Protein–RNA interactions for Protein: O00213

APBB1, Amyloid-beta A4 precursor protein-binding family B member 1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBB1O00213 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.34■■■□□ 2.45
APBB1O00213 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
APBB1O00213 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC30.33■■■□□ 2.45
APBB1O00213 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
APBB1O00213 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
APBB1O00213 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.32■■■□□ 2.44
APBB1O00213 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC30.32■■■□□ 2.44
APBB1O00213 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC30.31■■■□□ 2.44
APBB1O00213 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC30.31■■■□□ 2.44
APBB1O00213 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
APBB1O00213 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
APBB1O00213 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
APBB1O00213 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.3■■■□□ 2.44
APBB1O00213 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.3■■■□□ 2.44
APBB1O00213 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
APBB1O00213 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
APBB1O00213 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.29■■■□□ 2.44
APBB1O00213 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
APBB1O00213 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
APBB1O00213 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
APBB1O00213 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
APBB1O00213 HSD17B1P1-201ENST00000590052 955 ntBASIC30.28■■■□□ 2.44
APBB1O00213 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.28■■■□□ 2.44
APBB1O00213 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
APBB1O00213 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
APBB1O00213 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.27■■■□□ 2.44
APBB1O00213 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.27■■■□□ 2.44
APBB1O00213 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.27■■■□□ 2.44
APBB1O00213 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
APBB1O00213 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC30.26■■■□□ 2.44
APBB1O00213 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
APBB1O00213 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
APBB1O00213 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC30.26■■■□□ 2.43
APBB1O00213 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
APBB1O00213 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
APBB1O00213 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.26■■■□□ 2.43
APBB1O00213 SMPD5-203ENST00000639008 1464 ntBASIC30.25■■■□□ 2.43
APBB1O00213 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.25■■■□□ 2.43
APBB1O00213 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.25■■■□□ 2.43
APBB1O00213 ECEL1P2-201ENST00000461596 1295 ntBASIC30.24■■■□□ 2.43
APBB1O00213 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.24■■■□□ 2.43
APBB1O00213 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC30.22■■■□□ 2.43
APBB1O00213 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
APBB1O00213 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
APBB1O00213 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
APBB1O00213 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.22■■■□□ 2.43
APBB1O00213 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
APBB1O00213 AC091060.1-201ENST00000623524 1766 ntBASIC30.22■■■□□ 2.43
APBB1O00213 AC025884.2-201ENST00000553429 711 ntBASIC30.21■■■□□ 2.43
APBB1O00213 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
APBB1O00213 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.2■■■□□ 2.43
APBB1O00213 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
APBB1O00213 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.2■■■□□ 2.42
APBB1O00213 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
APBB1O00213 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
APBB1O00213 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
APBB1O00213 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
APBB1O00213 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.19■■■□□ 2.42
APBB1O00213 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
APBB1O00213 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
APBB1O00213 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
APBB1O00213 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
APBB1O00213 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
APBB1O00213 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
APBB1O00213 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
APBB1O00213 RNF126P1-201ENST00000567452 1320 ntBASIC30.18■■■□□ 2.42
APBB1O00213 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
APBB1O00213 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.17■■■□□ 2.42
APBB1O00213 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC30.17■■■□□ 2.42
APBB1O00213 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC30.17■■■□□ 2.42
APBB1O00213 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
APBB1O00213 ERN1-208ENST00000606895 2068 ntBASIC30.17■■■□□ 2.42
APBB1O00213 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
APBB1O00213 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
APBB1O00213 AC092803.2-201ENST00000564287 1899 ntBASIC30.16■■■□□ 2.42
APBB1O00213 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.16■■■□□ 2.42
APBB1O00213 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
APBB1O00213 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.16■■■□□ 2.42
APBB1O00213 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
APBB1O00213 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
APBB1O00213 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
APBB1O00213 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
APBB1O00213 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.14■■■□□ 2.42
APBB1O00213 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.42
APBB1O00213 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.14■■■□□ 2.42
APBB1O00213 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.14■■■□□ 2.42
APBB1O00213 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
APBB1O00213 REST-210ENST00000638187 1334 ntTSL 5 BASIC30.14■■■□□ 2.42
APBB1O00213 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.14■■■□□ 2.42
APBB1O00213 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
APBB1O00213 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
APBB1O00213 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC30.13■■■□□ 2.41
APBB1O00213 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC30.13■■■□□ 2.41
APBB1O00213 CREM-210ENST00000374721 2020 ntTSL 5 BASIC30.13■■■□□ 2.41
APBB1O00213 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.13■■■□□ 2.41
APBB1O00213 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC30.13■■■□□ 2.41
APBB1O00213 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
APBB1O00213 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
APBB1O00213 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.12■■■□□ 2.41
APBB1O00213 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms