RNA–Protein interactions for RNA: ENST00000415645.6

NPIPB4-203, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPIPB4, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-203ENST00000415645 NISCHQ9Y2I1 1504 aa17.09■□□□□ 0.33
NPIPB4-203ENST00000415645 CCDC180Q9P1Z9 1646 aa16.25■□□□□ 0.19
NPIPB4-203ENST00000415645 MYO15BQ96JP2 1530 aa15.43■□□□□ 0.06
NPIPB4-203ENST00000415645 DCAF1Q9Y4B6 1507 aa15.34■□□□□ 0.05
NPIPB4-203ENST00000415645 UNC13AQ9UPW8 1703 aa14.7□□□□□ -0.06
NPIPB4-203ENST00000415645 ZCCHC6Q5VYS8 1495 aaKnown RBP14.68□□□□□ -0.06
NPIPB4-203ENST00000415645 SHROOM4Q9ULL8 1493 aa14.58□□□□□ -0.08
NPIPB4-203ENST00000415645 NACADO15069 1562 aa14.34□□□□□ -0.11
NPIPB4-203ENST00000415645 PEG3Q9GZU2 1588 aa14.18□□□□□ -0.14
NPIPB4-203ENST00000415645 DCAF8L2P0C7V8 631 aa14.15□□□□□ -0.14
NPIPB4-203ENST00000415645 BICRAQ9NZM4 1560 aa14.06□□□□□ -0.16
NPIPB4-203ENST00000415645 PRDM2Q13029 1718 aa13.96□□□□□ -0.18
NPIPB4-203ENST00000415645 EIF4G1Q04637 1599 aaKnown RBP13.89□□□□□ -0.19
NPIPB4-203ENST00000415645 RB1CC1Q8TDY2 1594 aa13.86□□□□□ -0.19
NPIPB4-203ENST00000415645 ABCC9O60706 1549 aa13.86□□□□□ -0.19
NPIPB4-203ENST00000415645 SMARCA2P51531 1590 aa13.62□□□□□ -0.23
NPIPB4-203ENST00000415645 HMGXB3Q12766 1538 aa13.43□□□□□ -0.26
NPIPB4-203ENST00000415645 BAZ1AQ9NRL2 1556 aaPredicted RBP13.42□□□□□ -0.26
NPIPB4-203ENST00000415645 SMARCA4P51532 1647 aa13.37□□□□□ -0.27
NPIPB4-203ENST00000415645 SUPT5HO00267 1087 aaKnown RBP13.34□□□□□ -0.27
NPIPB4-203ENST00000415645 WDR97A6NE52 1622 aa13.23□□□□□ -0.29
NPIPB4-203ENST00000415645 SCRIBQ14160 1630 aa13.16□□□□□ -0.3
NPIPB4-203ENST00000415645 TOP2AP11388 1531 aaKnown RBP13.09□□□□□ -0.31
NPIPB4-203ENST00000415645 BIVM-ERCC5R4GMW8 1640 aa13.08□□□□□ -0.32
NPIPB4-203ENST00000415645 NCAPD3P42695 1498 aa12.96□□□□□ -0.34
NPIPB4-203ENST00000415645 PABPN1Q86U42 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
NPIPB4-203ENST00000415645 WIZO95785 1651 aa12.84□□□□□ -0.35
NPIPB4-203ENST00000415645 MROH2BQ7Z745 1585 aa12.82□□□□□ -0.36
NPIPB4-203ENST00000415645 THOC2Q8NI27 1593 aaKnown RBP12.75□□□□□ -0.37
NPIPB4-203ENST00000415645 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
NPIPB4-203ENST00000415645 CC2D2AQ9P2K1 1620 aa12.71□□□□□ -0.37
NPIPB4-203ENST00000415645 RSF1Q96T23 1441 aaPredicted RBP12.69□□□□□ -0.38
NPIPB4-203ENST00000415645 ATAD2BQ9ULI0 1458 aa12.68□□□□□ -0.38
NPIPB4-203ENST00000415645 SLC24A1O60721 1099 aa12.66□□□□□ -0.38
NPIPB4-203ENST00000415645 EHMT2Q96KQ7 1210 aa12.6□□□□□ -0.39
NPIPB4-203ENST00000415645 TOP2BQ02880 1626 aa12.6□□□□□ -0.39
NPIPB4-203ENST00000415645 TARBP1Q13395 1621 aaKnown RBP12.58□□□□□ -0.4
NPIPB4-203ENST00000415645 ABCA5Q8WWZ7 1642 aa12.58□□□□□ -0.4
NPIPB4-203ENST00000415645 WDR62O43379 1518 aa12.55□□□□□ -0.4
NPIPB4-203ENST00000415645 CECR2Q9BXF3 1484 aa12.54□□□□□ -0.4
NPIPB4-203ENST00000415645 CFTRP13569 1480 aa12.52□□□□□ -0.41
NPIPB4-203ENST00000415645 KIF21AQ7Z4S6 1674 aa12.52□□□□□ -0.41
NPIPB4-203ENST00000415645 BAZ1BQ9UIG0 1483 aaKnown RBP12.5□□□□□ -0.41
NPIPB4-203ENST00000415645 FAM9AQ8IZU1 332 aaPredicted RBP12.46□□□□□ -0.42
NPIPB4-203ENST00000415645 SHROOM2Q13796 1616 aa12.42□□□□□ -0.42
NPIPB4-203ENST00000415645 PBRM1Q86U86 1689 aa12.39□□□□□ -0.43
NPIPB4-203ENST00000415645 CHIC1Q5VXU3 224 aa12.35□□□□□ -0.43
NPIPB4-203ENST00000415645 KIF21BO75037 1637 aa12.34□□□□□ -0.43
NPIPB4-203ENST00000415645 DNMBPQ6XZF7 1577 aa12.33□□□□□ -0.44
NPIPB4-203ENST00000415645 TRIM41Q8WV44 630 aa12.31□□□□□ -0.44
NPIPB4-203ENST00000415645 CUL7Q14999 1698 aa12.29□□□□□ -0.44
NPIPB4-203ENST00000415645 CCDC88BA6NC98 1476 aa12.28□□□□□ -0.44
NPIPB4-203ENST00000415645 PELP1Q8IZL8 1130 aaKnown RBP12.26□□□□□ -0.45
NPIPB4-203ENST00000415645 CTTNBP2Q8WZ74 1663 aa12.26□□□□□ -0.45
NPIPB4-203ENST00000415645 SYNJ1O43426 1573 aa12.23□□□□□ -0.45
NPIPB4-203ENST00000415645 MYT1Q01538 1121 aa12.23□□□□□ -0.45
NPIPB4-203ENST00000415645 ERICH3Q5RHP9 1530 aa12.22□□□□□ -0.45
NPIPB4-203ENST00000415645 LOC105371045A0A1W2PR82 267 aa12.2□□□□□ -0.46
NPIPB4-203ENST00000415645 SAMD9Q5K651 1589 aa12.19□□□□□ -0.46
NPIPB4-203ENST00000415645 LRRIQ1Q96JM4 1722 aa12.18□□□□□ -0.46
NPIPB4-203ENST00000415645 CUX1P39880 1505 aa12.15□□□□□ -0.46
NPIPB4-203ENST00000415645 ABCC8Q09428 1581 aa12.15□□□□□ -0.46
NPIPB4-203ENST00000415645 RANGAP1P46060 587 aaPredicted RBP12.12□□□□□ -0.47
NPIPB4-203ENST00000415645 ABCA10Q8WWZ4 1543 aa12.11□□□□□ -0.47
NPIPB4-203ENST00000415645 ADCY10Q96PN6 1610 aa12.06□□□□□ -0.48
NPIPB4-203ENST00000415645 ADAMTS12P58397 1594 aa12.06□□□□□ -0.48
NPIPB4-203ENST00000415645 CLASP1Q7Z460 1538 aa12.04□□□□□ -0.48
NPIPB4-203ENST00000415645 BCORL1Q5H9F3 1711 aa12.03□□□□□ -0.48
NPIPB4-203ENST00000415645 TTBK1Q5TCY1 1321 aaPredicted RBP12.02□□□□□ -0.49
NPIPB4-203ENST00000415645 CFAP43Q8NDM7 1665 aa12.01□□□□□ -0.49
NPIPB4-203ENST00000415645 PRKCSHP14314 528 aaPredicted RBP12.01□□□□□ -0.49
NPIPB4-203ENST00000415645 PCGF6Q9BYE7 350 aa12□□□□□ -0.49
NPIPB4-203ENST00000415645 URB2Q14146 1524 aaKnown RBP11.99□□□□□ -0.49
NPIPB4-203ENST00000415645 RUSC2Q8N2Y8 1516 aa11.98□□□□□ -0.49
NPIPB4-203ENST00000415645 PPARGC1BQ86YN6 1023 aaKnown RBP11.96□□□□□ -0.5
NPIPB4-203ENST00000415645 CUX2O14529 1486 aa11.95□□□□□ -0.5
NPIPB4-203ENST00000415645 MAP3K1Q13233 1512 aa11.95□□□□□ -0.5
NPIPB4-203ENST00000415645 UBTFP17480 764 aaKnown RBP11.94□□□□□ -0.5
NPIPB4-203ENST00000415645 EIF4G3O43432 1585 aaKnown RBP11.92□□□□□ -0.5
NPIPB4-203ENST00000415645 DNAJC5BQ9UF47 199 aa11.91□□□□□ -0.5
NPIPB4-203ENST00000415645 NESP48681 1621 aa11.91□□□□□ -0.5
NPIPB4-203ENST00000415645 PRXQ9BXM0 1461 aa11.9□□□□□ -0.5
NPIPB4-203ENST00000415645 TOPBP1Q92547 1522 aa11.89□□□□□ -0.51
NPIPB4-203ENST00000415645 ARHGEF11O15085 1522 aa11.88□□□□□ -0.51
NPIPB4-203ENST00000415645 KDM5BQ9UGL1 1544 aa11.86□□□□□ -0.51
NPIPB4-203ENST00000415645 MRC2Q9UBG0 1479 aa11.84□□□□□ -0.51
NPIPB4-203ENST00000415645 CADPSQ9ULU8 1353 aa11.83□□□□□ -0.52
NPIPB4-203ENST00000415645 EEA1Q15075 1411 aa11.83□□□□□ -0.52
NPIPB4-203ENST00000415645 UGGT2Q9NYU1 1516 aa11.81□□□□□ -0.52
NPIPB4-203ENST00000415645 CHD1O14646 1710 aa11.81□□□□□ -0.52
NPIPB4-203ENST00000415645 CROCC2H7BZ55 1655 aa11.76□□□□□ -0.53
NPIPB4-203ENST00000415645 AQRO60306 1485 aaKnown RBP eCLIP11.75□□□□□ -0.53
NPIPB4-203ENST00000415645 EFCAB5A4FU69 1503 aa11.73□□□□□ -0.53
NPIPB4-203ENST00000415645 WRNQ14191 1432 aaPredicted RBP eCLIP11.72□□□□□ -0.53
NPIPB4-203ENST00000415645 CSRNP3Q8WYN3 585 aa11.72□□□□□ -0.53
NPIPB4-203ENST00000415645 POLA1P09884 1462 aaPredicted RBP11.72□□□□□ -0.53
NPIPB4-203ENST00000415645 HRCP23327 699 aa11.72□□□□□ -0.53
NPIPB4-203ENST00000415645 ATP1B4Q9UN42 357 aaPredicted RBP11.72□□□□□ -0.53
NPIPB4-203ENST00000415645 IQGAP2Q13576 1575 aa11.71□□□□□ -0.53
NPIPB4-203ENST00000415645 APLP2Q06481 763 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms