD3-201ENST00000373275 ACIN1Q9UKV3 1341 aaKnown RBP9.42□□□□□ -0.9
BRWD3-201ENST00000373275 SHROOM4Q9ULL8 1493 aa9.41□□□□□ -0.9
BRWD3-201ENST00000373275 NCLP19338 710 aaKnown RBP9.37□□□□□ -0.91
BRWD3-201ENST00000373275 TRIM41Q8WV44 630 aa9.35□□□□□ -0.91
BRWD3-201ENST00000373275 TRIM44Q96DX7 344 aaPredicted RBP9.32□□□□□ -0.92
BRWD3-201ENST00000373275 ANP32EQ9BTT0 268 aa9.29□□□□□ -0.92
BRWD3-201ENST00000373275 CDK11BP21127 795 aaKnown RBP9.24□□□□□ -0.93
BRWD3-201ENST00000373275 ERICH6BQ5W0A0 696 aa9.24□□□□□ -0.93
BRWD3-201ENST00000373275 UBTFP17480 764 aaKnown RBP9.22□□□□□ -0.93
BRWD3-201ENST00000373275 ANP32CO43423 234 aa9.19□□□□□ -0.94
BRWD3-201ENST00000373275 PPARGC1BQ86YN6 1023 aaKnown RBP9.19□□□□□ -0.94
BRWD3-201ENST00000373275 BCL11AQ9H165 835 aa9.19□□□□□ -0.94
BRWD3-201ENST00000373275 ZBTB47Q9UFB7 747 aaPredicted RBP9.18□□□□□ -0.94
BRWD3-201ENST00000373275 UPF2Q9HAU5 1272 aaKnown RBP9.18□□□□□ -0.94
BRWD3-201ENST00000373275 BCANQ96GW7 911 aa9.15□□□□□ -0.95
BRWD3-201ENST00000373275 HSP90AA1P07900 732 aaKnown RBP9.09□□□□□ -0.95
BRWD3-201ENST00000373275 DDRGK1Q96HY6 314 aa9.09□□□□□ -0.95
BRWD3-201ENST00000373275 POLR3GLQ9BT43 218 aa9.07□□□□□ -0.96
BRWD3-201ENST00000373275 NBR1Q14596 966 aa9.06□□□□□ -0.96
BRWD3-201ENST00000373275 NEFMP07197 916 aa9.05□□□□□ -0.96
BRWD3-201ENST00000373275 PPM1GO15355 546 aaPredicted RBP9.05□□□□□ -0.96
BRWD3-201ENST00000373275 ZNF326Q5BKZ1 582 aaKnown RBP9.04□□□□□ -0.96
BRWD3-201ENST00000373275 ATP1B4Q9UN42 357 aaPredicted RBP9.04□□□□□ -0.96
BRWD3-201ENST00000373275 SCAF1Q9H7N4 1312 aaKnown RBP9.03□□□□□ -0.96
BRWD3-201ENST00000373275 SLC24A1O60721 1099 aa9.03□□□□□ -0.96
BRWD3-201ENST00000373275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.03□□□□□ -0.96
BRWD3-201ENST00000373275 PTMSP20962 102 aa9.02□□□□□ -0.97
BRWD3-201ENST00000373275 BECN1Q14457 450 aa9.02□□□□□ -0.97
BRWD3-201ENST00000373275 FKBP8Q14318 412 aa9.01□□□□□ -0.97
BRWD3-201ENST00000373275 NPM2Q86SE8 214 aaKnown RBP9.01□□□□□ -0.97
BRWD3-201ENST00000373275 CANXP27824 592 aaKnown RBP9□□□□□ -0.97
BRWD3-201ENST00000373275 NAP1L5Q96NT1 182 aaPredicted RBP9□□□□□ -0.97
BRWD3-201ENST00000373275 GOLGA6L22H0YM25 854 aa8.99□□□□□ -0.97
BRWD3-201ENST00000373275 HNRNPUL2Q1KMD3 747 aaKnown RBP8.96□□□□□ -0.97
BRWD3-201ENST00000373275 NEUROD1Q13562 356 aa8.95□□□□□ -0.98
BRWD3-201ENST00000373275 ARID4BQ4LE39 1312 aaPredicted RBP8.94□□□□□ -0.98
BRWD3-201ENST00000373275 CCDC136Q96JN2 1154 aa8.94□□□□□ -0.98
BRWD3-201ENST00000373275 L1TD1Q5T7N2 865 aaKnown RBP8.93□□□□□ -0.98
BRWD3-201ENST00000373275 CHAF1AQ13111 956 aaPredicted RBP8.92□□□□□ -0.98
BRWD3-201ENST00000373275 DCAF1Q9Y4B6 1507 aa8.92□□□□□ -0.98
BRWD3-201ENST00000373275 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.92□□□□□ -0.98
BRWD3-201ENST00000373275 CHIC1Q5VXU3 224 aa8.92□□□□□ -0.98
BRWD3-201ENST00000373275 RSPH6AQ9H0K4 717 aa8.91□□□□□ -0.98
BRWD3-201ENST00000373275 DNTTIP2Q5QJE6 756 aaKnown RBP8.9□□□□□ -0.99
BRWD3-201ENST00000373275 NOP58Q9Y2X3 529 aaKnown RBP8.88□□□□□ -0.99
BRWD3-201ENST00000373275 TNNT3P45378 269 aaPredicted RBP8.87□□□□□ -0.99
BRWD3-201ENST00000373275 ITGAEP38570 1179 aa8.87□□□□□ -0.99
BRWD3-201ENST00000373275 PTMAP06454 111 aaKnown RBP8.86□□□□□ -0.99
BRWD3-201ENST00000373275 NRDCO43847 1150 aa8.86□□□□□ -0.99
BRWD3-201ENST00000373275 CNGB1Q14028 1251 aaPredicted RBP8.86□□□□□ -0.99
BRWD3-201ENST00000373275 DEKP35659 375 aaKnown RBP8.85□□□□□ -0.99
BRWD3-201ENST00000373275 MSNP26038 577 aaKnown RBP8.84□□□□□ -0.99
BRWD3-201ENST00000373275 GOLGA6L6A8MZA4 724 aa8.84□□□□□ -0.99
BRWD3-201ENST00000373275 CALRP27797 417 aaKnown RBP8.83□□□□□ -1
BRWD3-201ENST00000373275 HNRNPUQ00839 825 aaKnown RBP eCLIP8.83□□□□□ -1
BRWD3-201ENST00000373275 PNNQ9H307 717 aaKnown RBP8.82□□□□□ -1
BRWD3-201ENST00000373275 LOC105371045A0A1W2PR82 267 aa8.82□□□□□ -1
BRWD3-201ENST00000373275 HSP90AA2PQ14568 343 aaPredicted RBP8.82□□□□□ -1
BRWD3-201ENST00000373275 CCDC180Q9P1Z9 1646 aa8.81□□□□□ -1
BRWD3-201ENST00000373275 USP35Q9P2H5 1018 aa8.8□□□□□ -1
BRWD3-201ENST00000373275 LAS1LQ9Y4W2 734 aaKnown RBP8.8□□□□□ -1
BRWD3-201ENST00000373275 ARXQ96QS3 562 aa8.8□□□□□ -1
BRWD3-201ENST00000373275 SLC4A1APQ9BWU0 796 aaKnown RBP8.79□□□□□ -1
BRWD3-201ENST00000373275 RTN4Q9NQC3 1192 aaKnown RBP8.78□□□□□ -1
BRWD3-201ENST00000373275 A0A0U1RQG5 324 aaPredicted RBP8.77□□□□□ -1
BRWD3-201ENST00000373275 ZRSR1Q15695 479 aaKnown RBP8.77□□□□□ -1.01
BRWD3-201ENST00000373275 GOLGA6L3A6NEY3 463 aa8.73□□□□□ -1.01
BRWD3-201ENST00000373275 SETQ01105 290 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms