RNA–Protein interactions for RNA: ENST00000396123.2

GREB1-206, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-206ENST00000396123 DCAF8L2P0C7V8 631 aa22.62■■□□□ 1.21
GREB1-206ENST00000396123 NISCHQ9Y2I1 1504 aa22.38■■□□□ 1.17
GREB1-206ENST00000396123 SUPT5HO00267 1087 aaKnown RBP21.76■■□□□ 1.07
GREB1-206ENST00000396123 SHROOM4Q9ULL8 1493 aa21.43■■□□□ 1.02
GREB1-206ENST00000396123 EHMT2Q96KQ7 1210 aa20.82■□□□□ 0.92
GREB1-206ENST00000396123 FAM9AQ8IZU1 332 aaPredicted RBP20.45■□□□□ 0.86
GREB1-206ENST00000396123 APLP2Q06481 763 aa20.44■□□□□ 0.86
GREB1-206ENST00000396123 PCGF6Q9BYE7 350 aa20.4■□□□□ 0.86
GREB1-206ENST00000396123 PELP1Q8IZL8 1130 aaKnown RBP20.26■□□□□ 0.83
GREB1-206ENST00000396123 TRIM41Q8WV44 630 aa20.19■□□□□ 0.82
GREB1-206ENST00000396123 TTBK1Q5TCY1 1321 aaPredicted RBP20.14■□□□□ 0.82
GREB1-206ENST00000396123 ZEB1P37275 1124 aaPredicted RBP20.06■□□□□ 0.8
GREB1-206ENST00000396123 CCER1Q8TC90 406 aaPredicted RBP19.92■□□□□ 0.78
GREB1-206ENST00000396123 RANGAP1P46060 587 aaPredicted RBP19.9■□□□□ 0.78
GREB1-206ENST00000396123 CENPBP07199 599 aaPredicted RBP19.84■□□□□ 0.77
GREB1-206ENST00000396123 UBTFP17480 764 aaKnown RBP19.84■□□□□ 0.77
GREB1-206ENST00000396123 ATP1B4Q9UN42 357 aaPredicted RBP19.66■□□□□ 0.74
GREB1-206ENST00000396123 TRIM26Q12899 539 aaPredicted RBP19.64■□□□□ 0.73
GREB1-206ENST00000396123 CHIC1Q5VXU3 224 aa19.6■□□□□ 0.73
GREB1-206ENST00000396123 PPARGC1BQ86YN6 1023 aaKnown RBP19.56■□□□□ 0.72
GREB1-206ENST00000396123 HRCP23327 699 aa19.52■□□□□ 0.71
GREB1-206ENST00000396123 LOC105371045A0A1W2PR82 267 aa19.49■□□□□ 0.71
GREB1-206ENST00000396123 YTHDC1Q96MU7 727 aaKnown RBP19.39■□□□□ 0.69
GREB1-206ENST00000396123 ERICH6Q7L0X2 663 aa19.34■□□□□ 0.69
GREB1-206ENST00000396123 NEFLP07196 543 aa19.3■□□□□ 0.68
GREB1-206ENST00000396123 ITGAEP38570 1179 aa19.15■□□□□ 0.66
GREB1-206ENST00000396123 HNRNPUL2Q1KMD3 747 aaKnown RBP19.14■□□□□ 0.65
GREB1-206ENST00000396123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19■□□□□ 0.63
GREB1-206ENST00000396123 MYT1Q01538 1121 aa18.99■□□□□ 0.63
GREB1-206ENST00000396123 ABCC9O60706 1549 aa18.95■□□□□ 0.62
GREB1-206ENST00000396123 DIEXFQ68CQ4 756 aaKnown RBP18.87■□□□□ 0.61
GREB1-206ENST00000396123 PABPN1Q86U42 306 aaKnown RBP eCLIP18.85■□□□□ 0.611e-6■■□□□ 12.3
GREB1-206ENST00000396123 MYT1LQ9UL68 1186 aa18.84■□□□□ 0.61
GREB1-206ENST00000396123 POLR3GLQ9BT43 218 aa18.83■□□□□ 0.6
GREB1-206ENST00000396123 FAM50AQ14320 339 aaKnown RBP18.71■□□□□ 0.59
GREB1-206ENST00000396123 CNGB1Q14028 1251 aaPredicted RBP18.65■□□□□ 0.58
GREB1-206ENST00000396123 DAXXQ9UER7 740 aaPredicted RBP18.58■□□□□ 0.56
GREB1-206ENST00000396123 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.56
GREB1-206ENST00000396123 CSRNP3Q8WYN3 585 aa18.57■□□□□ 0.56
GREB1-206ENST00000396123 NEUROD1Q13562 356 aa18.56■□□□□ 0.56
GREB1-206ENST00000396123 TRIM52Q96A61 297 aa18.55■□□□□ 0.56
GREB1-206ENST00000396123 ZNF316A6NFI3 1004 aaPredicted RBP18.5■□□□□ 0.55
GREB1-206ENST00000396123 GTF3C3Q9Y5Q9 886 aa18.46■□□□□ 0.55
GREB1-206ENST00000396123 ANP32CO43423 234 aa18.4■□□□□ 0.54
GREB1-206ENST00000396123 SCRIBQ14160 1630 aa18.39■□□□□ 0.53
GREB1-206ENST00000396123 DCAF1Q9Y4B6 1507 aa18.38■□□□□ 0.53
GREB1-206ENST00000396123 SLC4A1APQ9BWU0 796 aaKnown RBP18.36■□□□□ 0.53
GREB1-206ENST00000396123 P3H3Q8IVL6 736 aa18.31■□□□□ 0.52
GREB1-206ENST00000396123 BCANQ96GW7 911 aa18.29■□□□□ 0.52
GREB1-206ENST00000396123 ACIN1Q9UKV3 1341 aaKnown RBP18.29■□□□□ 0.52
GREB1-206ENST00000396123 ZNF326Q5BKZ1 582 aaKnown RBP18.29■□□□□ 0.52
GREB1-206ENST00000396123 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.52
GREB1-206ENST00000396123 CLSPNQ9HAW4 1339 aa18.25■□□□□ 0.51
GREB1-206ENST00000396123 FBLN2P98095 1184 aa18.24■□□□□ 0.51
GREB1-206ENST00000396123 RTL5Q5HYW3 569 aaPredicted RBP18.24■□□□□ 0.51
GREB1-206ENST00000396123 CDK11AQ9UQ88 783 aaPredicted RBP18.16■□□□□ 0.5
GREB1-206ENST00000396123 ARID3CA6NKF2 412 aa18.14■□□□□ 0.49
GREB1-206ENST00000396123 ZNF777Q9ULD5 760 aaPredicted RBP18.04■□□□□ 0.48
GREB1-206ENST00000396123 TONSLQ96HA7 1378 aa18.03■□□□□ 0.48
GREB1-206ENST00000396123 MYO15BQ96JP2 1530 aa18.02■□□□□ 0.47
GREB1-206ENST00000396123 RSF1Q96T23 1441 aaPredicted RBP18■□□□□ 0.47
GREB1-206ENST00000396123 DDX10Q13206 875 aaKnown RBP17.94■□□□□ 0.46
GREB1-206ENST00000396123 CLIP1P30622 1438 aa17.93■□□□□ 0.46
GREB1-206ENST00000396123 CANXP27824 592 aaKnown RBP17.89■□□□□ 0.46
GREB1-206ENST00000396123 FKBP8Q14318 412 aa17.89■□□□□ 0.46
GREB1-206ENST00000396123 EEA1Q15075 1411 aa17.89■□□□□ 0.45
GREB1-206ENST00000396123 HNRNPUQ00839 825 aaKnown RBP eCLIP17.86■□□□□ 0.45
GREB1-206ENST00000396123 ZBTB47Q9UFB7 747 aaPredicted RBP17.86■□□□□ 0.45
GREB1-206ENST00000396123 RB1CC1Q8TDY2 1594 aa17.85■□□□□ 0.45
GREB1-206ENST00000396123 CHIC2Q9UKJ5 165 aa17.84■□□□□ 0.45
GREB1-206ENST00000396123 CEP162Q5TB80 1403 aa17.84■□□□□ 0.45
GREB1-206ENST00000396123 GOLGA3Q08378 1498 aa17.82■□□□□ 0.44
GREB1-206ENST00000396123 ANP32AP39687 249 aaKnown RBP17.82■□□□□ 0.44
GREB1-206ENST00000396123 NEFMP07197 916 aa17.82■□□□□ 0.44
GREB1-206ENST00000396123 MTUS2Q5JR59 1369 aa17.8■□□□□ 0.44
GREB1-206ENST00000396123 FAM9BQ8IZU0 186 aa17.79■□□□□ 0.44
GREB1-206ENST00000396123 MIER1Q8N108 512 aa17.79■□□□□ 0.44
GREB1-206ENST00000396123 NACADO15069 1562 aa17.76■□□□□ 0.43
GREB1-206ENST00000396123 WRNQ14191 1432 aaPredicted RBP eCLIP17.76■□□□□ 0.43
GREB1-206ENST00000396123 TNIKQ9UKE5 1360 aa17.73■□□□□ 0.43
GREB1-206ENST00000396123 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
GREB1-206ENST00000396123 TSPY4P0CV99 314 aa17.69■□□□□ 0.42
GREB1-206ENST00000396123 TSPY10P0CW01 314 aa17.69■□□□□ 0.42
GREB1-206ENST00000396123 NPM2Q86SE8 214 aaKnown RBP17.69■□□□□ 0.42
GREB1-206ENST00000396123 ESF1Q9H501 851 aaKnown RBP17.69■□□□□ 0.42
GREB1-206ENST00000396123 TMC1Q8TDI8 760 aa17.69■□□□□ 0.42
GREB1-206ENST00000396123 SLC24A1O60721 1099 aa17.68■□□□□ 0.42
GREB1-206ENST00000396123 BCL11AQ9H165 835 aa17.67■□□□□ 0.42
GREB1-206ENST00000396123 CHGAP10645 457 aaKnown RBP17.67■□□□□ 0.42
GREB1-206ENST00000396123 MRS2Q9HD23 443 aa17.66■□□□□ 0.42
GREB1-206ENST00000396123 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
GREB1-206ENST00000396123 HIRIP3Q9BW71 556 aaPredicted RBP17.65■□□□□ 0.42
GREB1-206ENST00000396123 NPM1P06748 294 aaKnown RBP eCLIP17.64■□□□□ 0.42
GREB1-206ENST00000396123 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.64■□□□□ 0.416e-9■■□□□ 11.6
GREB1-206ENST00000396123 BAZ1BQ9UIG0 1483 aaKnown RBP17.64■□□□□ 0.41
GREB1-206ENST00000396123 SALL2Q9Y467 1007 aaPredicted RBP17.63■□□□□ 0.41
GREB1-206ENST00000396123 EIF4G2P78344 907 aaKnown RBP eCLIP17.63■□□□□ 0.41
GREB1-206ENST00000396123 RRP7BPQ9NSQ0 103 aa17.62■□□□□ 0.41
GREB1-206ENST00000396123 KIF27Q86VH2 1401 aa17.61■□□□□ 0.41
GREB1-206ENST00000396123 CHMP7Q8WUX9 453 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms